New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2748746 =	53 (0.850)	4 (0.070)	4/260	NT	7.2%	coding (21/276 nt)	PP_2404	hypothetical protein
	?	NC_002947	2748805 =	51 (0.840)					coding (80/276 nt)	PP_2404	hypothetical protein

TGAAATGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCGGCA  >  NC_002947/2748663‑2748952                                                                                                                                               |                                                                                                                                                    tGAAATGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGAt                                                                                                                                               >  3:202035/1‑149 (MQ=255)     aTGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAg                                                                                                                                           >  6:277675/1‑149 (MQ=255)           ctcGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGc                                                                                                                                     >  7:104579/1‑149 (MQ=255)              gACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCggg                                                                                                                                  <  5:343574/149‑1 (MQ=255)              gACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCggg                                                                                                                                  <  3:231799/149‑1 (MQ=255)              gACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCg                                                                                                                                    <  6:290904/147‑1 (MQ=255)                 gggggATCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGCCCGCCACTGCCCCGATGCAGGATGGCGGGGTc                                                                                                                               <  3:29926/148‑1 (MQ=255)                 cGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCgggg                                                                                                                                 <  5:188356/147‑1 (MQ=255)                 cGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCgggg                                                                                                                                 >  6:188356/1‑147 (MQ=255)                  ggggAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGGCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATTGCGGGGTCa                                                                                                                              <  6:372236/149‑1 (MQ=255)                   gggAGCAACACTCCTCACA‑CCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATg                                                                                                                            >  8:21397/1‑149 (MQ=255)                    ggAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATg                                                                                                                            <  5:277675/149‑1 (MQ=255)                    ggAGCAACACTCCGCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATg                                                                                                                            <  8:102980/149‑1 (MQ=255)                      aGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCa                                                                                                                          <  4:34174/149‑1 (MQ=255)                                   acacCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGt                                                                                                             >  6:344381/1‑149 (MQ=255)                                   acacCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCACCGCCAGCCTGTTAGCCGTGCTCGGCTTCGGAGCCATCGCCGCCCAGGCCGCCACTGCCCCGAAGCAGGATGGCGGGCTCATGCAGTACCGCTACGGt                                                                                                             >  5:125012/1‑149 (MQ=255)                                     acCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTCCCGCTACGGTGa                                                                                                           <  2:78144/149‑1 (MQ=255)                                     acCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGAAGGATGGCGGGGTCATGCAGTACCGCGACggggc                                                                                                           >  8:341495/1‑146 (MQ=255)                                       ccttgtgtTACCCAGGATTGAAGCCATGAACCTCAAGTCTATCGCCAGCGCCTTCCTGTTCGCCGTGCTGGGCTTCGGTGCCATCGCCGCCCAGGCGGGCACTGCCGCGATGCAGGATGGCGGGGTTTTGCTGTAGCGCTAGGGTGTGc                                                                                                         <  4:285524/145‑1 (MQ=255)                                              ttACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTgg                                                                                                   <  7:21397/148‑1 (MQ=255)                                              ttACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTgg                                                                                                   <  5:352023/148‑1 (MQ=255)                                                aCCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGAt                                                                                                 <  5:241534/148‑1 (MQ=255)                                                   cAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGAtgtg                                                                                              >  6:133252/1‑148 (MQ=255)                                                    aGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGAtgtg                                                                                              >  6:66280/1‑147 (MQ=255)                                                      gagagaAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATTGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAaga                                                                                          <  4:202035/149‑1 (MQ=255)                                                      gagagaAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAaga                                                                                          <  3:191496/149‑1 (MQ=255)                                                         agaAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAagagag                                                                                       >  6:388982/1‑149 (MQ=255)                                                           aaGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTAGCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTg                                                                                     <  5:388982/149‑1 (MQ=255)                                                             gCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCt                                                                                   >  2:243518/1‑149 (MQ=255)                                                              ccATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTg                                                                                  >  7:229743/1‑149 (MQ=255)                                                                aTGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGc                                                                                    >  7:158504/1‑145 (MQ=255)                                                                aTGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGc                                                                                    <  8:158504/145‑1 (MQ=255)                                                                     ccTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTg                                                                            >  5:259363/1‑148 (MQ=255)                                                                           gACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGgatg                                                                     <  5:344381/149‑1 (MQ=255)                                                                           gACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGgatg                                                                     <  8:104579/149‑1 (MQ=255)                                                                                  gccagcgccagcCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAgcg                                                              <  7:156280/149‑1 (MQ=255)                                                                                   ccagcgccagcCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAgcg                                                              >  8:64972/1‑148 (MQ=255)                                                                                     agtggcggcctgggcggcgatggcaccgaagccgagcacggcgaacaggctggcgctgCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCa                                                                          >  8:261001‑M2/59‑134 (MQ=255)                                                                                     agtggcggcctgggcggcgatggcaccgaagccgagcacggcgaacaggctggcgctgCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCa                                                                          <  7:261001‑M2/76‑1 (MQ=255)                                                                                      gtggcggcctgggcggcgatggcaccgaagccgagcacggcgaacaggctggcgctgCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAACCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAAt                                                          >  1:345924‑M2/58‑149 (MQ=255)                                                                                          cagcCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCt                                                      <  6:259363/149‑1 (MQ=255)                                                                                          cagcCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCt                                                      <  2:351156/149‑1 (MQ=255)                                                                                          cagcCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGACGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCt                                                      >  5:161845/1‑149 (MQ=255)                                                                                           agcCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTg                                                     >  5:32836/1‑149 (MQ=255)                                                                                            gcCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCACGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGc                                                    >  7:57619/1‑149 (MQ=255)                                                                                                     ccGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGt                                            >  6:217020/1‑148 (MQ=255)                                                                                                        tGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAAt                                        <  7:64972/149‑1 (MQ=255)                                                                                                             ggCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATAcc                                     <  5:66280/147‑1 (MQ=255)                                                                                                               cgaagccgagcacggcgaacaggctggcgctgCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAACCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGaa                                 <  2:345924‑M2/117‑1 (MQ=255)                                                                                                                  cGGTGCCATCGCCTCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGTTCATGCATTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCTGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAAt                                <  6:125012/147‑1 (MQ=255)                                                                                                                  cGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATg                               >  1:207671/1‑148 (MQ=255)                                                                                                                     tGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGAc                            >  7:171900/1‑148 (MQ=255)                                                                                                                     tGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGAc                            >  6:218756/1‑148 (MQ=255)                                                                                                                          tCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGACTACCtt                      >  8:18781/1‑149 (MQ=255)                                                                                                                                   aGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCAt             <  5:217020/149‑1 (MQ=255)                                                                                                                                          cACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGc      <  5:218756/149‑1 (MQ=255)                                                                                                                                               ccccGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCGGc   <  2:207671/147‑1 (MQ=255)                                                                                                                                               ccccGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCGGCa  >  6:43126/1‑148 (MQ=255)                                                                                                                                               |                                                                                                                                                    TGAAATGGTTCTCGACCGGGGAGCAACACTCCTCACACCCAAGTGTTACCCAGGAGAGAAGCCATGAACCTCAAGACTATCGCCAGCGCCAGCCTGTTCGCCGTGCTCGGCTTCGGTGCCATCGCCGCCCAGGCCGCCACTGCCCCGATGCAGGATGGCGGGGTCATGCAGTACCGCTACGGTGAGCCTCTGGATGTGAAGAGAGTGCTGTCGGTGCAGGATGATCAGCGCAATGCCTGCGGCCTGGTGAATACCCGAATGGACTACCTTGACTCCCATGGCCAGCGGCA  >  NC_002947/2748663‑2748952

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.