New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2547980 =	60 (0.970)	5 (0.090)	4/252	NT	8.1%	coding (222/888 nt)	rhtA	threonine/homoserine exporter
	?	NC_002947	2548026 =	57 (0.970)					coding (176/888 nt)	rhtA	threonine/homoserine exporter

GAAATCGATCGCTCGGCGCGAGGAGAAGATCGCCACGGCCAACGGGCCGGTGAATTCCAGGGCGACGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGCTTTTGGCCAGGGAGGCGCCGGACTGAA  >  NC_002947/2547833‑2548128                                                                                                                                                    |                                                                                                                                                      gAAATCGATCGCTCGGCGCGAGGAGAAGATCGCCACGGCCAACGGGCCGGTGAATTCCAGGGCGACGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACAt                                                                                                                                                      >  4:368985/1‑149 (MQ=255)  aaaTCGATCGCTCGGCGCGAGGAGAAGATCGCCACGGCCAACGGGCCGGTGAATTCCAGGGCGACGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACAtt                                                                                                                                                     >  8:310211/1‑149 (MQ=255)  aaaTCGATCGCTCGGCGCGAGGAGAAGATCGCCACGGCCAACGGGCCGGTGAATTCCAGGGCGACGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACAtt                                                                                                                                                     >  5:250634/1‑149 (MQ=255)   attctatcgCTCGGCGCGAGGAGAAGATCGCCACTGGCAACGGTCGGGTGAATTGCAGGGCGACGGCGATACGGATTGGTACCGTTTGGAGGGCCATATAGAAGATGAAGTTGATGCCGCCCAGTGCCATGCCGTAGATTACCACATTg                                                                                                                                                    <  4:33979/144‑1 (MQ=255)    cctcttcccgatcggcctactgcttatcgccatggcatcgattcagtccggcgcctccctggccaaaagcctgttcccgatcgtcggcgcacaaggcactaccaccctgcgcctgagcttcgccagcatcatcatgctgcttatATTgc                                                                                                                                                   >  6:369890‑M1/145‑149 (MQ=255)       gatcgCTCGGCGCGAGGAGAAGATCGCCACGGCCAACGGGCCGGTGAATTCCAGGGCGACGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTgcgc                                                                                                                                                 >  7:233149/1‑148 (MQ=255)       gatcgCTCGGCGCGAGGAGAAGATCGCCACGGCCAACGGGCCGGTGAATTCCAGGGCGACGGCGATACCGATTGCTACCGTTTGCAGGGACATATAGAAGAGGAAGTTCATGACGCCAAGTGCCATGCCGGAGATGACCACATTgcgc                                                                                                                                                 >  1:383416/1‑148 (MQ=255)           gCTCGGCGCGAGGAGAAGATCGCCACGGCCAACGGGCCGGTGAATTCCAGGGCGACGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACg                                                                                                                                             <  2:164255/148‑1 (MQ=255)            cgatcggcctactgcttatcgccatggcatcgattcagtccggcgcctccctggccaaaagcatgttcccgatcgtcggcgcacaaggcactaccaccctgcgcctgatcttcgccagcatcatcatgctgcttatATTGCGCAACgtg                                                                                                                                           <  8:296235‑M1/13‑1 (MQ=255)            cTCGGCGCGAGGAGAAGATCGCCACGGCCAACGGGCCGGTGAATTCCAGGGCGACGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACgtg                                                                                                                                           >  1:78894/1‑149 (MQ=255)            cTCGGCGCGAGGAGAAGATCGCCACGGCCAACGGGCCGGTGAATTCCAGGGCGACGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACgtg                                                                                                                                           <  8:326029/149‑1 (MQ=255)             tCGGCGCGAGGAGAAGATCGCCACGGCCAACGGGCCGGTGAATTCCAGGGCGACGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACgtgt                                                                                                                                          >  2:48162/1‑149 (MQ=255)             tCGGCGCGAGGAGAAGATCGCCACGGCCAACGGGCCGGTGAATTCCAGGGCGACGGCGATACCGATTGGTAACGTTTGGAGGGCCATATAGAAGAGGAAGTTCATGCCGCGCAGTGCGATGCCGTAGATGACGACATTGCGGAACgtgt                                                                                                                                          >  5:179807/1‑149 (MQ=255)               ggCGCGAGGAGAAGATCGCCACGGCCAACGGGCCGGTGAATTCCAGGGCGACGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTg                                                                                                                                        <  6:331244/149‑1 (MQ=255)                gcgcGAGGAGAAGATCGCCACGGCCAACGGGCCGGTGAATTCCAGGGCGACGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTgg                                                                                                                                       <  6:323002/149‑1 (MQ=255)                       gagaAGATCGCCACGTCCAACGTGCAGGTTAATTCCATCGCCACCGCGATACCTATTGCTACCGTTTGCAGGGCCATATAGAAGAGGAAGATCATGCCGCCCAGTCCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAt                                                                                                                                <  6:179807/149‑1 (MQ=255)                         gaagaTCGCCACGGCCAACGGGCCGGTGAATTCCAGGGCGACGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑Gc                                                                                                                             <  2:78894/149‑1 (MQ=255)                            gaTCGCCACGGCCAACGGGCCGGTGAATTCCAGGGCGACGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTa                                                                                                                          <  8:334714/149‑1 (MQ=255)                              tCGCCACGGCCAACGGGCCGGTGAATTCCAGGGCGACGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTAcc                                                                                                                        >  8:174396/1‑149 (MQ=255)                                  cACGGCCAACGGGCCGGTGAATTCCAGGGCGACGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGc                                                                                                                     >  8:96255/1‑148 (MQ=255)                                  cACGGCCAACGGGCCGGTGAATTCCAGGGCGACGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGACGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGc                                                                                                                     >  6:139040/1‑148 (MQ=255)                                   aCGGCCAACGGGCCGGTGAATTCCAGGGCGACGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCa                                                                                                                   <  5:143469/149‑1 (MQ=255)                                      gCCAACGGGCCGGTGAATTCCAGGGCGACGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACgg                                                                                                                <  7:310211/149‑1 (MQ=255)                                        atcgattcagtccggcgcctccctggccaaaagcatgttcccgatcgtcggcgcacaaggcactaccaccctgcgcctgatcttcaccagcatcatcatgctgcttatATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGgc                                                                                                              <  3:319271‑M1/41‑1 (MQ=255)                                         aaCGGGCCGGTGAATTCCAGGGCGACGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGgcg                                                                                                             >  6:242151/1‑149 (MQ=255)                                             ggCCGGTGAATTCCAGGGCGACGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCaa                                                                                                          >  5:165581/1‑148 (MQ=255)                                                  tccggcgcctccctggccaaaagcatgttccggatcgtcggctcacaaggcactaccaccctgcgcctgatcttcaccagcatcatcatgctgcttatATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAag                                                                                                    >  4:319271‑M1/99‑149 (MQ=255)                                                  tccggcgcctccctggccaaaagcatgttcccgatcgtcggcgcacaaggcactaccaccctgcgcctgatcttcgccagcatcatcatgctgcttatATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAag                                                                                                    >  7:296235‑M1/99‑149 (MQ=255)                                                    cggcgcctccctggccaaaagcatgttcccgatcgtcggcgcacaaggcactaccaccctgcgcctgatcttcgccagcatcatcatgctgcttatATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAagca                                                                                                  >  2:320612‑M1/97‑149 (MQ=255)                                                      aTTCCAGGGCGACGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAagcagc                                                                                                <  3:368985/149‑1 (MQ=255)                                                      aTTCCAGGGCGACGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAagcagc                                                                                                <  7:96255/149‑1 (MQ=255)                                                       ttCCAGGGCGACGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAgcagca                                                                                               >  7:99898/1‑149 (MQ=255)                                                        tCCAGGGCGACGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCat                                                                                              >  6:325278/1‑149 (MQ=255)                                                          cAGGGCGACGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCatga                                                                                            >  2:264252/1‑149 (MQ=255)                                                          cAGGGCGACGGCGATACCGATTGGTACCGTTTGCAGGGCAATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGACCTAGATGACCACATTGCGCAACGAGTTGTCGGTCAT‑GCTTACCCGACACGGGCGCAACATAAgcagcaag                                                                                             >  2:130364/1‑146 (MQ=255)                                                            gggCGACGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCatgat                                                                                           >  1:93891/1‑148 (MQ=255)                                                                  cGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTg                                                                                    <  6:250634/149‑1 (MQ=255)                                                                   ggCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCATCATCATgctgctta                                                                                   <  7:174396/149‑3 (MQ=255)                                                                          ccGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGa                                                                             <  8:233149/148‑1 (MQ=255)                                                                            gATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGAt                                                                            >  8:312277/1‑147 (MQ=255)                                                                                ggTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACTCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGgc                                                                       <  1:91760/148‑1 (MQ=255)                                                                                   aCCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCa                                                                          <  8:193723/142‑1 (MQ=255)                                                                                   aCCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCa                                                                          >  7:193723/1‑142 (MQ=255)                                                                                      gTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGggt                                                                >  4:308810/1‑149 (MQ=255)                                                                                       tttGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGggtg                                                               >  8:89517/1‑149 (MQ=255)                                                                                           cAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTa                                                            <  1:28064/148‑1 (MQ=255)                                                                                             gggCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTg                                                         >  6:165918/1‑149 (MQ=255)                                                                                               gCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGcc                                                       <  3:308810/149‑1 (MQ=255)                                                                                                 cATATAGAAGAGGAAGTTCATGCCGCCCAGTTCCATGCCGTTGATTTTTTTATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAACATAAGCAGCATGATGATGCTGGGGAAGATCAGGCGCAGGGTGGTAGTGCCtt                                                     <  1:130364/149‑1 (MQ=255)                                                                                                   tataGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTtgt                                                   >  7:178016/1‑149 (MQ=255)                                                                                                       gaagaGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTgcg                                                <  1:153602/148‑1 (MQ=255)                                                                                                         agagGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCcg                                             <  6:165581/149‑1 (MQ=255)                                                                                                         agagGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCcg                                             <  7:312277/149‑1 (MQ=255)                                                                                                               aGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATc                                       <  5:242151/149‑1 (MQ=255)                                                                                                                gTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTtgtg                                                  <  1:242143/137‑1 (MQ=255)                                                                                                                gTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTtgtg                                                  >  2:242143/1‑137 (MQ=255)                                                                                                                gTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCg                                      >  1:288933/1‑149 (MQ=255)                                                                                                                gTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCg                                      <  2:93891/149‑1 (MQ=255)                                                                                                                   cATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCggg                                    <  7:324092/148‑1 (MQ=255)                                                                                                                   cATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTCGCGAAGATCAGCCGCAGCGTGGAAGTGCCTTGTGCGCCGACGATCggg                                    >  7:210745/1‑148 (MQ=255)                                                                                                                    aTGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGaa                                  <  8:99898/149‑1 (MQ=255)                                                                                                                     tGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCATGGCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGaa                                  >  1:300781/1‑149 (MQ=255)                                                                                                                     tGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGaa                                  >  3:312437/1‑148 (MQ=255)                                                                                                                     tGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGaa                                  >  6:332580/1‑148 (MQ=255)                                                                                                                     tGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAAc                                 <  7:89517/149‑1 (MQ=255)                                                                                                                         gccCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGc                             >  4:272600/1‑149 (MQ=255)                                                                                                                           ccAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGGGCCTTGTGCGCCGACGATCGGGAACATGCtt                           <  5:64901/149‑1 (MQ=255)                                                                                                                           ccAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTAACCGCCACGGGCGCAATATAAGCAGCATGATGAAGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGCtt                           >  2:227284/1‑149 (MQ=255)                                                                                                                               tGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGCTTTTgg                       <  1:48162/149‑1 (MQ=255)                                                                                                                                   aagCCGTACATCACCTCATTGCTCAACGTGTGGGCGGGAAT‑GCTTACCCGCCACGGGCGCTATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGCTTTTGGCCAg                   <  2:383416/147‑1 (MQ=255)                                                                                                                                               aCCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGaa                                  <  6:104175/122‑1 (MQ=255)                                                                                                                                                ccACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGCTTTTGGCCAGGGAGGCGCCGGa       <  2:288933/148‑1 (MQ=255)                                                                                                                                                   caTTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGCTTTTGGCCAGGGAGGCGCCGGACTg    >  2:262035/1‑148 (MQ=255)                                                                                                                                                    ATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGCTTTTGGCCAGGGAGGCGCCGGACTGaa  >  5:139040‑M1/1‑149 (MQ=255)                                                                                                                                                    ATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGCTTTTGGCCAGGGAGGCGCCGGACTGaa  >  5:165918‑M1/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                      GAAATCGATCGCTCGGCGCGAGGAGAAGATCGCCACGGCCAACGGGCCGGTGAATTCCAGGGCGACGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGCTTTTGGCCAGGGAGGCGCCGGACTGAA  >  NC_002947/2547833‑2548128

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.