New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2547980 =	60 (0.970)	5 (0.090)	4/252	NT	8.1%	coding (222/888 nt)	rhtA	threonine/homoserine exporter
	?	NC_002947	2548026 =	57 (0.970)					coding (176/888 nt)	rhtA	threonine/homoserine exporter

GTGAATTCCAGGGCGACGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGCTTTTGGCCAGGGAGGCGCCGGACTGAATCGATGCCATGGCGATAAGCAGTAGGCCGATCGGGAAGAGG  >  NC_002947/2547882‑2548169                                                                                                                                                  |                                                                                                                                                tccggcgcctccctggccaaaagcatgttccggatcgtcggctcacaaggcactaccaccctgcgcctgatcttcaccagcatcatcatgctgcttatATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAag                                                                                                                                             >  4:319271‑M1/99‑149 (MQ=255) tccggcgcctccctggccaaaagcatgttcccgatcgtcggcgcacaaggcactaccaccctgcgcctgatcttcgccagcatcatcatgctgcttatATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAag                                                                                                                                             >  7:296235‑M1/99‑149 (MQ=255)   cggcgcctccctggccaaaagcatgttcccgatcgtcggcgcacaaggcactaccaccctgcgcctgatcttcgccagcatcatcatgctgcttatATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAagca                                                                                                                                           >  2:320612‑M1/97‑149 (MQ=255)     aTTCCAGGGCGACGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAagcagc                                                                                                                                         <  3:368985/149‑1 (MQ=255)     aTTCCAGGGCGACGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAagcagc                                                                                                                                         <  7:96255/149‑1 (MQ=255)      ttCCAGGGCGACGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAgcagca                                                                                                                                        >  7:99898/1‑149 (MQ=255)       tCCAGGGCGACGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCat                                                                                                                                       >  6:325278/1‑149 (MQ=255)         cAGGGCGACGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCatga                                                                                                                                     >  2:264252/1‑149 (MQ=255)         cAGGGCGACGGCGATACCGATTGGTACCGTTTGCAGGGCAATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGACCTAGATGACCACATTGCGCAACGAGTTGTCGGTCAT‑GCTTACCCGACACGGGCGCAACATAAgcagcaag                                                                                                                                      >  2:130364/1‑146 (MQ=255)           gggCGACGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCatgat                                                                                                                                    >  1:93891/1‑148 (MQ=255)                 cGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTg                                                                                                                             <  6:250634/149‑1 (MQ=255)                  ggCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCATCATCATgctgctta                                                                                                                            <  7:174396/149‑3 (MQ=255)                         ccGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGa                                                                                                                      <  8:233149/148‑1 (MQ=255)                           gATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGAt                                                                                                                     >  8:312277/1‑147 (MQ=255)                               ggTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACTCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGgc                                                                                                                <  1:91760/148‑1 (MQ=255)                                  aCCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCa                                                                                                                   <  8:193723/142‑1 (MQ=255)                                  aCCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCa                                                                                                                   >  7:193723/1‑142 (MQ=255)                                     gTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGggt                                                                                                         >  4:308810/1‑149 (MQ=255)                                      tttGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGggtg                                                                                                        >  8:89517/1‑149 (MQ=255)                                          cAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTa                                                                                                     <  1:28064/148‑1 (MQ=255)                                            gggCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTg                                                                                                  >  6:165918/1‑149 (MQ=255)                                              gCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGcc                                                                                                <  3:308810/149‑1 (MQ=255)                                                cATATAGAAGAGGAAGTTCATGCCGCCCAGTTCCATGCCGTTGATTTTTTTATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAACATAAGCAGCATGATGATGCTGGGGAAGATCAGGCGCAGGGTGGTAGTGCCtt                                                                                              <  1:130364/149‑1 (MQ=255)                                                  tataGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTtgt                                                                                            >  7:178016/1‑149 (MQ=255)                                                      gaagaGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTgcg                                                                                         <  1:153602/148‑1 (MQ=255)                                                        agagGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCcg                                                                                      <  7:312277/149‑1 (MQ=255)                                                        agagGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCcg                                                                                      <  6:165581/149‑1 (MQ=255)                                                              aGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATc                                                                                <  5:242151/149‑1 (MQ=255)                                                               gTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTtgtg                                                                                           >  2:242143/1‑137 (MQ=255)                                                               gTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTtgtg                                                                                           <  1:242143/137‑1 (MQ=255)                                                               gTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCg                                                                               <  2:93891/149‑1 (MQ=255)                                                               gTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCg                                                                               >  1:288933/1‑149 (MQ=255)                                                                  cATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCggg                                                                             <  7:324092/148‑1 (MQ=255)                                                                  cATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTCGCGAAGATCAGCCGCAGCGTGGAAGTGCCTTGTGCGCCGACGATCggg                                                                             >  7:210745/1‑148 (MQ=255)                                                                   aTGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGaa                                                                           <  8:99898/149‑1 (MQ=255)                                                                    tGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCATGGCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGaa                                                                           >  1:300781/1‑149 (MQ=255)                                                                    tGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGaa                                                                           >  6:332580/1‑148 (MQ=255)                                                                    tGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGaa                                                                           >  3:312437/1‑148 (MQ=255)                                                                    tGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAAc                                                                          <  7:89517/149‑1 (MQ=255)                                                                        gccCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGc                                                                      >  4:272600/1‑149 (MQ=255)                                                                          ccAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGGGCCTTGTGCGCCGACGATCGGGAACATGCtt                                                                    <  5:64901/149‑1 (MQ=255)                                                                          ccAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTAACCGCCACGGGCGCAATATAAGCAGCATGATGAAGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGCtt                                                                    >  2:227284/1‑149 (MQ=255)                                                                              tGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGCTTTTgg                                                                <  1:48162/149‑1 (MQ=255)                                                                                  aagCCGTACATCACCTCATTGCTCAACGTGTGGGCGGGAAT‑GCTTACCCGCCACGGGCGCTATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGCTTTTGGCCAg                                                            <  2:383416/147‑1 (MQ=255)                                                                                             tgcttatattgcgcccgtggcgggtacgcatgaccgccaacacgttgcgcaatATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGCTTTTGGCCAGGGAGGCGCCg                                                  >  2:320612‑M2/54‑149 (MQ=255)                                                                                              aCCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGaa                                                                           <  6:104175/122‑1 (MQ=255)                                                                                               cttatattgcgcccgtggcgggtacgcatgaccgccaacacgttgcgcaatATAAGCAGCATGATGATGCTGGTGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGAGCCGACGATCCGGAACATGCTTTTGGCCAGGGAGGCGCCGGa                                                >  4:319271‑M2/52‑149 (MQ=255)                                                                                               cttatattgcgcccgtggcgggtacgcatgaccgccaacacgttgcgcaatATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGCTTTTGGCCAGGGAGGCGCCGGa                                                >  7:296235‑M2/52‑149 (MQ=255)                                                                                               ccACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGCTTTTGGCCAGGGAGGCGCCGGa                                                <  2:288933/148‑1 (MQ=255)                                                                                                  caTTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGCTTTTGGCCAGGGAGGCGCCGGACTg                                             >  2:262035/1‑148 (MQ=255)                                                                                                   ATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGCTTTTGGCCAGGGAGGCGCCGGACTGaa                                           >  5:139040‑M1/1‑149 (MQ=255)                                                                                                   ATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGCTTTTGGCCAGGGAGGCGCCGGACTGaa                                           >  5:165918‑M1/1‑149 (MQ=255)                                                                                                      GCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGTGAACATGCTTTTGGCCAGGGAGGCGCCGGACTGAATc                                         >  1:264252‑M1/1‑148 (MQ=255)                                                                                                      GCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGCTTTTGGCCAGGGAGGCGCCGGACTGAATc                                         >  2:300781‑M1/1‑148 (MQ=255)                                                                                                       CGCAAAGTGTTGGCGGTCAT‑TCGTACCCGCCACGGGCGCAATAAATGCACCATGATGATGCTGGCGAAGATCAGGCGCAGGCTGGTAGTGCCGTGTTCGCCGACGATGGGGAACATGCTTTTGGCCAGGGAGGCGCCAGACTGAATCGa                                       >  8:210745‑M1/1‑149 (MQ=255)                                                                                                        GCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGCTTTTGGCCAGGGAGGCGCCGGACTGAATCGAt                                      >  4:312437‑M1/1‑149 (MQ=255)                                                                                                         gcccgtggcgggtacgcatgaccgccaacacgttgcgcaatATAAGCAGCATGATGATGCTGGTGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGCTTTTGGCCAGGGAGGCGCCGGACTGAATCGAt                                      <  3:319271‑M2/108‑1 (MQ=255)                                                                                                                 tGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGCTTTTGGc                                                               >  6:101322/1‑115 (MQ=255)                                                                                                                 tGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGCTTTTGGc                                                               <  5:101322/115‑1 (MQ=255)                                                                                                                     ggTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGCTTTTGGCCAGGGAGGCGCCGGACTGAATCGAt                                      <  1:206372/136‑1 (MQ=255)                                                                                                                     ggTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGCTTTTGGCCAGGGAGGCGCCGGACTGAATCGAt                                      >  2:206372/1‑136 (MQ=255)                                                                                                                         aT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGCTTTTGGCCAGGGAGGCGCCGGACTGAATCGATGCCATGGCGATAAGCAg                     >  1:142015/1‑149 (MQ=255)                                                                                                                         aT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGCTTTTGGCCAGGGAGGCGCCGGACTGAATCGATGCCATGGCGATAAGCAg                     <  3:272600/149‑1 (MQ=255)                                                                                                                             cGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGCTTTTGGCCAGGGAGGCGCCGGACTGAATCGATGCCAt                                 <  3:335336/134‑1 (MQ=255)                                                                                                                             cGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGCTTTTGGCCAGGGAGGCGCCGGACTGAATCGATGCCAt                                 >  4:335336/1‑134 (MQ=255)                                                                                                                               tACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGCTTTTGGCCAGGGAGGCGCCGGACTGAATCGATGCCATGGCGATAAGCAGTAGGc                <  8:178016/149‑1 (MQ=255)                                                                                                                                aCCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTa                                                                                                     <  2:104588/63‑1 (MQ=255)                                                                                                                                aCCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTa                                                                                                     >  1:104588/1‑63 (MQ=255)                                                                                                                                  ccGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATAAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGCTTTTGGCCAGGGAGGCGCCGGACTGAATCGATGCCATGGCGATAAGCAGTAGGCCGa             >  5:391605/1‑149 (MQ=255)                                                                                                                                     ccACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGCTTTTGGCCAGGGAGGCGCCGGACTGAATCGATGCCATGGCGATAAGCAGTAGGCCGATCg          >  7:263584/1‑149 (MQ=255)                                                                                                                                     cacgttgcgcaatATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGCTTTTGGCCAGGGAGGCGCCGGACTGAATCGATGCCATGGCGATAAGCAGTAGGCCGATCg          <  8:296235‑M2/136‑1 (MQ=255)                                                                                                                                             gcaatATAAGCAGCATGATGATGCTGGCGAAGCTCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACAGGCTTTTGGCCAGGGAGGCGCCGGACTGAATCGATGCCATGGCGATAAGCAGTAGGCCGATCGGGAAGAgg  >  6:369890‑M2/6‑149 (MQ=255)                                                                                                                                                  |                                                                                                                                                GTGAATTCCAGGGCGACGGCGATACCGATTGGTACCGTTTGCAGGGCCATATAGAAGAGGAAGTTCATGCCGCCCAGTGCCATGCCGTAGATGACCACATTGCGCAACGTGTTGGCGGTCAT‑GCGTACCCGCCACGGGCGCAATATAAGCAGCATGATGATGCTGGCGAAGATCAGGCGCAGGGTGGTAGTGCCTTGTGCGCCGACGATCGGGAACATGCTTTTGGCCAGGGAGGCGCCGGACTGAATCGATGCCATGGCGATAAGCAGTAGGCCGATCGGGAAGAGG  >  NC_002947/2547882‑2548169

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.