New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2521046 =	52 (0.840)	3 (0.050)	3/250	NT	6.0%	coding (2297/4446 nt)	PP_2212	leucine‑rich repeat‑containing protein
	?	NC_002947	2521074 =	45 (0.770)					coding (2325/4446 nt)	PP_2212	leucine‑rich repeat‑containing protein

TGAGCCGGGGGCTGGCGGGGTTGTATCTGAGCACGGCGTACAGTGATGTCACCGGCGAACTGGCCCTTGCGTTGCTGGATAGCTTCGAACTCGAGCAACTTGACCTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGACGAGCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGAC  >  NC_002947/2520899‑2521193                                                                                                                                                     |                                                                                                                                                     cagttgcatcgctgcccgctgctctgatgtcagtgcggcagaaagcgcctcgaagatacatcccggctcgtcagcgataaacacgtgtggcaaacctgacccgttgtagatcagaaacctgccttcatgcctgaccactattcttcttg                                                                                                                                                      <  5:122490‑M1/1‑1 (MQ=255)   gttgcatcgctgcccgctgctctgatgtcagtgcggcagaaagcgcctcgaagatacatcccggctcgtcagcgataaacacgtgtggcaaacctgacccgttgtagatcagaaacctgccttcatgcctgaccactattcttcttGcc                                                                                                                                                    <  1:41674‑M1/3‑1 (MQ=255)   gttgcatcgctgcccgctgctctgatgtcagtgcggcagaaagcgcctcgaagatacatcccggctcgtcagcgataaacacgtgtggcaaacctgaccagttgtagatcagaaacctgccttcatgcctgaccactattcttcttGcc                                                                                                                                                    >  1:91879‑M1/147‑149 (MQ=255)     ccGGGGGCTGGCGGGGTTGTATCTGAGCACGGCGTACAGTGATGTCACCGGCGAACTGGCCCTTGCGTTGCTGGATAGCTTCGAACTCGAGCAACTTGACCTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCg                                                                                                                                                 >  4:62051/1‑149 (MQ=255)       catcgctgcccgctgctctgatgtcagtgcggcagaaagcgcctcgaagatacatcccggctcgtcagcgataaacacgtgtggcaaacctgacccgttgtagatcagaaacctgccttcatgcctgaccactattcttcttGCCTCgg                                                                                                                                                <  3:25230‑M1/7‑1 (MQ=255)               gCGGGGTTGTATCTGAGCACGGCGTACTGTGATGTCACCGGCTAACTGGCCCTTGCGTTGCTGGAGAGCTTCGAACTGGAGCAAGTTGACCTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGcggcgg                                                                                                                                       <  4:133392/149‑1 (MQ=255)                     ttGTATCTGAGCACGGCGTACAGTGATGTCACCGGCGAACTGGCCCTTGCGTTGCTGGATAGCTTCGAACTCGAGCAACTTGACCTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑Ac                                                                                                                                >  7:331324/1‑149 (MQ=255)                       gTATCTGAGCACGGCGTACAGTGATGTGACCGGCGAACTGGCCCTTGCGTGGCGGGATAGCTTCGAGCTCGAGCAACTTGACGTCGACGTGCGCGAGCGCGGGGGGGATGGGCGGTCGATCA‑GGCGCGTCGGGAGGGGCGGGCGG‑ACCg                                                                                                                              >  6:228318/1‑149 (MQ=255)                       gTATCTGAGCACGGCGTACAGTGATGTCACCGGCGAACTGGCCCTTGCGTTGCTGGATAGCTTCGAACTCGAGCAACTTGACCTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑Acc                                                                                                                               <  4:92477/148‑1 (MQ=255)                        tATCTGAGCACGGCGTACAGTGATGTCACCGGCGAACTGGCCCTTGCGTTGCTGGATAGCTTCGAACTCGAGCAACTTGACCTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑Acc                                                                                                                               >  8:35744/1‑147 (MQ=255)                        tATCTGAGCACGGCGTACAGTGATGTCACCGGCGAACTGGCCCTTGCGTTGCTGGATAGCTTCGAACTCGAGCAACTTGACCTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGa                                                                                                                             <  3:62051/149‑1 (MQ=255)                          tCTGAGCACGGCGTACAGTGATGTCACCGGCGAACTGGCCCTTGCGTTGCTGGATAGCTTCGAACTCGAGCAACTTGACCTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAgg                                                                                                                           >  2:8694/1‑149 (MQ=255)                             gAGCACGGCGTACAGTGATGTCACCGGCGAACTGGCCCTTGCGTTGCTGGATAGCTTCGAACTCGAGCAACTTGACCTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGc                                                                                                                          >  8:221085/1‑147 (MQ=255)                              aGCACGGCGTACAGTGATGTCACCGGCGAACTGGCCCTTGCGTTGCTGGATAGCTTCGAACTCGAGCAACTTGACCTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCaag                                                                                                                       <  1:299992/149‑1 (MQ=255)                                  cGGCGTACAGTGATGTCACCGGCGAACTGGCCCTTGCGTTGCTGGATAGCTTCGAACTCGAGCAACTTGACCTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCAGGGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCaagaag                                                                                                                    <  1:260403/149‑1 (MQ=255)                                   ggCGTACAGTGATGTCACCGGCGAACTGGCCCTTGCGTTGCTGGATAGCTTCGAACTCGAGCAACTTGACCTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAgaagaa                                                                                                                  <  8:327518/149‑1 (MQ=255)                                       tACAGTGATGTCACCGGCGAACTGGCCCTTGCGTTGCTGGATAGCTTCGAACTCGAGCAACTTGACCTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGt                                                                                                              <  3:323190/149‑1 (MQ=255)                                            tGATGTCACCGGCGAACTGGCCCTTGCGTTGCTGGATAGCTTCGAACTCGAGCAACTTGACCTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCa                                                                                                         <  4:147080/149‑1 (MQ=255)                                              aTGTCACCGGCGAACTGGCCCTTGCGTTGCTGGATAGCTTCGAACTCGAGCAACTTGACCTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAg                                                                                                        <  7:35744/148‑1 (MQ=255)                                                gTCACCGGCGAACTGGCCCTTGCGTTGCTGGATAGCTTCGAACTCGAGCAACTTGACCTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCa                                                                                                     >  6:122490/1‑149 (MQ=255)                                                   aCCGGCGAACTGGCCCTTGCGTTGCTGGATAGCTTCGAACTCGAGCAACTTGACCTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATg                                                                                                   <  8:331324/148‑1 (MQ=255)                                                   aCCGGCGAACTGGCCCTTGCGTTGCTGGATAGCTTCGAACTCGAGCAACTTGACCTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATg                                                                                                   >  2:40238/1‑148 (MQ=255)                                                    ccGGCGAACTGGCCCTTGCGTTGCTGGATAGCTTCGAACTCGAGCAACTTGACCTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATGaa                                                                                                 <  1:40238/149‑1 (MQ=255)                                                     cggcggACTGGGGCTTGCGTTGCTGGATAGCTTCGAACTCGAGCAAGTTGACCGCGACTTGCGCGCCCGCGGGCGGGATGGGCGGGCGATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑CCCGAGCGAAGAAGGAGAGTGGTGCGGCATGatg                                                                                                >  4:46983/1‑147 (MQ=255)                                                             tGGCCCTTGCGTTGCTGGATAGCTTCGAACTCGAGCAACTTGACCTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGttt                                                                                        >  3:256238/1‑149 (MQ=255)                                                               gCCCTTGCGTTGCTGGATAGCTTCGAACTCGAGCAACTTGACCTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGC‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCt                                                                                      >  5:106672/1‑149 (MQ=255)                                                                           cTGGATAGCTTCGAACTCGAGCAACTTGACCTCGACTTGCGCGACCGCGGGCTGGATGGGCTGTCTATCA‑GGCGCCTCGGTAGCGGCGGGAGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACg                                                                           <  4:119385/148‑1 (MQ=255)                                                                             ataaacacgtgtggcaaacctgacccgttgtagatcagaaacctgccttcatgcctgaccactattcttcttGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCa                                                                                                                         <  7:90249‑M1/29‑1 (MQ=255)                                                                             ataaacacgtgtggcaaacctgacccgttgtagatcagaaacctgccttcatgcctgaccactattcttcttGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCa                                                                                                                         >  8:90249‑M1/73‑101 (MQ=255)                                                                              gATAGCTTCGAACTCGAGCAACTTGACCTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGt                                                                        <  7:221085/148‑1 (MQ=255)                                                                                   cTTCGAACTCGAGCAACTTGACCTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGtt                                                                  >  1:162160/1‑149 (MQ=255)                                                                                    ttCGAACTCGAGCAACTTGACCTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGttt                                                                 >  4:115515/1‑149 (MQ=255)                                                                                    ttCGAACTCGAGCAACTTGACCTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGttt                                                                 >  7:218898/1‑149 (MQ=255)                                                                                       gAACTCGAGCAACTTGACCTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGc                                                               <  3:124137/148‑1 (MQ=255)                                                                                       gAACTCGAGCAACTTGACCTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGc                                                               >  7:37845/1‑148 (MQ=255)                                                                                        aaCTCGAGCAACTTGACCTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCca                                                             <  4:256238/149‑1 (MQ=255)                                                                                                cAACTTGACCTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGtt                                                     >  2:64441/1‑149 (MQ=255)                                                                                                  agttGACTTGGTCTTGCGCGACGGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCTA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGTTCTACAACGGTTCAGGTTTGCCACACGTGTTTa                                                   <  8:37845/147‑1 (MQ=255)                                                                                                  aCTTGACCTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTa                                                   >  7:139252/1‑149 (MQ=255)                                                                                                   cTTGACCTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTAt                                                  >  5:297782/1‑149 (MQ=255)                                                                                                        ccTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGa                                                                                    <  7:37453/110‑1 (MQ=255)                                                                                                        ccTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGa                                                                                    >  8:37453/1‑110 (MQ=255)                                                                                                         cTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACATCGGGTCAGGTGTGCCAGACGTGTTTATCGCTGa                                            >  4:189640/1‑149 (MQ=255)                                                                                                         cTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGa                                            >  2:226175/1‑149 (MQ=255)                                                                                                          tCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGAc                                           >  2:250573/1‑149 (MQ=255)                                                                                                          tCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGGCAGGTTTGCCACACGTGTTTATCGCTGAc                                           >  7:129879/1‑149 (MQ=255)                                                                                                                  cgcgACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGACGAGCCggg                                   <  6:297782/149‑1 (MQ=255)                                                                                                                    cgACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGACGAGCCGGGAt                                 <  8:218898/149‑1 (MQ=255)                                                                                                                    cgACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGACGAGCCGGGAt                                 <  1:64441/149‑1 (MQ=255)                                                                                                                     gACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGACGAGCCGGGATg                                >  4:25230/1‑149 (MQ=255)                                                                                                                     gACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGAAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTATCGATGACGAGACGGGATg                                >  4:339441/1‑149 (MQ=255)                                                                                                                        cgcgGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACAAGTGTTTATCGCTGTCGAGCCGGGATGTAt                             >  5:307033/1‑149 (MQ=255)                                                                                                                            ggCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGAt                                                                                   >  4:153929/1‑91 (MQ=255)                                                                                                                            ggCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGAt                                                                                   <  3:153929/91‑1 (MQ=255)                                                                                                                                 gATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGACGAGCCGGGATGTATCTTCGAGgc                    >  7:88552/1‑149 (MQ=255)                                                                                                                                 gATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGACGAGCCGGGATGTATCTTCGAGgc                    <  1:8694/149‑1 (MQ=255)                                                                                                                                    gggCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGACGAGCCGGGATGTATCTTCGAGGCGCt                 >  2:41674/1‑149 (MQ=255)                                                                                                                                        cactattcttcttGCCTCGGTT‑CGCCCGCCGCTACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGACGAGCCGGGATGTATCTTCGAGGCGCTTTc              <  6:262008‑M1/136‑1 (MQ=255)                                                                                                                                            tATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGACGAGCCGGGATGTATCTTCGAGGCGCTTTCTGCCg         >  1:211505/1‑149 (MQ=255)                                                                                                                                               cA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGGTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGCCGAGCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCAc      >  4:252651/1‑149 (MQ=255)                                                                                                                                                a‑GGCGCCTCTGTAGCGGCGGGAGA‑TCCGTGGCTAGAAGATTAGGGGTGAGGCATGAAGGCAGGTTTCTGTTCTTCATCGGGTGATGGTTGCCTGTGGTGTTTATCGCTGAGGAGCCGGGCTGTATCTTCGAGTCGCTTTCTGGCGCAc      <  2:324367/148‑1 (MQ=255)                                                                                                                                                    cgcCTCGGTAGCGGAGGGCTA‑ACCGAGTCAATAAGAATAGTGGTCAGGCATGAATGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGTCGAGCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGAc  <  6:307033/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     TGAGCCGGGGGCTGGCGGGGTTGTATCTGAGCACGGCGTACAGTGATGTCACCGGCGAACTGGCCCTTGCGTTGCTGGATAGCTTCGAACTCGAGCAACTTGACCTCGACTTGCGCGACCGCGGGCTGGATGGGCGGTCTATCA‑GGCGCCTCGGTAGCGGCGGGCGA‑ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGACGAGCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGAC  >  NC_002947/2520899‑2521193

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.