New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3536478 =	68 (1.100)	5 (0.090)	5/250	NT	6.8%	coding (116/543 nt)	PP_3125	Cro/CI family transcriptional regulator
	?	NC_002947	3536516 =	73 (1.250)					coding (154/543 nt)	PP_3125	Cro/CI family transcriptional regulator

CATGGCTGCCTCAGCCTGGGAAACTCGCGTCACATGTCTATCCGATTGAAACTGCTGCGTAAGAAACTGGGGATGACCCTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAGGCCGGGCAGAGCCGCTACAGCCTGGTGCGCCGTACCGAGCGCCAGGCCCTGGTTGGCGATGGGCAAGGG  >  NC_002947/3536330‑3536623                                                                                                                                                     |                                                                                                                                                   tgcgctggccaatctgactggtgagggccgcgtaccccggcccttgcccatcgccaaccagggcctggcgctcggtacggcgcaccaggctgtagcggctctgcccggcctgctcttcggcgaagagctcttcgacattgacgttcagc                                                                                                                                                    <  3:347190‑M1/1‑1 (MQ=255) tgcgctggccaatctgactggtgagggccgcgtaccccggcccttgcccatcgccaaccagggcctggcgctcggtacggcgcaccaggctgtagcggctctgcccggcctgctcttcggcgaagagctcttcgacattgacgttcagc                                                                                                                                                    <  5:328952‑M1/1‑1 (MQ=255)   cgctggccaatctgactggtgagggccgcgtaccccggcccttgcccatcgccaaccagggcctggcgctcggtacggcgcaccaggctgtagcggctctgcccggcctgctcttcggcgaagagctcttcgacattgacgttcagc                                                                                                                                                    >  4:148455‑M1/147‑147 (MQ=255)    ggCTGCCTCAGCCTGGGAAACTCGCGTCACATGTCTATCCGATTGAAACTGCTGCGTAAGAAACTGGGGATGACCCTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGcc                                                                                                                                                 >  2:172380/1‑149 (MQ=255)      cTGCCTCAGCCTGGGAAACTCGCGTCACATGTCTATCCGATTGAAACTGCTGCGTAAGAAACTGGGGATGACCCTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCt                                                                                                                                               >  4:3097/1‑149 (MQ=255)        gccaatctgactggtgagggccgcgtaccccggcccttgcccatcgccaaccagggcctggcgctcggtacggcgcaccaggctgtagcggctctgcccggcctgctcttcggcgaagagctcttcgacattgacgttcagCGCCCTc                                                                                                                                              >  4:347190‑M1/142‑148 (MQ=255)                   ggAAACTCGCGTCACATGTCTATCCGATTGAAACTGCTGCGTAAGAAACTGGGGATGACCCTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTgcggc                                                                                                                                  >  3:63522/1‑149 (MQ=255)                     aaaCTCGCGTCACATGTCTATCCGATTGAAACTGCTGCGTAAGAAACTGGGGATGACCCTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGgcgc                                                                                                                                >  7:39549/1‑149 (MQ=255)                                acaTGTCTATCCGATTGAAACTGCTGCGTAAGAAACTGGGGATGACCCTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGc                                                                                                                      <  4:183356/148‑1 (MQ=255)                                 caTGTCTATCCGATTGAAACTGCTGCGTAAGAAACTGGGGATGACCCTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGa                                                                                                                    <  1:172380/149‑1 (MQ=255)                                    gTCTATCCGATTGAAACTGCTGCGTAAGAAACTGGGGATGACCCTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAggg                                                                                                                 >  4:185697/1‑149 (MQ=255)                                     tCTATCCGATTGAAACTGCTGCGTAAGAAACTGGGGATGACCCTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGgc                                                                                                                >  7:270237/1‑149 (MQ=255)                                      cggcccttgcccatcgccaaccagggcctggcgctcggtacggcgcaccaggctgtagcggctctgcccggcctgctcttcggcgaagagctcttcgacattgacgttcagCGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGgcg                                                                                                               >  8:364820‑M1/112‑149 (MQ=255)                                         tCCGATTGAAACTGCTGCGTAAGAAACTGGGGATGACCCTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGGGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCt                                                                                                             >  1:320871/1‑148 (MQ=255)                                         tCCGATTGAAACTGCTGCGTAAGAAACTGGGGATGACCCTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCt                                                                                                             >  2:234286/1‑148 (MQ=255)                                           cGATTGAAACTGCTGCGTAAGAAACTGGGGATGACCCTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGaa                                                                                                          >  8:127636/1‑149 (MQ=255)                                               tgtaaCTGCTCCCTAAGAAACTGGGGATGACCCTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGCTCGAGCGCGGGCTCAACACGCCCTCGATCGCTGCGGCTCTGAAACTGGCGAGGGCGCTGAACGTc                                                                                                      <  3:314596/146‑1 (MQ=255)                                               tGAAACTGCTGCGTAAGAAACTGGGGATGACCCTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGt                                                                                                       >  2:202566/1‑148 (MQ=255)                                                ccatcgccaaccagggcctggcgctcggtacggcgcaccaggctgtagcggctctgcccggcctgctcttcggcgaagagctcttcgacattgacgttcagc                                                                                                                                                    <  5:82251‑M1/1‑1 (MQ=255)                                                ccatcgccaaccagggcctggcgctcggtacggcgcaccaggctgtagcggctctgcccggcctgctcttcggcgaagagctcttcgacattgacgttcagc                                                                                                                                                    >  6:82251‑M1/102‑102 (MQ=255)                                                ccatcgccaaccagggcctggcgctcggtacggcgcaccaggctgtagcggctctgcccggcctgctcttcggcgaagagctcttcgacattgacgttcagCGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGgcgc                                                                                                              <  3:321970‑M1/39‑1 (MQ=255)                                                ccatcgccaaccagggcctggcgctcggtacggcgcaccaggctgtagcggctctgcccggcctgctcttcggcgaagagctcttcgacattgacgttcagCGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGgcgc                                                                                                              >  4:321970‑M1/102‑140 (MQ=255)                                                 catcgccaaccagggcctggcgctcggtacggcgcaccaggctgtagcggctctgcccggcctgctcttcggcgaagagctcttcgacattgacgttcagCGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAgg                                                                                                                  <  8:343278‑M1/35‑1 (MQ=255)                                                 catcgccaaccagggcctggcgctcggtacggcgcaccaggctgtagcggctctgcccggcctgctcttcggcgaagagctcttcgacattgacgttcagCGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAgg                                                                                                                  >  7:343278‑M1/101‑135 (MQ=255)                                                 aaaCTGCTGCGTAAGAAACTGGGGATGACCCTGGAAATGCTGGCCGAAAAGCCTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGAACGCTGCGGCGCTGCAACTGGCGAGGGCGCTGAACGGCa                                                                                                     >  4:273498/1‑148 (MQ=255)                                                 aaaCTGCTGCGTAAGAAACTGGGGATGACCCTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCaa                                                                                                    <  8:36152/149‑1 (MQ=255)                                                 aaaCTGCTGCGTAAGAAACTGGGGATGACCCTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCa                                                                                                     <  7:22687/148‑1 (MQ=255)                                                  aaCTGCTGCGTAAGAAACTGGGGATGACCCTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAAt                                                                                                   <  5:116565/149‑1 (MQ=255)                                                  aaCTGCTGCGTAAGAAACTGGGGATGACCCTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAAt                                                                                                   <  8:39549/149‑1 (MQ=255)                                                  aaCTGCTGCATAAGAAACTGGGGATGACCCTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCATGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAAt                                                                                                   >  1:3967/1‑149 (MQ=255)                                                          cGTAAGAAACTGGGGATGACCCTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGaa                                                                                             <  7:127636/147‑1 (MQ=255)                                                          cGTAAGAAACTGGGGATGACCCTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAag                                                                                            <  6:194675/148‑1 (MQ=255)                                                           gTAAGAAACTGGGGATGACCCTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGcc                                                                                                                                                 >  1:363159/1‑94 (MQ=255)                                                           gTAAGAAACTGGGGATGACCCTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGcc                                                                                                                                                 <  2:363159/94‑1 (MQ=255)                                                              aGAAACTGGGGATGACCCTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGctc                                                                                       >  2:87631/1‑149 (MQ=255)                                                                 aaCTGGGGATGACCCTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTc                                                                                    <  1:87631/149‑1 (MQ=255)                                                                 aaCTGGGGATGACCCTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTc                                                                                    >  2:183003/1‑149 (MQ=255)                                                                   cTGGGGATGACCCTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGc                                                                                  >  8:261997/1‑149 (MQ=255)                                                                      gggATGACCCTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑Cg                                                                               >  6:192598/1‑148 (MQ=255)                                                                       ggATGACCCTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑Cg                                                                               >  8:201111/1‑147 (MQ=255)                                                                            aCCCTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGc                                                                         <  2:120326/148‑1 (MQ=255)                                                                              ccTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAgg                                                                      >  5:170122/1‑149 (MQ=255)                                                                              ccTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAgg                                                                      >  5:188778/1‑149 (MQ=255)                                                                              ccTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAgg                                                                      >  5:194337/1‑149 (MQ=255)                                                                              ccTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAgc                                                                      >  7:148754/1‑148 (MQ=255)                                                                              ccTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGAGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAgg                                                                      >  5:369059/1‑149 (MQ=255)                                                                                   aaaTGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAGGc                                                                     <  1:103056/145‑1 (MQ=255)                                                                                   aaaTGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAGGc                                                                     >  2:103056/1‑145 (MQ=255)                                                                                   aaaTGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAGGCCggg                                                                 <  7:298027/149‑1 (MQ=255)                                                                                   aaaTGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAGGCCggg                                                                 <  4:310859/149‑1 (MQ=255)                                                                                         tGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAGGCCGGGCAGAGc                                                           >  5:133026/1‑149 (MQ=255)                                                                                          ggCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAGGCCGGGCAGAGcc                                                          <  7:251348/149‑1 (MQ=255)                                                                                            ccGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAGGCCGGGCAGAGCCGc                                                        >  3:39808/1‑149 (MQ=255)                                                                                                        gCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAGGCCGGGCAGAGCCGCTACAGCCTgg                                              <  3:3097/147‑1 (MQ=255)                                                                                                        gCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAGGCCGGGCAGAGCCGCTACAGCCTGGTg                                            <  7:261997/149‑1 (MQ=255)                                                                                                        gCATGACCAAAAGCTACCTGTCAAAGGTCGAGCGCGGCCTCAAAACGCCCTCGATCGCTGCGGGGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCTC‑CGAAGAGCAGGCCGGGCAGAGCCGCTACAGCCTGGTg                                            >  5:195574/1‑149 (MQ=255)                                                                                                          aTGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAGGCCGGGCAGAGCCGCTACAGCCTGGTgcg                                          <  4:63522/149‑1 (MQ=255)                                                                                                          aTGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAGGCCGGGCAGAGCCGCTACAGCCTGGTgcg                                          >  4:27930/1‑149 (MQ=255)                                                                                                            gACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAGGCCGGGCAGAGCCGCTa                                                      >  5:283036/1‑135 (MQ=255)                                                                                                            gACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAGGCCGGGCAGAGCCGCTa                                                      <  6:283036/135‑1 (MQ=255)                                                                                                             aCCAAAAGCTACCTGTCCATGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAGGCCGGGCAGAGCCGCTACAGCCTGGTGCGcc                                        <  2:3967/148‑1 (MQ=255)                                                                                                              ccAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGaa                                                                                             >  1:325808/1‑95 (MQ=255)                                                                                                              ccAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGaa                                                                                             <  2:325808/95‑1 (MQ=255)                                                                                                               cAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAGGCCGGGCAGAGCCGCTACAGCCTGGTGCGCCGTa                                     >  6:34550/1‑149 (MQ=255)                                                                                                                 aaaGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAGGCCGGGCAGAGCCGCTACAGCCTGGTGCGCCGTAcc                                   <  5:192598/149‑1 (MQ=255)                                                                                                                        ccTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGTCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGCAGAGCAGGCCGGGCAGAGCCGCTACAGCCTGGTGCGCCGTACCGAGCGcc                            >  7:145418/1‑149 (MQ=255)                                                                                                                           gTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAGGCCGGGCAGAGCCGCTACAGCCTGGTGCGCCGTACCGAGCGCCAgg                         >  1:249430/1‑149 (MQ=255)                                                                                                                           gTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAGGCCGGGCAGAGCCGCTACAGCCTGGTGCGCCGTACCGAGCGCCAgg                         >  5:255175/1‑149 (MQ=255)                                                                                                                           gTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCAAATTTTACTTCGCTATAAGAGCAGGCCGGGCAGAGCCGCTACAGCCTGGTGCGCCGTACCGAGCGCCAg                          >  1:125912/1‑149 (MQ=255)                                                                                                                              cAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAGGCCGGGCAGAGCCGCTACAGCCTGGTGCGCCGTACCGAGCGCCAGGccc                      <  1:234286/149‑1 (MQ=255)                                                                                                                              cAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAGGCCGGGCAGAGCCGCTACAGCCTGGTGCGCCGTACCGAGCGCCAGGccc                      >  1:110136/1‑149 (MQ=255)                                                                                                                              cAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAGGCCGGGCAGAGCCGCTACAGCCTGGAGCGCCGTACCGAGCGCCAGGccc                      >  1:171250/1‑149 (MQ=255)                                                                                                                              cAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGA‑GGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAGGCCGGGCAGAGCCGCTACAGCCTGGTGCGCCGTACCGAGCGCCAGGCCCt                     >  6:328952/1‑149 (MQ=255)                                                                                                                                 ggTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAGGCCGGGCAGAGCCGCTACAGCCTGGTGCGCCGTACCGAGCGCCAGGCCCTgg                   >  1:66215/1‑149 (MQ=255)                                                                                                                                  gTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAGGCCGGGCAGAGCCGCTACAGCCTGGTGCGCCGTACCGAGCGCCAGGcccaccc                  >  4:5687/1‑145 (MQ=255)                                                                                                                                     gAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAGGCCGGGCAGAGCCGCTACAGCCTGGTGCGCCGTACCGAGCGCCAGGCCCTGGTTgg               >  2:236033/1‑149 (MQ=255)                                                                                                                                           ggCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAGGCCGGGCAGAGCCGCTACAGCCTGGTGCGCCGTACCGAGCGCCAGGCCCTGGTTGGCGATgg         <  2:66215/149‑1 (MQ=255)                                                                                                                                           ggCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAGGCCGGGCAGAGCCGCTACAGCCTGGTGCGCCGTACCGAGCGCCAGGCCCTGGTTGGCGATgg         <  3:27930/149‑1 (MQ=255)                                                                                                                                           ggCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAGGCCGGGCAGAGCCGCTACAGCCTGGTGCGCCGTACCGAGCGCCAGGCCCTGGTTGGCGATgg         <  1:202566/149‑1 (MQ=255)                                                                                                                                           ggCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAGGCCGGGCAGAGCCGCTACAGCCTGGTGCGCCGTACCGAGCGCCAGGCCCTGGTTGGCGATgg         <  5:34550/149‑1 (MQ=255)                                                                                                                                             ccTCAACACGCCCGCGATCGCTGCGGCGCTGACACGGGCGAGGGCGCTGAACGGCAAGGGCGACGAGCGCTTCGC‑CGAAGAGCAGGCCGGGCAGAGCCGCTACAGCCTGGTGCGCCGTACCGAGCGCCAGGCCCTGGGTGGCGATGGGc       <  3:273498/149‑1 (MQ=255)                                                                                                                                              cTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAGGCCGGGCAGAGCCGCTACAGCCTGGTGCGCCGTACCGAGCGCCAGGCCCTGGTTGGCGATGGGc       >  1:61405/1‑148 (MQ=255)                                                                                                                                                 aaCACGCGCTCGATCGGTGCGGCGCTGATACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAGGCCGGGCAGAGCCGCTACAGCCTGGTGCGCAGTACCGAGCGCCAGGCCCTGGTTGGCGATGGGCAAg    <  6:195574/148‑1 (MQ=255)                                                                                                                                                 aaCACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAGGCCGGGCAGAGCCGCTACAGCCTGGTGCGCCGTACCGAGCGCCAGGCCCTGGTTGGCGATGGGCaa     <  1:183003/147‑1 (MQ=255)                                                                                                                                                  acacGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAGGCCGGGCAGAGCCGCTACAGCCTGGTGCGCCGTACCGAGCGCCAGGCCCTGGTTGGCGATGGGCAAggg  >  6:81843/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                   CATGGCTGCCTCAGCCTGGGAAACTCGCGTCACATGTCTATCCGATTGAAACTGCTGCGTAAGAAACTGGGGATGACCCTGGAAATGCTGGCCGAAAAGACTGGCATGACCAAAAGCTACCTGTCCAAGGTCGAGCGCGGCCTCAACACGCCCTCGATCGCTGCGGCGCTGAAACTGGCGAGGGCGCTGAACGTCAATGTCGAAGAGCTCTTCGC‑CGAAGAGCAGGCCGGGCAGAGCCGCTACAGCCTGGTGCGCCGTACCGAGCGCCAGGCCCTGGTTGGCGATGGGCAAGGG  >  NC_002947/3536330‑3536623

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.