New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2748746 =	53 (0.850)	4 (0.070)	4/260	NT	7.2%	coding (21/276 nt)	PP_2404	hypothetical protein
	?	NC_002947	2748805 =	51 (0.840)					coding (80/276 nt)	PP_2404	hypothetical protein

GATACAGCAGGAGGCACATCACAACGTTGGGCGACACATGCGGGATACCTGGCTGACGTGAAATGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCG  >  NC_002947/2748605‑2748892                                                                                                                                              |                                                                                                                                                   gATACAGCAGGAGGCACATCACAACGTTGGGCGACACATGCGGGATACCTGGCTGACGTGAAATGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATcgccagcgc                                                                                                                                               >  6:352023/1‑147 (MQ=255) gATACAGCAGGAGGCACATCACAACGTTGGGCGACACATGCGGGATACCTGGCTCACGTGAAATGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGATCCTGAAGACTATcgccagctcca                                                                                                                                             >  4:115891/1‑149 (MQ=255)    aCAGCAGGAGGCACATCACAACGTTGGGCGACACATGCGGGATACCTGGCTGACGTGGAATGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGcc                                                                                                                                          >  5:290904/1‑149 (MQ=255)      agcagGAGGCACATCACAACGTTGGGCGACACATGCGGGATACCTGGCTGACGTGAAATGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTg                                                                                                                                        >  1:351156/1‑149 (MQ=255)       gcagGAGGCACATCACAACGTTGGGCGACACATGCGGGATACCTGGCTGACGTGAAATGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGt                                                                                                                                       >  5:259103/1‑149 (MQ=255)            aggCACATCACAACGTTGGGCGACACATGCGGGATACCTGGCTGACGTGAAATGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGcc                                                                                                                                  <  3:243558/149‑1 (MQ=255)                  aTCACAACGTTGGGCGACACATGCGGGATACCTCGCTGACGAGAAATGGTTCTCGACCTGGGAGCAACACTCCTCACACCCAACTGTTACCCAGGAGAGAAGCCATGAACCTCAACACTATCCACAGCCCCAGCCAGTTCGCCGTGCTc                                                                                                                            >  3:285524/1‑149 (MQ=255)                   tCACAACGTTGGGCGACACATGCGGGATACCTGGCTGACGTGAAATGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCg                                                                                                                           >  1:78144/1‑149 (MQ=255)                         ttcgggtattcaccaggccgcaggcattgcgctgatcatcctgcaccgacagcactctcttcacatccagaggttcaccgtagcggtactgcatgaccccgccatcctgcatcggggCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCg                                                                                                                     <  2:345924‑M1/32‑1 (MQ=255)                         cGTTGGGCGACACATGCGGGATACCTGGCTGACGTGAAATGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCg                                                                                                                     <  6:259103/149‑1 (MQ=255)                          gTTGGGCGACACATGCGGGATACCTGGCTGACGTGAAATGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCgg                                                                                                                    >  4:191496/1‑149 (MQ=255)                           ttGGGCGACACATGCGGGATACCTGGCTGACGTGAAATGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGt                                                                                                                   <  2:212044/149‑1 (MQ=255)                           ttGGGCGACACATGCGGGATACCTGGCTGACGTGAAATGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGt                                                                                                                   <  5:187799/149‑1 (MQ=255)                                  acacATGCGGGATACCTGGCTGACGTGAAATGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATcg                                                                                                            >  5:372236/1‑149 (MQ=255)                                  acacATGCGGGATACCTGGCTGACGTGAAATGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCACGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATcg                                                                                                            <  8:240464/149‑1 (MQ=255)                                   cacaTGCGGGATACCTGGCTGACGTGAAATGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATcgc                                                                                                           >  6:241534/1‑149 (MQ=255)                                    acaTGCGGGATACCTGGCTGACGTGAAATGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATcgcc                                                                                                          >  7:28533/1‑149 (MQ=255)                                       tGCGGGATACCTGGCTGACGTGAAATGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCgccgcc                                                                                                       >  4:231799/1‑149 (MQ=255)                                          gggATACCTGGCTGACGTGAAATGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAg                                                                                                    <  8:28533/149‑1 (MQ=255)                                                  attgcgctgatcatcctgcaccgacagcactctcttcacatccagaggttcaccgtagcggtactgcatgaccccgccatcctgcatcggggCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCAc                                                                                            >  1:345924‑M1/93‑149 (MQ=255)                                                           tGAAATGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGAt                                                                                   >  3:202035/1‑149 (MQ=255)                                                               aTGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAg                                                                               >  6:277675/1‑149 (MQ=255)                                                                  tgcaccgacagcactctcttcacatccagaggctcaccgtagcggtactgcatgaccccgccatcctgcatcggggCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACt                                                                                           >  8:261001‑M1/77‑134 (MQ=255)                                                                  tgcaccgacagcactctcttcacatccagaggctcaccgtagcggtactgcatgaccccgccatcctgcatcggggCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACt                                                                                           <  7:261001‑M1/58‑1 (MQ=255)                                                                     ctcGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGc                                                                         >  7:104579/1‑149 (MQ=255)                                                                        gACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCggg                                                                      <  5:343574/149‑1 (MQ=255)                                                                        gACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCggg                                                                      <  3:231799/149‑1 (MQ=255)                                                                        gACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCg                                                                        <  6:290904/147‑1 (MQ=255)                                                                           gggggATCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGCCCGCCACTGCCCCGATGCAGGATGGCGGGGTc                                                                   <  3:29926/148‑1 (MQ=255)                                                                           cGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCgggg                                                                     <  5:188356/147‑1 (MQ=255)                                                                           cGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCgggg                                                                     >  6:188356/1‑147 (MQ=255)                                                                            ggggAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGGCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATTGCGGGGTCa                                                                  <  6:372236/149‑1 (MQ=255)                                                                             gggAGCAACACTCCTCACA‑CCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATg                                                                >  8:21397/1‑149 (MQ=255)                                                                              ggAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATg                                                                <  5:277675/149‑1 (MQ=255)                                                                              ggAGCAACACTCCGCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATg                                                                <  8:102980/149‑1 (MQ=255)                                                                                aGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCa                                                              <  4:34174/149‑1 (MQ=255)                                                                                             acacCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGt                                                 >  6:344381/1‑149 (MQ=255)                                                                                             acacCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCACCGCCAGCCTGTTAGCCGTGCTCGGCTTCGGAGCCATCGCCGCCCAGGCCGCCACTGCCCCGAAGCAGGATGGCGGGCTCATGCAGTACCGCTACGGt                                                 >  5:125012/1‑149 (MQ=255)                                                                                               acCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTCCCGCTACGGTGa                                               <  2:78144/149‑1 (MQ=255)                                                                                               acCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGAAGGATGGCGGGGTCATGCAGTACCGCGACggggc                                               >  8:341495/1‑146 (MQ=255)                                                                                                 ccttgtgtTACCCAGGATTGAAGCCATGAACCTCAAGTCTATCGCCAGCGCCTTCCTGTTCGCCGTGCTGGGCTTCGGTGCCATCGCCGCCCAGGCGGGCACTGCCGCGATGCAGGATGGCGGGGTTTTGCTGTAGCGCTAGGGTGTGc                                             <  4:285524/145‑1 (MQ=255)                                                                                                        ttACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTgg                                       <  7:21397/148‑1 (MQ=255)                                                                                                        ttACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTgg                                       <  5:352023/148‑1 (MQ=255)                                                                                                          aCCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGAt                                     <  5:241534/148‑1 (MQ=255)                                                                                                             cAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGAtgtg                                  >  6:133252/1‑148 (MQ=255)                                                                                                              aGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGAtgtg                                  >  6:66280/1‑147 (MQ=255)                                                                                                                gagagaAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATTGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAaga                              <  4:202035/149‑1 (MQ=255)                                                                                                                gagagaAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAaga                              <  3:191496/149‑1 (MQ=255)                                                                                                                   agaAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAagagag                           >  6:388982/1‑149 (MQ=255)                                                                                                                     aaGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTAGCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTg                         <  5:388982/149‑1 (MQ=255)                                                                                                                       gCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCt                       >  2:243518/1‑149 (MQ=255)                                                                                                                        ccATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTg                      >  7:229743/1‑149 (MQ=255)                                                                                                                          aTGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGc                        >  7:158504/1‑145 (MQ=255)                                                                                                                          aTGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGc                        <  8:158504/145‑1 (MQ=255)                                                                                                                               ccTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTg                >  5:259363/1‑148 (MQ=255)                                                                                                                                     gACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGgatg         <  5:344381/149‑1 (MQ=255)                                                                                                                                     gACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGgatg         <  8:104579/149‑1 (MQ=255)                                                                                                                                            gccagcgccagcCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAgcg  <  7:156280/149‑1 (MQ=255)                                                                                                                                             ccagcgccagcCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAgcg  >  8:64972/1‑148 (MQ=255)                                                                                                                                              |                                                                                                                                                   GATACAGCAGGAGGCACATCACAACGTTGGGCGACACATGCGGGATACCTGGCTGACGTGAAATGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCG  >  NC_002947/2748605‑2748892

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.