New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4933751 =	61 (0.980)	4 (0.070)	4/252	NT	6.9%	coding (698/1308 nt)	flhF	flagellar biosynthesis protein FlhF
	?	NC_002947	4933806 =	51 (0.870)					coding (643/1308 nt)	flhF	flagellar biosynthesis protein FlhF

GCCCGGGTCGACGTAAGTCACCGGCACGTTGAGGATGCGGCCCAGGGTCTTGAGCTGTTCCTGAGCGCCGATACGGAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGCTCTTCGATCTCGGCGG  >  NC_002947/4933603‑4933898                                                                                                                                                     |                                                                                                                                                    cgcctgcagcgcatcggcctgtccgggccgatcgcccgcgagctgctggacctgaccgccgagatcgaagagccgcgccaggcctggcgcatgctgctggctcacttggcacggatgatcgaagtgcctgaaatcgagccgatcgaaga                                                                                                                                                     >  1:227304‑M1/149‑149 (MQ=255) cgcctgcagcgcatcggcctgtccgggccgatcgcccgcgagctgctggacctgaccgccgagatcgaagagccgcgccaggcctggcgcatgctgctggctcacttggcacggatgatcgaagtgcctgaaatcgagccgatcgaaga                                                                                                                                                     >  1:233024‑M1/149‑149 (MQ=255)   ccGGGTCGACGTAAGTCACCGGCACGTTGAGGATGCGGCCCAGGGTCTTGAGCTGTTCCTGAGCGCCGATACGGAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAgg                                                                                                                                                   >  3:338056/1‑149 (MQ=255)    cGGGTCGACGTAAGTCACCGGCACGTTGAGGATGCGGCCCAGGGTCTTGAGCTGTTCCTGAGCGCCGATACGGAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAggg                                                                                                                                                  <  2:39495/149‑1 (MQ=255)       cagcgcatcggcctgtcggggccgatcgcccgcgagctgctggacctgaccgccgagatcgaagagccgcgccaggcctggcgcatgctgctggctcacttggcacggatgatcgaagtgcctgaaatcgagccgatcgaagAGggtg                                                                                                                                                >  6:247491‑M1/143‑148 (MQ=255)       cagcgcatcggcctgtccgggccgatcgcccgcgagctgctggacctgaccgccgagatcgaagagccgcgccaggcctggcgcatgctgctggctcacttggcacggatgatcgaagtgcctgaaatcgagccgatcgaagAGggtgg                                                                                                                                               >  5:189693‑M1/143‑149 (MQ=255)       cagcgcatcggcctgtccgggccgatcgcccgcgagctgctggacctgaccgccgagatcgaagagccgcgccaggcctggcgcatgctgctggctcacttggcacggatgatcgaagtgcctgaaatcgagccgatcgaagAGggtg                                                                                                                                                >  1:43763‑M1/143‑148 (MQ=255)        tCGACGTAAGTCACCGGCACGTTGAGGATGCGGCCCAGGGTCTTGAGCTGTTCCTGAGCGCCGATACGGAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGggtggt                                                                                                                                              <  4:182225/149‑1 (MQ=255)           aCGTAAGTCACCGGCACGTTGAGGATGCGGCCCAGGGTCTTGAGCTGTTCCTGAGCGCCGATACGGAAGCTGTCCATGCTTACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGggtggtggt                                                                                                                                           >  6:109290/1‑149 (MQ=255)           aCGTAAGTCACCGGCACGTTGAGGATGCGGCCCAGGGTCTTGAGCTGTTCCTGAGCGCCGATACGGAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGggtggtggt                                                                                                                                           <  1:358737/149‑1 (MQ=255)           aCGTAAGTCACCGGCACGTTGAGGATGCGGCCCAGGGTCTTGAGCTGTTCCTGAGCGCCGATACGGAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGggtggtggt                                                                                                                                           >  3:115253/1‑149 (MQ=255)             gTAAGTCACCGGCACGTTGAGGATGCGGCCCAGGGTCTTGAGCTGTTCCTGAGCGCCGATACGGAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCAAGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCt                                                                                                                                         >  7:83346/1‑149 (MQ=255)              tAAGTCACCGGCACGTTGAGGATGCGGCCCAGGGTCTTGAGCTGTTCCTGAGTGCCGATACGGAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCtt                                                                                                                                        <  3:147772/149‑1 (MQ=255)                  tCACCGGCACGTTGAGGATGCGGCCCAGGGTCTTGAGCTGTTCCTGAGCGCCGATACGGAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGggtggtg                                                                                                                                             <  8:215718/140‑1 (MQ=255)                  tCACCGGCACGTTGAGGATGCGGCCCAGGGTCTTGAGCTGTTCCTGAGCGCCGATACGGAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCACggtggtg                                                                                                                                             >  7:215718/1‑140 (MQ=255)                      cGGCACGTTGAGGATGCGGCCCAGGGTCTTGAGCTGTTCCTGAGCGCCGATACGGAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGc                                                                                                                                >  3:320450/1‑149 (MQ=255)                        gCACGTTGAGGATGCGGCCCAGGGTCTTGAGCTGTTCCTGAGCGCCGATACGGAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGccc                                                                                                                              >  1:292050/1‑149 (MQ=255)                           cGTTGAGGATGCGGCCCAGGGTCTTGAGCTGTTCCTGAGCGCCGATACGGAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCccgcc                                                                                                                           >  3:219939/1‑149 (MQ=255)                            gTTGAGGATGCGGCCCAGGGTCTTGAGCTGTTGCTGAGCGCCGAGACGGAAGCTGTCCCTGCTCACGAGCGGCAGGTTCTGCGCGGCGTACTTGAGCACGTAGCGCGCGGCCCGCGTGGCCAGGGTGGTGGGCTTGCCCATGCccgccg                                                                                                                          >  4:97865/1‑149 (MQ=255)                             ttGAGGATGCGGCCCAGGGTCTTGAGCTGTTCCTGAGCGCCGATACGGAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCgg                                                                                                                         <  8:14905/149‑1 (MQ=255)                               gAGGATGCGGCCCAGGGTCTTGAGCTGTTCCTGAGCGCCGATACGGAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCAt                                                                                                                                  <  4:1597/138‑1 (MQ=255)                               gAGGATGCGGCCCAGGGTCTTGAGCTGTTCCTGAGCGCCGATACGGAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCAt                                                                                                                                  >  3:1597/1‑138 (MQ=255)                                aGGATGCGGCCCAGGGTCTTGAGCTGTTCCTGAGCGCCGATACGGAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGc                                                                                                                       <  4:320450/148‑1 (MQ=255)                                aGGATGCGGCCCAGGGTCTTGAGCTGTTCCTGAGCGCCGATACGGAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGc                                                                                                                       <  6:297201/148‑1 (MQ=255)                                aGGATGCGGCCCAGGGGCTTGAGCTGTTCCTGAGCGCCGATACGGAAGCTGTCCATGCTTACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGc                                                                                                                       <  5:109290/148‑1 (MQ=255)                                   aTGCGGCCCAGGGTCTTGAGCTGTTCCTGAGCGCCGATACGGAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGAc                                                                                                                   >  3:380982/1‑149 (MQ=255)                                     gCGGCCCAGGGTCTTGAGCTGTTCCTGAGCGCCGATACGGAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCa                                                                                                                 >  6:139546/1‑149 (MQ=255)                                     gCGGCCCAGGGTCTTGAGCTGTTCCTGAGCGCCGATACGGAAGCTGTCAATGCTAACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCa                                                                                                                 >  6:48297/1‑149 (MQ=255)                                      cGGCCCAGGGTCTTGAGCTGTTCCTGAGCGCCGATACGGAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCAt                                                                                                                <  6:377852/149‑1 (MQ=255)                                       ggCCCAGGGTCTTGAGCTGTTCCTGAGCGCCGATACGGAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATg                                                                                                               >  8:1246/1‑149 (MQ=255)                                                tCTTGAGCTGTTCCTGAGCGCCGATACGGAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATcacc                                                                                                      <  8:261121/149‑1 (MQ=255)                                                tCTTGAGCTGTTCCTGAGCGCCGATACGGAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATcacc                                                                                                      <  4:338056/149‑1 (MQ=255)                                                  ttGAGCTGTTCCTGAGCGCCGATACGGAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATcacccc                                                                                                    >  8:338277/1‑149 (MQ=255)                                                  ttGAGCTGTTCCTGAGCGCCGATACGGAAGCTGTCCATGATCACAAGAGCCAGGTTCTGCGCGACGTACTTGAGCACGTAGAGCGCGGCCAGCTTGGCCAGGGTGGTGCTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATcaccc                                                                                                     >  3:360753/1‑148 (MQ=255)                                                    gAGCTGTTCCTGAGCGCCGATACGGAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGACAGCTTGGCCAGCGTGGTGGACTTGCCCATGCCCGCCGGGCCGACCATGGCGATcaccccac                                                                                                  >  7:145542/1‑149 (MQ=255)                                                       accgcggcgatcgaagagccgcgccaggcctggcgcatgcggctggctcacttggcacggatgatcgaagtgcctgaaatcgagccgatcgaagAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATcaccccacc                                                                                                 >  4:341379‑M1/95‑147 (MQ=255)                                                           ccgagatcgaagagccgcgccaggcctggcgcatgctgctggctcacttggcacggatgatcgaagtgcctgaaatcgagccgatcgaagAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTc                                                                                           >  4:203856‑M1/91‑149 (MQ=255)                                                            cgagatcgaagagccgcgccaggcctggcgcatgctgctggctcacttggcacggatgatcgaagtgcctgaaatcgagccgatcgaagAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTc                                                                                           <  4:274092‑M1/59‑1 (MQ=255)                                                              agatcgaagagccgcgccaggcctggcgcatgctgctggctcacttggcacggatgatcgaagtgcctgaaatcgagccgatcgaagAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGAt                                                                                        >  3:274092‑M1/88‑149 (MQ=255)                                                                  cgcCGATACGGAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGc                                                                                    <  5:127705/149‑1 (MQ=255)                                                                     cGATACGGAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCggg                                                                                                                        <  8:255082/110‑1 (MQ=255)                                                                     cGATACGGAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCggg                                                                                                                        >  7:255082/1‑110 (MQ=255)                                                                           ggAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCCCCCTCTTCGATCGGCTCGAttt                                                                             >  7:365134/1‑147 (MQ=255)                                                                           ggAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCa                                                                           <  8:145542/149‑1 (MQ=255)                                                                              aGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAgg                                                                         >  3:15872/1‑148 (MQ=255)                                                                                   tCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTc                                                                   >  3:50155/1‑149 (MQ=255)                                                                                   tCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTc                                                                   >  2:37277/1‑149 (MQ=255)                                                                                   tCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTc                                                                   >  3:86220/1‑149 (MQ=255)                                                                                   tCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTc                                                                   >  3:91510/1‑149 (MQ=255)                                                                                     cATGCTCACCAGCGCCATGTTCTGCGCGACGTACTTGAGCACGTCGCGCGCGGCCAGCGTGGCAAGGGTGGTGGGCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGa                                                                 <  4:273162/149‑1 (MQ=255)                                                                                       tGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGTCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGatc                                                               <  5:48297/149‑1 (MQ=255)                                                                                       tGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGatc                                                               <  5:139546/149‑1 (MQ=255)                                                                                          tCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGatcatc                                                            >  3:226308/1‑149 (MQ=255)                                                                                            aCCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATcc                                                           <  4:380982/148‑1 (MQ=255)                                                                                             ccAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGt                                                         <  7:1246/149‑1 (MQ=255)                                                                                                    cAGGTGCGGCGCGCCCTACAGCCGCACGTACCGCGCGGCCAGCTTGGCCAGGGGGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGACCACCCCACCCTCTCCCATCGGCGCGTTTTCAGGCACTTCGACCATCCGTGCCAAgg                                                  <  6:265904/149‑2 (MQ=255)                                                                                                       gTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGGGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAg                                               <  7:11363/149‑1 (MQ=255)                                                                                                        ttCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACtt                                                                    <  6:70178/127‑1 (MQ=255)                                                                                                        ttCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACtt                                                                    >  5:70178/1‑127 (MQ=255)                                                                                                         tCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGcc                                             <  4:15872/149‑1 (MQ=255)                                                                                                                  cGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATg                                    >  2:158178/1‑149 (MQ=255)                                                                                                                         gAGCACGTAGCGCGCTGCCAGCTTGGCCAGGGTGGTGGTCTTGACCATTCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAg                              <  4:91510/148‑1 (MQ=255)                                                                                                                         gAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGAGCTTGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAg                              <  4:86220/148‑1 (MQ=255)                                                                                                                         gAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAgg                             >  7:303265/1‑149 (MQ=255)                                                                                                                            cACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGACCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCt                          <  4:115253/149‑1 (MQ=255)                                                                                                                              cGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCACCAGCATGCGCCAGGCCTgg                        <  4:115310/149‑1 (MQ=255)                                                                                                                                  gcgcgcGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGgcgc                     <  1:158178/148‑1 (MQ=255)                                                                                                                                    gcgcgGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAACTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGc                  >  2:372586/1‑149 (MQ=255)                                                                                                                                    gcgcgGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGACCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGTACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGc                  >  2:42848/1‑149 (MQ=255)                                                                                                                                         gacAGCTTGGCCTGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGCTCTTc             <  3:337711/147‑1 (MQ=255)                                                                                                                                          ccAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGCTCTTc             >  5:359051/1‑148 (MQ=255)                                                                                                                                             gCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGCTCTTCGAtc         >  7:358172/1‑149 (MQ=255)                                                                                                                                                    cAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGCCCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGCTCTTCGATCTcggcgg  >  7:280022/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                    GCCCGGGTCGACGTAAGTCACCGGCACGTTGAGGATGCGGCCCAGGGTCTTGAGCTGTTCCTGAGCGCCGATACGGAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGCTCTTCGATCTCGGCGG  >  NC_002947/4933603‑4933898

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.