New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1524974	47 (0.760)	6 (0.100)	4/250	NT	11.6%	coding (606/1449 nt)	murC	UDP‑N‑acetylmuramate‑‑L‑alanine ligase
	?	NC_002947	= 1524995	47 (0.810)					coding (627/1449 nt)	murC	UDP‑N‑acetylmuramate‑‑L‑alanine ligase

GCAGCTGGGCACCAGCCGCTACCTGATCGCTGAAGCAGACGAAAGCGATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCGCCCGACCGTGACCTACGGCTTCAGCGAAGAGGCCGACATCCGCGCCAT  >  NC_002947/1524848‑1525141                                                                                                                                                    |                                                                                                                                                   gCAGCTGGGCACCAGCCGCTACCTGATCGCTGAAGCAGACGAAAGCGATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAa                                                                                                                                                   >  2:377351‑M2/1‑148 (MQ=255)      tGGGCACCAGCCACTACCTGATCGCTGAAGCAGACGAAAGCGATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAaccttc                                                                                                                                              <  2:385272‑M2/149‑7 (MQ=255)         gCACCAGCCGCTACCTGATCGCTGAAGCAGACGAAAGCGATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTtcgtc                                                                                                                                           <  5:356931/149‑1 (MQ=255)               gCCGCTACCTGATCGCTGAAGCAGACGAAAGCGATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTc                                                                                                                                     >  2:64273/1‑149 (MQ=255)                 cGCTACCTGATCGCTGAAGCAGACGAAAGCGATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCt                                                                                                                                   >  4:144594/1‑149 (MQ=255)                 cGCTACCTGATCGCTGAAGCAGACGAAAGCGATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCt                                                                                                                                   <  3:160306/149‑1 (MQ=255)                      ccTGATCGCTGAAGCAGACGAAAGCGATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGcac                                                                                                                               >  8:321075/1‑148 (MQ=255)                          aTCGCTGAAGCAGACGAAAGCGATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCt                                                                                                                          >  7:61535/1‑149 (MQ=255)                             gCTGAAGCAGACGAAAGCGATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGcc                                                                                                                       <  5:61379/149‑1 (MQ=255)                              cTGAAGCAGACGAAAGCGATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCg                                                                                                                      <  5:187497/149‑1 (MQ=255)                              cTGAAGCAGACGAAAGCGATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCg                                                                                                                      >  4:328598/1‑149 (MQ=255)                               tGAAGCAGACGAAAGCGATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGt                                                                                                                     >  5:248050/1‑149 (MQ=255)                                 aaGCAGACGAAAGCGATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGtt                                                                                                                    <  3:328598/148‑1 (MQ=255)                                 aaGCAGACGAAAGCGATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTc                                                                                                                   <  1:56995/149‑1 (MQ=255)                                    cAGACGAAAGCGATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTAt                                                                                                                >  4:109340/1‑149 (MQ=255)                                         gAAAGCGATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCt                                                                                                           >  8:284127/1‑149 (MQ=255)                                         gAAAGCGATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCt                                                                                                           <  8:61535/149‑1 (MQ=255)                                         gAAAGCGATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACATCAACAAGCCGAAGAAAACCTtcgtcg                                                                                                                                          >  8:204234/1‑118 (MQ=255)                                               gATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCg                                                                                                                      >  8:177917/1‑132 (MQ=255)                                               gATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCg                                                                                                                      <  7:177917/132‑1 (MQ=255)                                                     aGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGAtgtg                                                                                               <  3:341146/149‑1 (MQ=255)                                                      gCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGc                                                                                              <  2:124409/149‑1 (MQ=255)                                                          cctgcacctgcaGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTg                                                                                           >  5:47789/1‑148 (MQ=255)                                                           ctgcacctgcaGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGc                                                                                              >  2:183112/1‑144 (MQ=255)                                                           ctgcacctgcaGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGc                                                                                              <  1:183112/144‑1 (MQ=255)                                                              cacctgcaGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGgac                                                                                        <  1:385272/147‑1 (MQ=255)                                                                   gcaGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCgg                                                                                 >  2:267494/1‑149 (MQ=255)                                                                    caGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCgg                                                                                 <  3:144594/148‑1 (MQ=255)                                                                    caGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCgg                                                                                 <  1:64273/148‑1 (MQ=255)                                                                     aGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCggtg                                                                               <  2:86856/149‑1 (MQ=255)                                                                     aGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCggtg                                                                               <  5:193989/149‑1 (MQ=255)                                                                             gTCGCGGTTGGCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTcgcg                                                                        <  4:249882/148‑1 (MQ=255)                                                                              tCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCgag                                                                      <  7:321075/149‑1 (MQ=255)                                                                                gcgGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCgaga                                                                     <  6:47789/148‑1 (MQ=255)                                                                                gcgGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGAt                                                                    <  1:342053/149‑1 (MQ=255)                                                                                                 cGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAgc                                                   <  7:284127/149‑1 (MQ=255)                                                                                                   aCGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTGCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAgcgc                                                 <  2:344295/149‑1 (MQ=255)                                                                                                       cGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCGCCCGa                                             <  1:267494/149‑1 (MQ=255)                                                                                                       cGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCGCCCGa                                             >  2:17214/1‑149 (MQ=255)                                                                                                         aCCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCGCCCGAcc                                           >  5:149466/1‑149 (MQ=255)                                                                                                                ggCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAaccttcgtaggtcgccatgtggtcggcgtcgatgttggtgacaaccgcgaccatcggctgcaggtgcaggaagctggcatcgctttcgtctgcttcagcgatcaggtagcgg                                    <  6:163212‑M2/149‑113 (MQ=255)                                                                                                                      cTACGAAGGTGACTTCAACAAGCTGAAGAAAaccttcgtaggtcgccatgtggtcggcgtcgatgttggtgacaaccgcgaccatcggctgcaggtgcaggaagctggcatcgctttcgtctgcttccgcgatcaggtagcggctggtg                              <  8:325053‑M2/149‑119 (MQ=255)                                                                                                                      cTACGAAGGTGACTTCAACAAGCTGAAGAAAaccttcgtaggtcgccatgtggtcggcgtcgatgttggtgacaaccgcgaccatcggctgcaggtgcaggaagctggcatcgctttcgtctgcttcagcgatcaggtagcggctggtg                              <  7:233624‑M2/149‑119 (MQ=255)                                                                                                                      cTACGAAGGTGACTTCAACAAGCTGAAGAAAaccttcgtaggtcgccatgtggtcggcgtcgatgttggtgacaaccgcgaccatcggctgcaggtgcaggaagctggcatcgctttcgtctgcttcagcgatcaggtagcgg                                    >  5:64989‑M2/1‑31 (MQ=255)                                                                                                                      cTACGAAGGTGACTTCAACAAGCTGAAGAAAaccttcgtaggtcgccatgtggtcggcgtcgatgttggtgacaaccgcgaccatcggctgcaggtgcaggaagctggcatcgctttcgtctgcttcagcgatcaggtagcgg                                    <  6:64989‑M2/143‑113 (MQ=255)                                                                                                                        aCGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCGCCCGACCGTGACCTACGGCtt                             >  6:144513/1‑148 (MQ=255)                                                                                                                           aaGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCGCCCGACCGTGACCTACGGCTTCAGc                         >  4:189886/1‑149 (MQ=255)                                                                                                                              gTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCGCCCGACCGTGACCTACGGCTTCAGCGaa                      <  3:109340/149‑1 (MQ=255)                                                                                                                               tGACTTCAACAAGCTGAAGAAAaccttcgtaggtcgccatgtggtcggcgtcgatgttggtgacaaccgcgaccatcggctgcaggtgcaggaagctggcatcgctttcgtctgcttcagcgatcaggtagcggctggtgcccagctgc                     >  5:163212‑M2/1‑22 (MQ=255)                                                                                                                               tGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCGCCCGACCGTGACCTACGGCTTCAGCg                        >  5:322333/1‑146 (MQ=255)                                                                                                                               tGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCGCCCGACCGTGACCTACGGCTTCAGCGAag                     <  6:248050/149‑1 (MQ=255)                                                                                                                                   ttCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCGCCCGACCGTGACCTACGGCTTCAGCGAAGAGGc                 >  5:30002/1‑149 (MQ=255)                                                                                                                                       acaaGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCGCCCGACCGTGACCTACGGCTTCAGCGAAGAGGCCGAc             <  6:149466/149‑1 (MQ=255)                                                                                                                                        caaGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCGCCCGACCGTGACCTACGGCTTCAGCGAAGAGGCCGACa            >  5:57733/1‑149 (MQ=255)                                                                                                                                            cTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCGCCCGACCGTGAc                                      >  4:335627/1‑119 (MQ=255)                                                                                                                                            cTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCGCCCGACCGTGAc                                      <  3:335627/119‑1 (MQ=255)                                                                                                                                              gaagaaAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCGCCCGACCGTGACCTACGGCTTCAGCGAAGAGGCCGACATCcgcg      >  7:22770/1‑149 (MQ=255)                                                                                                                                                 gaaAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCGCCCGACCGTGACCTACGGCTTCAGCGAAGAGGCCGACATCCGCGCCa   >  3:312518/1‑149 (MQ=255)                                                                                                                                                  aaaaCCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCGCCCGACCGTGACCTACGGCTTCAGCGAAGAGGCCGACATCCGCGCCAt  <  6:322333/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                   GCAGCTGGGCACCAGCCGCTACCTGATCGCTGAAGCAGACGAAAGCGATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCGCCCGACCGTGACCTACGGCTTCAGCGAAGAGGCCGACATCCGCGCCAT  >  NC_002947/1524848‑1525141

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.