New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	572584 =	72 (1.160)	4 (0.070)	4/258	NT	5.2%	coding (506/1425 nt)	PP_0486	GntR family transcriptional regulator
	?	NC_002947	572614 =	75 (1.250)					coding (476/1425 nt)	PP_0486	GntR family transcriptional regulator

CAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGACAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGCCTAGCCACTCGCTCATGTGAGCGTCGTTGGGCTTGATGATCGAGAGGTCGATCTGGC  >  NC_002947/572470‑572758                                                                                                                                                 |                                                                                                                                                 cAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGACAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCttgttt                                                                                                                                              >  5:51281/1‑149 (MQ=255)   acgctcacatgagcgagtggctaggcacggctatcagcgaactggccgcctcatcggacttggggcaggtactcgactatgtgacagagggtggtcacacgtcccacaaacaAGCCAGCGCTGTATCCAGGTCGCACCGGCttgtttgt                                                                                                                                            >  4:85617‑M1/113‑149 (MQ=255)            gCACAGCACCACATCGTCACTCTTCGACAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACgtgt                                                                                                                                   >  3:58749/1‑149 (MQ=255)            gCACAGCACCACATCGTCACTCTTCGACAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACgtgt                                                                                                                                   <  5:165849/149‑1 (MQ=255)            gCACAGCACCACATCGTCACACTTCGACAGGCTGCTGATGTCCACCATCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGTTCGCACCGGCTTGTTTGTGGGACgtgt                                                                                                                                   <  8:184998/149‑1 (MQ=255)                    ccacATCGTCACTCTTCGACAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCAAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGaccacc                                                                                                                            >  7:143390/1‑148 (MQ=255)                     cacaTCGTCACTCTTCGACAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCct                                                                                                                          >  5:45516/1‑149 (MQ=255)                     cacaTCGTCACTCTTCGACAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCct                                                                                                                          >  6:89189/1‑149 (MQ=255)                      acaTCGTCACTCTTCGACAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCctc                                                                                                                         >  5:231091/1‑149 (MQ=255)                       caTCGTCACTGTTCGACAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCACCGAGCATCAGGCAGACAGCGCTGTATCCAGGTCGCACCGGGTTCTTTGTGCGACGTGTGACCACCctct                                                                                                                        >  5:290220/1‑149 (MQ=255)                       caTCGTCACTCTTCGACAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCctct                                                                                                                        <  4:58749/149‑1 (MQ=255)                            tCACTCTTCGACAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTcac                                                                                                                   <  8:34044/149‑1 (MQ=255)                              aCTCTTCGACAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTcaca                                                                                                                  <  6:107171/148‑1 (MQ=255)                                tctTCGACAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAg                                                                                                               >  5:244092/1‑149 (MQ=255)                                tctTCGACAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAg                                                                                                               >  3:63291/1‑149 (MQ=255)                                tctTCGACAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAg                                                                                                               >  5:80464/1‑149 (MQ=255)                                    cggcAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTc                                                                                                             <  2:385523/144‑1 (MQ=255)                                     gACAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGa                                                                                                           <  1:259028/148‑1 (MQ=255)                                      aCAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGacc                                                                                                                               <  2:329775/127‑1 (MQ=255)                                      aCAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGacc                                                                                                                               >  1:329775/1‑127 (MQ=255)                                           ctgctgGTGGCCATCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTg                                                                                                    >  2:380672/1‑149 (MQ=255)                                            tgctgATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGc                                                                                                   >  6:261604/1‑149 (MQ=255)                                              ctgATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGc                                                                                                   <  1:223070/147‑1 (MQ=255)                                              ctgATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGc                                                                                                   <  6:51281/147‑1 (MQ=255)                                               tgATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGccc                                                                                                 >  7:90435/1‑148 (MQ=255)                                               gccgcctcatcggacttggggcaggtactcgactatgtgacagagggtggtcacacgtcccacaaacaAGCCAGCGCTGTATCCAGGTCGCACCGGCtt                                                                                                                                                  >  8:202466‑M1/69‑99 (MQ=255)                                               gccgcctcatcggacttggggcaggtactcgactatgtgacagagggtggtcacacgtcccacaaacaAGCCAGCGCTGTATCCAGGTCGCACCGGCtt                                                                                                                                                  <  7:202466‑M1/31‑1 (MQ=255)                                                gATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGcccc                                                                                                >  6:313359/1‑148 (MQ=255)                                                    gCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTc                                                                                           <  6:244092/149‑1 (MQ=255)                                                     ccaccaGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTcc                                                                                          >  4:19312/1‑149 (MQ=255)                                                     ccaccaGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTcc                                                                                          <  4:356083/149‑1 (MQ=255)                                                      caccaGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTAc                                                                                                       <  3:52862/135‑1 (MQ=255)                                                      caccaGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTAc                                                                                                       >  4:52862/1‑135 (MQ=255)                                                      caccaGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTcc                                                                                          >  7:84253/1‑148 (MQ=255)                                                          agcagcCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGa                                                                                     <  3:260352/149‑1 (MQ=255)                                                          agcagcCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGa                                                                                     <  6:45516/149‑1 (MQ=255)                                                           gcagcCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGccc                                                                                                 <  8:276573/136‑1 (MQ=255)                                                                ccATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAggcggc                                                                               >  2:347333/1‑149 (MQ=255)                                                                ccATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAggcggc                                                                               >  1:287091/1‑149 (MQ=255)                                                                       gggCGCCAGCGGTCAGTACTACCTGCTGCCTGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCg                                                                        >  8:266201/1‑149 (MQ=255)                                                                        ggCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGc                                                                       >  3:296900/1‑149 (MQ=255)                                                                           gcCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGa                                                                    <  8:90435/149‑1 (MQ=255)                                                                            ccAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGAt                                                                   <  5:89189/149‑1 (MQ=255)                                                                                cGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCa                                                                             <  5:187004/135‑1 (MQ=255)                                                                                cGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCa                                                                             >  6:187004/1‑135 (MQ=255)                                                                                  gTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGt                                                             <  2:2629/149‑1 (MQ=255)                                                                                     aGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGc                                                           <  8:143390/148‑1 (MQ=255)                                                                                       tactacCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGcc                                                          >  7:307405/1‑147 (MQ=255)                                                                                       tactacCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGcc                                                          >  4:155809/1‑147 (MQ=255)                                                                                       tactacCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGCCTa                                                        <  5:313359/149‑1 (MQ=255)                                                                                         ctacCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGCCTAGc                                                      <  1:380672/149‑1 (MQ=255)                                                                                          tacCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGCCTAGcc                                                     >  5:109294/1‑149 (MQ=255)                                                                                              tgctgcCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACAACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGCCTAGCCACTc                                                 >  7:179443/1‑149 (MQ=255)                                                                                                 tgcCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTc                                                                                                                     >  8:210951/1‑78 (MQ=255)                                                                                                 tgcCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTc                                                                                                                     <  7:210951/78‑1 (MQ=255)                                                                                                     aGCGAGCATCAGGCAGCCAGTGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGCCTAGCCACTCGCTCAtg                                          >  6:375899/1‑149 (MQ=255)                                                                                                     aGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGCCTAGCCACTCGCTCAtg                                          >  6:55744/1‑149 (MQ=255)                                                                                                      gCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGCCTAGCCACTCGCTCAtgt                                         >  8:262274/1‑149 (MQ=255)                                                                                                        gAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGCCTAGCCACTCGCTCATGTGa                                       <  6:109294/149‑1 (MQ=255)                                                                                                        gAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGCCTAGCCACTCGCTCATGTGa                                       <  7:266201/149‑1 (MQ=255)                                                                                                          gCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGCACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGCCTAGCCACTCGCTCATGTGAGc                                     <  6:231091/149‑1 (MQ=255)                                                                                                            acaaacaagccggtgcgacctggatacagcgctggctTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGCCTAGCCACTCGCTCATGTGAGcgt                                   >  4:85617‑M2/38‑149 (MQ=255)                                                                                                            aTCAGGCAGCCTCCGGTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGCCTAGCCACTCGCTCATGTGa                                       <  6:228857/145‑1 (MQ=255)                                                                                                            aTCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGCCTAGCCACTCGCTCATGTGAGcgt                                   <  3:19312/149‑1 (MQ=255)                                                                                                            aTCAGGCAGCCAGCGCTGTATCCAGGTCGCACCCGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCAGAAGAGGCGGCCAGTTCGCAGATAGCCGTGCCTAGCCACTCGCTCATGTGAgag                                    >  5:228857/1‑146 (MQ=255)                                                                                                              cAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGCCTAGCCACTCGCTCATGTGAGcgtcg                                 >  7:156370/1‑149 (MQ=255)                                                                                                                ggCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGCCTAGCCACTCGCTCATGTGAGCGTCGtt                               >  2:94247/1‑149 (MQ=255)                                                                                                                 gCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGCCTAGCCACTCGCTCATGTGAGCGTCGTTg                              >  4:294654/1‑149 (MQ=255)                                                                                                                  cagccagcGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGCCTAGCCACTCGCTCATGTGAGCGTCGTTgg                             <  2:287091/149‑1 (MQ=255)                                                                                                                  aagccggtgcgacctggatacagcgctggctTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAggcggc                                                                               <  7:202466‑M2/68‑1 (MQ=255)                                                                                                                  aagccggtgcgacctggatacagcgctggctTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAggcggc                                                                               >  8:202466‑M2/32‑99 (MQ=255)                                                                                                                     CCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGCCTAGCCACTCGCTCATGTGAGCGTCGTTGGGCt                          >  4:63291‑M1/1‑149 (MQ=255)                                                                                                                       agcGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGCCTAGCCACTCGCTCATGTGAGCGTCGTTGGGCTtg                        <  8:84253/149‑1 (MQ=255)                                                                                                                         cgcTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGCCTAGCCACTCGCTCATGTGAGCGTCGTTGGGCTtgat                      <  3:294654/149‑1 (MQ=255)                                                                                                                           cTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGCCTAGCCACTCGCTCATGTGAGCGTCGTTGGGCTtgatga                    <  1:94247/149‑1 (MQ=255)                                                                                                                            tGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGCCTAGCCACTCGCTCATGTGAGCGTCGTTGGGCTTgatgat                   >  2:198725/1‑149 (MQ=255)                                                                                                                              tATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGCCTAGCCACTCGCTCATGTGAGCGTCGTTGGGCTTgatgat                   <  3:155809/147‑1 (MQ=255)                                                                                                                              tATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGCCTAGCCACTCGCTCATGTGAGCGTCGTTGGGCTTGATGATc                  <  1:198725/148‑1 (MQ=255)                                                                                                                                tCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGCCTAGCCACTCGCTCATGTGAGCGTCGTTGGGCTTGATGATc                  >  2:389219/1‑146 (MQ=255)                                                                                                                                tCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGCCTAGCCACTCGCTCATGTGAGCGTCGTTGGGCTTGATGATCgag               <  1:347333/149‑1 (MQ=255)                                                                                                                                tCCAGGTCGCACCGGCTTGTTTGGGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGCCTAGCCACTCGCTCATGTGAGCGTCGTTGGGCTTGATGATCga                <  6:290220/148‑1 (MQ=255)                                                                                                                                  cAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGCCTAGCCACTCGCTCATGTGAGCGTCGTTGGGCTTGATGATCGagag             >  8:76569/1‑149 (MQ=255)                                                                                                                                    ggTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGCCTAGCCACTCGCTCATGTGAGCGTCGTTGGGCTTGATGATCGAGAGGt           <  5:55744/149‑1 (MQ=255)                                                                                                                                      cagcgctggctTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGCCTAGCCACTCGCTCATGTGAGCGTCGTTGGGCTTGATGATCGAGAGGTCg         <  3:85617‑M2/138‑1 (MQ=255)                                                                                                                                            cGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGCCTAGCCACTCGCTCATGTGAGCGTCGTTGGGCTTGATGATCGAGAGGTCGATCTgg   <  8:307405/149‑1 (MQ=255)                                                                                                                                             ggctTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGCCTAGCCACTCGCTCATGTGAGCGTCGTTGGGCTTGATGATCGAGAGGTCGATCTGGc  <  4:296900‑M2/145‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                 CAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGACAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAGTCCGATGAGGCGGCCAGTTCGCTGATAGCCGTGCCTAGCCACTCGCTCATGTGAGCGTCGTTGGGCTTGATGATCGAGAGGTCGATCTGGC  >  NC_002947/572470‑572758

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.