New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4933751 =	61 (0.980)	4 (0.070)	4/252	NT	6.9%	coding (698/1308 nt)	flhF	flagellar biosynthesis protein FlhF
	?	NC_002947	4933806 =	51 (0.870)					coding (643/1308 nt)	flhF	flagellar biosynthesis protein FlhF

TCCTGAGCGCCGATACGGAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGCTCTTCGATCTCGGCGGTCAGGTCCAGCAGCTCGCGGG‑CGATCGGCCCGGACAGGCCGATGCGCTGCAGGCGG  >  NC_002947/4933661‑4933954                                                                                                                                                  |                                                                                                                                                      ccgagatcgaagagccgcgccaggcctggcgcatgctgctggctcacttggcacggatgatcgaagtgcctgaaatcgagccgatcgaagAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTc                                                                                                                                                    >  4:203856‑M1/91‑149 (MQ=255)  cgagatcgaagagccgcgccaggcctggcgcatgctgctggctcacttggcacggatgatcgaagtgcctgaaatcgagccgatcgaagAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTc                                                                                                                                                    <  4:274092‑M1/59‑1 (MQ=255)    agatcgaagagccgcgccaggcctggcgcatgctgctggctcacttggcacggatgatcgaagtgcctgaaatcgagccgatcgaagAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGAt                                                                                                                                                 >  3:274092‑M1/88‑149 (MQ=255)        cgcCGATACGGAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGc                                                                                                                                             <  5:127705/149‑1 (MQ=255)                 ggAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCCCCCTCTTCGATCGGCTCGAttt                                                                                                                                      >  7:365134/1‑147 (MQ=255)                 ggAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCa                                                                                                                                    <  8:145542/149‑1 (MQ=255)                    aGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAgg                                                                                                                                  >  3:15872/1‑148 (MQ=255)                         tCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTc                                                                                                                            >  3:91510/1‑149 (MQ=255)                         tCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTc                                                                                                                            >  3:86220/1‑149 (MQ=255)                         tCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTc                                                                                                                            >  3:50155/1‑149 (MQ=255)                         tCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTc                                                                                                                            >  2:37277/1‑149 (MQ=255)                           cATGCTCACCAGCGCCATGTTCTGCGCGACGTACTTGAGCACGTCGCGCGCGGCCAGCGTGGCAAGGGTGGTGGGCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGa                                                                                                                          <  4:273162/149‑1 (MQ=255)                             tGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGTCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGatc                                                                                                                        <  5:48297/149‑1 (MQ=255)                             tGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGatc                                                                                                                        <  5:139546/149‑1 (MQ=255)                                tCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGatcatc                                                                                                                     >  3:226308/1‑149 (MQ=255)                                  aCCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATcc                                                                                                                    <  4:380982/148‑1 (MQ=255)                                   ccAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGt                                                                                                                  <  7:1246/149‑1 (MQ=255)                                          cAGGTGCGGCGCGCCCTACAGCCGCACGTACCGCGCGGCCAGCTTGGCCAGGGGGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGACCACCCCACCCTCTCCCATCGGCGCGTTTTCAGGCACTTCGACCATCCGTGCCAAgg                                                                                                           <  6:265904/149‑2 (MQ=255)                                             gTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGGGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAg                                                                                                        <  7:11363/149‑1 (MQ=255)                                              ttCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACtt                                                                                                                             >  5:70178/1‑127 (MQ=255)                                              ttCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACtt                                                                                                                             <  6:70178/127‑1 (MQ=255)                                               tCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGcc                                                                                                      <  4:15872/149‑1 (MQ=255)                                                        cGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATg                                                                                             >  2:158178/1‑149 (MQ=255)                                                               gAGCACGTAGCGCGCTGCCAGCTTGGCCAGGGTGGTGGTCTTGACCATTCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAg                                                                                       <  4:91510/148‑1 (MQ=255)                                                               gAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGAGCTTGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAg                                                                                       <  4:86220/148‑1 (MQ=255)                                                               gAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAgg                                                                                      >  7:303265/1‑149 (MQ=255)                                                                  cACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGACCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCt                                                                                   <  4:115253/149‑1 (MQ=255)                                                                    cGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCACCAGCATGCGCCAGGCCTgg                                                                                 <  4:115310/149‑1 (MQ=255)                                                                        gcgcgcGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGgcgc                                                                              <  1:158178/148‑1 (MQ=255)                                                                          gcgcgGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAACTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGc                                                                           >  2:372586/1‑149 (MQ=255)                                                                          gcgcgGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGACCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGTACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGc                                                                           >  2:42848/1‑149 (MQ=255)                                                                               gacAGCTTGGCCTGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGCTCTTc                                                                      <  3:337711/147‑1 (MQ=255)                                                                                ccAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGCTCTTc                                                                      >  5:359051/1‑148 (MQ=255)                                                                                   gCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGCTCTTCGAtc                                                                  >  7:358172/1‑149 (MQ=255)                                                                                    atcgaagagggtggggtgatcgccatggtcggcccggcgggcatgggcaagaccaccaccctCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGCTCTTCGAtct                                                                 >  3:274092‑M2/63‑149 (MQ=255)                                                                                       gaagagggtggggtgatcgccatggtcggcccggcgggcatgggcaagaccaccaccctCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGCTCTTCGATCTcgg                                                              >  4:203856‑M2/60‑149 (MQ=255)                                                                                       gaagagggtggggtgatcgccatggtcggcccggcgggcatgggcaagaccaccaccctCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGCTCTTCGATCTcg                                                               <  4:274092‑M2/89‑1 (MQ=255)                                                                                          cAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGCCCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGCTCTTCGATCTcggcgg                                                           >  7:280022/1‑149 (MQ=255)                                                                                            GGGTGGTCGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCCCCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGCTCTTCGATCTCGGCGGTc                                                         >  4:219939‑M1/1‑149 (MQ=255)                                                                                             ggtggggtgatcgccatggtcggcccggcgggcatgggcaagaccaccaccctCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCCGCATGCGCCAGGCCTGGCGCGGCTCTTCGATCGCCGCGGt                                                          >  4:341379‑M2/54‑147 (MQ=255)                                                                                                 GTGGTCTTGCCCTGGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGCTCGGCTCTATTTCAGGCACTTCGATCATGCGTGCCATGTGAGCCAGCAGCAGGCGCCAGGCCTGGCGCGGCTCTTCGATCTCGGCGGTCAGGt                                                     >  1:372586‑M1/1‑148 (MQ=255)                                                                                                  tggtCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGCTCTTCGATCTCGGCGGTCAGGTc                                                    >  3:341333/1‑148 (MQ=255)                                                                                                    gtCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGa                                                                                                         <  1:340918/93‑1 (MQ=255)                                                                                                    gtCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGa                                                                                                         >  2:340918/1‑93 (MQ=255)                                                                                                    gtCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGCTCTTCGATCTCGGCGGTCAGGTCcag                                                 <  2:292050/149‑1 (MQ=255)                                                                                                         ccccATGCCGGCGGGGCTGACCATGGCGATCCCCCTAGCCTTTTCTCTCGGGTTGTTTTCTTCCAATTTGATCCTCCGTGCCAAGTTTCGCTGCATCTTGCGCCAGGCCGGGCGCGGCTCTTCGATCTCGGCGGTCAGGTCCagcagc                                             <  4:360753/147‑1 (MQ=255)                                                                                                          cccATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGa                                                                                                         <  6:380934/87‑1 (MQ=255)                                                                                                          cccATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGa                                                                                                         >  5:380934/1‑87 (MQ=255)                                                                                                          cccATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGCTCTTCGATCTCGGCGGTCAGGTCcagc                                                >  1:41434/1‑144 (MQ=255)                                                                                                           ccATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGCTCTTCGATCTCGGCGGTCAGGTCCAGCAGCTcg                                          >  3:362105/1‑149 (MQ=255)                                                                                                            cATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGCTCTTCGATCTCGGCGGTCAGGTCCAGCAGCTcgc                                         >  5:214333/1‑149 (MQ=255)                                                                                                              tGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAAGCCTGGCGCGGCTCTTCGATCTCGGCGGTCAGGTCCAGCAGCTCGCgg                                       <  3:97865/149‑1 (MQ=255)                                                                                                                cccGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGTCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGCTCTTCGATCTCGGCGGTCAGGTCCAGCAGCTCGCGGG‑c                                    >  1:301645/1‑149 (MQ=255)                                                                                                                    ccgGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGCTCTTCGATCTCGGCGGTCAGGTCCAGCAGCTCGCGGG‑CGATc                                <  7:338277/149‑1 (MQ=255)                                                                                                                       ggCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCTATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGCTCTTCGATCTCGGCGGTCAGGTCCAGCAGCTCGCGGG‑CGATCGGc                             <  6:359051/149‑1 (MQ=255)                                                                                                                        gCCGACCCGGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCAGCCGGGCCAAGGGCGCCACCCGCATGCGCCAGGCCGGGCGCGGCTCTTCGATCTCGGCGGTCAGGTCCAGCAGCTCGCGGG‑CGATCGGcc                            <  1:154726/149‑1 (MQ=255)                                                                                                                         ccGACCATGGCGATCACCCCACCCTCTTCGCTCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGCTCTTCGATCTCGGCGGTCAGGTCCAGCAGCTCGCGGG‑CGATCGGccc                           <  8:303265/149‑1 (MQ=255)                                                                                                                          cGACCATGGCCACCACCCCCCCCTCTTCGAGCGGCTCGATTTCAGCCACTTCGATCACCCGGGCCAAGTGAGCCAGCAGCATGCGCCCGGCCTGCCGCGGCTCTTCGATCTCGGCGGTCAGGGCCAGCAGCTCGCGGG‑CGATCGGCCCg                          <  4:341333/149‑1 (MQ=255)                                                                                                                             ccATGGCGATCACCCCACGCTCTTCGCTCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAATCGAGCCAGCAGCATGCGCCAGGCCTGTCGCGGCTCTTCGATCTCGGCGGTCAGGTCCAGCAGCTCGCGGGCCGATCGcccgcga                        <  8:365134/149‑5 (MQ=255)                                                                                                                                  gCGATCACCCCACCCTCTTCGATCGGCTCGATTTCTGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGCTCTTCGATCTCGGCGGTCAGGTCCAGCAGCTCGCGGG‑CGATCGGCCCGGACAGGc                   <  4:50155/148‑1 (MQ=255)                                                                                                                                         caccacccTCTCCGAGCGGCTCGATTCCCGCCACTTCCATCACCCGCGCCATGGCACCCACCACCAGGCGCCCGCCCGGCCGCGGCTCTTCGATCTCGGCGGTCAGGTCCAGCAGCTCGCGGG‑CGATCGGCCCGGACAGGCCGATgcgc           <  3:203856/147‑1 (MQ=255)                                                                                                                                          cccacccTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGCTCTTCGATCTCGGCGGTCAGGTCCAGCAGCTCGCGGG‑CGATCGGCCCGGACAGGCCGATGCGCt          >  2:360934/1‑149 (MQ=255)                                                                                                                                           ccaccctCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGCTCTTCGATCTCGGCGGTCAGGTCCAGCAGCTCGCGGG‑CGATCGGCCCGGACAGGCCGATGCGCTg         >  5:189693‑M2/8‑149 (MQ=255)                                                                                                                                            caccctCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGCTCTTCGATCTCGGCGGTCAGGTCCAGCAGCTCGCGGG‑CGATCGGCCCGGACAGGCCGATGCGCTg         >  1:43763‑M2/7‑148 (MQ=255)                                                                                                                                            caccctCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGCTCTTCGATCTCGGCGGTCAGGTCCAGCAGCTCGCGGG‑CGATCGGCCCCGACAGGCCGATGCGCTg         >  6:247491‑M2/7‑148 (MQ=255)                                                                                                                                                 tCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGCTCTTCGATCTCGGCGGTCAGGTCCAGCAGCTCGCGGG‑CGATCGGCCCGGACAGGCCGATGCGCTGCAGGCg   >  1:233024‑M2/2‑149 (MQ=255)                                                                                                                                                 tCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGCTCTTCGATCTCGGCGGTCAGGTCCAGCAGCTCGCGGG‑CGATCGGCCCGGACAGGCCGATGCGCTGCAGGCg   >  1:227304‑M2/2‑149 (MQ=255)                                                                                                                                                  ctTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGCTCTTCGATCTCGGCGGTCAGGTCCAGCAGCTCGCGGG‑CGATCGGCCCGGACAGGCCGATGCGCTGCAggcgg  >  2:15836/1‑149 (MQ=255)                                                                                                                                                  |                                                                                                                                                      TCCTGAGCGCCGATACGGAAGCTGTCCATGCTCACCAGCGCCAGGTTCTGCGCGCCGTACTTGAGCACGTAGCGCGCGGCCAGCTTGGCCAGGGTGGTGGTCTTGCCCATGCCCGCCGGGCCGACCATGGCGATCACCCCACCCTCTTCGATCGGCTCGATTTCAGGCACTTCGATCATCCGTGCCAAGTGAGCCAGCAGCATGCGCCAGGCCTGGCGCGGCTCTTCGATCTCGGCGGTCAGGTCCAGCAGCTCGCGGG‑CGATCGGCCCGGACAGGCCGATGCGCTGCAGGCGG  >  NC_002947/4933661‑4933954

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.