New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5377629 =	60 (0.970)	3 (0.050)	3/248	NT	5.0%	intergenic (‑65/+37)	dnaK/grpE	chaperone protein DnaK/heat shock protein GrpE
	?	NC_002947	5377675 =	57 (0.990)					coding (549/558 nt)	grpE	heat shock protein GrpE

CGATGACTTTGACGTTACCGTTTTCCAGAATGGAGACGCACGAGTTGGTGGTCCCCAGGTCGATACCGATGATTTTACCCATGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTT  >  NC_002947/5377483‑5377776                                                                                                                                                     |                                                                                                                                                     catggccatgcaggaaaacgccgaggtctagccaaacagcgtgttgaacgtgttccagaagggttacctgctgaacggccgcctgctgcgccccgccattgtggtggtcagcaaggcgccgagcgcttcgcaaccctcgatcaatgaaa                                                                                                                                                      >  1:297272‑M1/149‑149 (MQ=255) cGATGACTTTGACGTTACGGTTTTCCAGAATGGAGACGCACGAGTTGGTGGTCCCCAGGTCGATACCGATGATTTTACCCATGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGaa                                                                                                                                                     <  2:164095/148‑1 (MQ=255)  gATGACTTTGACGTTACCGTTTTCCAGAATGGAGACGCACGAGTTGGTGGTCCCCAGGTCGATACCGATGATTTTACCCATGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAg                                                                                                                                                    >  5:327081/1‑148 (MQ=255)  gATGACTTTGACGTTACCCTTTTCCAGAATGGAGACGCACGAGTTGGTGGTCCCCAGGTCGATACCGATGATTTTACCCATGTTAACTCTCCCGCAACTTGAATTTGGTAGCAGAGACTACTTTCG‑‑CCAACTGCGGTAATACTTTAAg‑g                                                                                                                                                  >  8:353538/1‑149 (MQ=255)  ccatcacttGACGTTACCGTTTTCCAGAATGGAGACGCACGAGTTGGTGGTCCCCAGGTCGATACCGATGATTTTACCCATGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAg                                                                                                                                                    <  3:188365/141‑1 (MQ=255)      aCTTTGACGTTACCGTTTTCCAGAATGGAGACGCACGAGTTGGTGGTCCCCAGGTCGATACCGATGATTTTACCCATGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCtt                                                                                                                                               <  2:85083/148‑1 (MQ=255)       cTTTGACGTTACCGTTTTCCAGAATGGAGACGCACGAGTTGGTGGTCCCCAGGTCGATACCGATGATTTTACCCATGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGa                                                                                                                                             <  4:125010/149‑1 (MQ=255)        tttGACGTTACCGTTTTCCAGAATGGAGACGCACGAGTTGGTGGTCCCCAGGTCGATACCGATGATTTTACCCATGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGac                                                                                                                                            >  2:263810/1‑149 (MQ=255)        atgcaggaaaacgccgaggtcgagccaaacagcgtgttgaacgtgttccagaagggttacctgctgaacggccgcctgctgcgccccgccatggtggtggtcagcaaggcgccgagcgcggcgcaaccctcgatcaatgaaAAG‑GCtt                                                                                                                                               <  4:352844‑M1/7‑1 (MQ=255)         tgcaggaaaacgccgaggtcgagccaaacagcgtgttgaacgtgttccagaagggttacctgctgaacggccgcctgctgcgccccgccatggtggtggtcagcaaggcgccgagcgcggcgcaaccctcgatcaatgaaAAG‑GCTTGa                                                                                                                                             >  2:77673‑M1/141‑149 (MQ=255)          gcaggaaaacgccgaggtcgagccaaacagcgtgttgaacgtgttccagaagggttacctgctgaacggccgcctgctgcgccccgccatggtggtggtcagcaaggcgccgagcgcggcgcaaccctcgatcaatgaaAAG‑GCTTGa                                                                                                                                             <  7:46149‑M1/9‑1 (MQ=255)            aCGTTACCGTTTTCCAGAATGGAGACGCACGAGTTGGTGGTCCCCAGGTCGATACCGATGATTTTACCCATGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACAcc                                                                                                                                         >  8:320921/1‑148 (MQ=255)             cGTTACCGTTTTCCAGAATGGAGACGCACGAGTTGGTGGTCCCCAGGTCGATACCGATGATTTTACCCATGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCt                                                                                                                                        <  6:110388/148‑1 (MQ=255)              gTTACCGTTTTCCAGAATGGAGACGCACGAGTTGGTGGTCCCCAGGTCGATACCGATGATTTTACCCATGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACAcc                                                                                                                                         >  8:55614/1‑146 (MQ=255)              gTTACCGTTTTCCAGAATGGAGACGCACGAGTTGGTGGTCCCCAGGTCGATACCGATGATTTTACCCATGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAg                                                                                                                                      <  1:26078/149‑1 (MQ=255)                 aCCGTTTTCCAGAATGGAGACGCACGAGTTGGTGGTCCCCAGGTCGATACCGATGATTTAACCCATGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATg                                                                                                                                   <  6:184769/149‑1 (MQ=255)                  ccGTTTTCCAGAATGGAGACGCAAGAGTTGGTGGTCCCCAGGTCGATACCGATGATTTTACCCATGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTAGTTTGG‑‑CCAACTGCGGTAATAGTTGAAG‑GCTTGACACCTAGATgt                                                                                                                                  <  4:172508/149‑2 (MQ=255)                   cGTTTTCCAGAATGGAGACGCACGAGTTGGTGGTCCCCAGGTCGATACCGATGATTTTACCCATGTTAACTCTCCCGAAACTTGAATTTGGTAGAAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATggg                                                                                                                                 >  1:318986/1‑149 (MQ=255)                     ttttCCAGAATGGAGACGCACGAGTTGGTGGTCCCCAGGTCGATACCGATGATTTTACCCATGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACATCTAGATGGGGa                                                                                                                               >  4:303175/1‑149 (MQ=255)                          cAGAATGGAGACGCACGAGTTGGTGGTCCCCAGGTCGATACCGATGATTTTACCCATGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTg                                                                                                                                              <  6:12612/129‑1 (MQ=255)                          cAGAATGGAGACGCACGAGTTGGTGGTCCCCAGGTCGATACCGATGATTTTACCCATGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTg                                                                                                                                              >  5:12612/1‑129 (MQ=255)                                      gCACGAGTTGGTGGTCCCCAGGTCGATACCGATGATTTTACCCATGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTc                                                                                                               >  7:193345/1‑148 (MQ=255)                                         cGAGTTGGTGGTCCCCAGGTCGATACCGATGATTTTACCCATGTAAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGc                                                                                                           <  6:327081/149‑1 (MQ=255)                                                gtggtCCCCAGGTCGATACCGATGATTTTACCCATGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCa                                                                                                    <  1:263810/149‑1 (MQ=255)                                                acgtgttccagaagggttacctgctgaacggccgcctgctgcgccccgccatggtggtggtcagcaaggcgccgagcgcggcgcaaccctcgatcaatgaaAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCttt                                                                                                       <  4:71696‑M1/47‑1 (MQ=255)                                                 tggtCCCCAGGTCGATACCGATGATTTTACCCATGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCa                                                                                                              >  8:228717/1‑138 (MQ=255)                                                 tggtCCCCAGGTCGATACCGATGATTTTACCCATGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCa                                                                                                              <  7:228717/138‑1 (MQ=255)                                                  gtgttccagaagggttacctgctgaacggccgcctgctgcgccccgccatggtggtggtcagcaaggcgccgagcgcggcgcaaccctcgatcaatgaaAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCa                                                                                                    >  6:111988‑M1/100‑149 (MQ=255)                                                   tgttccagaagggttacctgctgaacggccgcctgctgcgccccgccatggtggtggtcagcaaggcgccgagcgcggcgcaaccctcgatcaatgaaAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCAt                                                                                                   >  3:71696‑M1/99‑149 (MQ=255)                                                       ccAGGGCGATACCGATGATTTTACCCATGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCAACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAGCTCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATc                                                                                              <  1:296677/149‑1 (MQ=255)                                                        cAGGTCGATACCGATGATTTTACCCATGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATc                                                                                              >  2:49977/1‑147 (MQ=255)                                                           gTCGATACCGATGATTTTACCCATGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAggg                                                                                         >  6:253197/1‑149 (MQ=255)                                                           gTCGATACCGATGATTTTACCCATGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAggg                                                                                         >  4:151823/1‑149 (MQ=255)                                                             cGATACCGATGATTTTACCCATGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGCtt                                                                                       >  7:78213/1‑149 (MQ=255)                                                              gATACCGATGATTTTACCCATGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGGAAGAAACTGCGTTAATAGTTGAAG‑GCTTGACACATAGAGGGGGATGCCCCGAAGTATTACAAGCATTATCTTTTATCGAggtt                                                                                        >  1:115939/1‑147 (MQ=255)                                                                     atgatTTTACCCATGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCcgcg                                                                               >  2:373649/1‑149 (MQ=255)                                                                          tttACCCATGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCgg                                                                          >  1:337215/1‑149 (MQ=255)                                                                           ttACCCATGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCgg                                                                          <  7:320921/148‑1 (MQ=255)                                                                            tACCCATGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGgcg                                                                        >  7:259728/1‑149 (MQ=255)                                                                               ccAAGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCt                                                                     <  6:66648/149‑1 (MQ=255)                                                                                 aTGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTg                                                                   <  5:253197/149‑1 (MQ=255)                                                                                  tGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCTCTCGGCGCCTTGc                                                                  <  2:337215/149‑1 (MQ=255)                                                                                    ttAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAg                                                                                                            >  5:107403/1‑105 (MQ=255)                                                                                    ttAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAg                                                                                                            <  6:107403/105‑1 (MQ=255)                                                                                    ttAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCt                                                                 <  4:320301/148‑1 (MQ=255)                                                                                         tctcCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGaccac                                                           >  7:64428/1‑149 (MQ=255)                                                                                           tcCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGaccac                                                           <  8:259728/147‑1 (MQ=255)                                                                                            cccGAAACTTGAATTTGGTAGCAGCGCCTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGacccccac                                                        >  4:237861/1‑149 (MQ=255)                                                                                             ccGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGaccacca                                                         <  1:49977/147‑1 (MQ=255)                                                                                                aaaCTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACATCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATg                                                    <  3:303175/149‑1 (MQ=255)                                                                                                 aaCTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATgg                                                   <  1:99107/149‑1 (MQ=255)                                                                                                  aCTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGc                                                  <  1:373649/149‑1 (MQ=255)                                                                                                   cTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCg                                                 <  3:151823/149‑1 (MQ=255)                                                                                                      gAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCggg                                               <  3:355929/148‑1 (MQ=255)                                                                                                           tGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCgca                                          <  8:218039/148‑1 (MQ=255)                                                                                                              tAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGcagcag                                      >  4:64432/1‑149 (MQ=255)                                                                                                              tAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGcagcag                                      >  8:195296/1‑149 (MQ=255)                                                                                                                gcagcGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAgg                                     <  8:64428/148‑1 (MQ=255)                                                                                                                 cagcGACTACGTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTCGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAggcg                                   <  4:216106/149‑1 (MQ=255)                                                                                                                  agcGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAggcgg                                  <  3:74672/149‑1 (MQ=255)                                                                                                                   gcGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAggcggc                                 >  5:345763/1‑149 (MQ=255)                                                                                                                    cGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGcc                                <  7:195296/149‑1 (MQ=255)                                                                                                                       ctactTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGtt                             >  6:63918/1‑149 (MQ=255)                                                                                                                          ctTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTca                           <  2:318986/148‑1 (MQ=255)                                                                                                                          ctTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTca                           <  6:273695/148‑1 (MQ=255)                                                                                                                           tttGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTcag                          >  7:320192/1‑148 (MQ=255)                                                                                                                             tGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTcagca                        <  7:55614/148‑1 (MQ=255)                                                                                                                                   cAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTaa                   <  3:64432/149‑1 (MQ=255)                                                                                                                                      cTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCATTCAGCAGGTAAccc                <  2:115939/149‑1 (MQ=255)                                                                                                                                         cGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCCCCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTc             >  3:146406/1‑149 (MQ=255)                                                                                                                                           gTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTg           >  6:393063/1‑149 (MQ=255)                                                                                                                                                aCTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAaca      >  5:186592/1‑149 (MQ=255)                                                                                                                                                  ttGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACg    >  5:5121/1‑149 (MQ=255)                                                                                                                                                    gAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACg    <  8:320192/147‑1 (MQ=255)                                                                                                                                                    gAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGt   <  5:63918/148‑1 (MQ=255)                                                                                                                                                    gAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCAAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGtt  >  3:28980/1‑149 (MQ=255)                                                                                                                                                     AAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCGGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGtt  >  8:78213‑M1/1‑148 (MQ=255)                                                                                                                                                     |                                                                                                                                                     CGATGACTTTGACGTTACCGTTTTCCAGAATGGAGACGCACGAGTTGGTGGTCCCCAGGTCGATACCGATGATTTTACCCATGTTAACTCTCCCGAAACTTGAATTTGGTAGCAGCGACTACTTTGG‑‑CCAACTGCGGTAATACTTGAAG‑GCTTGACACCTAGATGGGGATGCCCCGAAGGATTTCAAGCCTTTTCATTGATCGAGGGTTGCGCCGCGCTCGGCGCCTTGCTGACCACCACCATGGCGGGGCGCAGCAGGCGGCCGTTCAGCAGGTAACCCTTCTGGAACACGTT  >  NC_002947/5377483‑5377776

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.