New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2135715 =	60 (0.970)	3 (0.050)	3/250	NT	5.0%	coding (1036/2448 nt)	fadE	medium‑long chain acyl‑CoA dehydrogenase
	?	NC_002947	2135757 =	57 (0.980)					coding (994/2448 nt)	fadE	medium‑long chain acyl‑CoA dehydrogenase

AGTGAGATGGAGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGTTCGCCCAACAGATGGTCGGGGTCGTAGGCTTTGAAGGCCAGGCCCAGCAGGGTGGCGACCGGGCCGAGGGTGAT  >  NC_002947/2135609‑2135904                                                                                                                                                       |                                                                                                                                                      aGTGAGATGGAGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAg                                                                                                                                                       >  5:354580/1‑149 (MQ=255)  gTGAGATGGAGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCCGCAgg                                                                                                                                                      >  8:51474/1‑149 (MQ=255)   tGAGATGGAGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGt                                                                                                                                                     >  5:350418/1‑149 (MQ=255)   tGAGATGGAGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGt                                                                                                                                                     >  5:343428/1‑149 (MQ=255)     agaTGGAGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTgg                                                                                                                                                   >  6:48873/1‑149 (MQ=255)          gAGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGttt                                                                                                                                              <  7:283715/149‑1 (MQ=255)           aGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTg                                                                                                                                             >  8:237100/1‑149 (MQ=255)             cGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGc                                                                                                                                            <  8:325390/148‑1 (MQ=255)                 ccACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGAtc                                                                                                                                       >  4:116837/1‑149 (MQ=255)                  cACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGAtct                                                                                                                                      >  6:300251/1‑149 (MQ=255)                   aCCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGAtctc                                                                                                                                     <  5:160234/149‑1 (MQ=255)                   aCCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGAtctc                                                                                                                                     <  7:51474/149‑1 (MQ=255)                    ccGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCg                                                                                                                                    <  3:116837/149‑1 (MQ=255)                     cGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGa                                                                                                                                   <  7:237100/149‑1 (MQ=255)                     cGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGa                                                                                                                                   >  2:324839/1‑149 (MQ=255)                       aCAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTg                                                                                                                                             <  3:191933/137‑1 (MQ=255)                       aCAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTg                                                                                                                                             >  4:191933/1‑137 (MQ=255)                       aCAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACg                                                                                                                                 >  1:342946/1‑149 (MQ=255)                         aGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGcc                                                                                                                               >  8:75483/1‑149 (MQ=255)                           gCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCgg                                                                                                                             <  4:71501/149‑1 (MQ=255)                             aGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑c                                                                                                                          <  3:296910/149‑1 (MQ=255)                                  atcaACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGATGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTCGCGTTTGCCGATCTCGACGCCGGG‑CGTGTc                                                                                                                     >  7:271652/1‑149 (MQ=255)                                   tcaACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCg                                                                                                                    >  6:52261/1‑149 (MQ=255)                                     gaggagctcggcatcagcctggccctgatccccaccgacacgcccggcgtcgagatcggcaaacgccaccTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTg                                                                                                                                                    >  2:178677‑M1/71‑116 (MQ=255)                                     gaggagctcggcatcagcctggccctgatccccaccgacacgcccggcgtcgagatcggcaaacgccaccTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTg                                                                                                                                                    <  1:178677‑M1/46‑1 (MQ=255)                                     aaCATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCgg                                                                                                                             >  1:68340/1‑139 (MQ=255)                                     aaCATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCgg                                                                                                                             <  2:68340/139‑1 (MQ=255)                                       catcatCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTgg                                                                                                                >  8:265748/1‑149 (MQ=255)                                         tcatcCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCACGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTgggg                                                                                                              <  7:317216/149‑1 (MQ=255)                                            tcCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGAt                                                                                                            >  6:291345/1‑148 (MQ=255)                                              cAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑g                                                                                                        >  8:155102/1‑149 (MQ=255)                                                  ccTTGCCGAGCATGGCCTGGCCAACGATAAGGAAGTACAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGc                                                                                                     >  7:242528/1‑148 (MQ=255)                                                      gCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAgg                                                                                                 <  5:48873/148‑1 (MQ=255)                                                                gcctggccACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGa                                                                                       <  8:271652/148‑1 (MQ=255)                                                                     gccACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGctcct                                                                                 >  2:35130/1‑149 (MQ=255)                                                                        aCCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTcctcct                                                                              >  6:168399/1‑149 (MQ=255)                                                                         ccGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTg                                                                             >  7:137047/1‑149 (MQ=255)                                                                          cGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCa                                                                                                          >  4:250355/1‑120 (MQ=255)                                                                          cGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCa                                                                                                          <  3:250355/120‑1 (MQ=255)                                                                            aTCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGTTc                                                                          <  6:350418/149‑1 (MQ=255)                                                                               acgAAGGCCACCGGTACGAACACGGCCTTGGCGCCGTTGGGGCCCTTCAAGAATGCC‑‑GCGCCCAGCGGCATGTGGCGTTTTCCGATCGCCACGCCGGGCCGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGTTCGc                                                                        <  1:91225/147‑1 (MQ=255)                                                                                    gTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGTTCGCCCAACa                                                                  <  6:343428/149‑1 (MQ=255)                                                                                       cAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGTTCGCCCAACAGa                                                                <  7:265748/148‑1 (MQ=255)                                                                                       cAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGTTCGCCCAACAGAt                                                               >  6:82381/1‑149 (MQ=255)                                                                                       cAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGTTCGCCCAACAGAt                                                               >  4:217751/1‑149 (MQ=255)                                                                                            gTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGTTCGCCCAACAGATGGTCg                                                          <  2:342946/149‑1 (MQ=255)                                                                                            gTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGTTCGCCCAACAGATGGTCg                                                          <  5:52261/149‑1 (MQ=255)                                                                                               cGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGTTCGCCCAACAGATGGTCgggg                                                       <  2:102018/149‑1 (MQ=255)                                                                                                 aaCACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGTTCGCCCAACAGATGGTCGGGGTc                                                     >  8:22377/1‑149 (MQ=255)                                                                                                  acacGTCTTTGGCGCTGTTGGGGCCGGTCATGAAGGCGTATGGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGTTCGCCCAACAGATGGTCGGGGt                                                      <  1:324839/149‑1 (MQ=255)                                                                                                      gTCTTTGCCGCTGTAGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTAAGCCGAGCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGATCGCACAACAGATGGTCGGGGTCGTAgg                                                >  8:78645/1‑149 (MQ=255)                                                                                                         cacctgccgctgggcgccgccttcatgaacggccccaacagcggcaGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGctcctc                                                                                >  2:178677‑M2/47‑116 (MQ=255)                                                                                                         cacctgccgctgggcgccgccttcatgaacggccccaacagcggcaGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGctcctc                                                                                <  1:178677‑M2/70‑1 (MQ=255)                                                                                                           TGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGTTCGCCCAACAGATGGTCGGGGTCGTAGGCttt                                            >  5:168399‑M1/1‑148 (MQ=255)                                                                                                            GCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGTTCGCCCAACAGATGGTCGGGGTCGTAGGCTTTg                                           <  6:74807‑M1/148‑1 (MQ=255)                                                                                                            GCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGTTCGCCCAACAGATGGTCGGGGTCGTAGGCTTTg                                           >  7:22377‑M1/1‑148 (MQ=255)                                                                                                             CCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGTTCGCCCAACAGATGGTCGGGGTCGTAGGCTTTGaa                                         >  5:291345‑M1/1‑149 (MQ=255)                                                                                                               ccgctgggcgccgccttcatgaacggccccaacagcggcaGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGTTCGCCCAACAGATGGTCGGGGTCGTAGGCTTTGaa                                         <  3:108280‑M2/109‑1 (MQ=255)                                                                                                                   ttGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGTTCGCCCAACAGATGGTCGGGGTCGTAGGCTTTGAaggccag                                   >  5:279141/1‑149 (MQ=255)                                                                                                                        gCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGTTCGCCCAACAGATGGTCGGGGTCGTAGGCTTTGAaggccaggcc                                >  5:250008/1‑147 (MQ=255)                                                                                                                               aTGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTCTTCGCCCAACAGATGGTCGGGGTCGTAGGCTTTGAAGGCCAGGCCCAGCAGGGt                       >  1:178158/1‑149 (MQ=255)                                                                                                                                tGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGTTCGCCCAACAGATGGTCGTGGTCGTAGGCTTTGAAGGCCAGGCCCAGCAGGGTg                      <  8:45840/149‑1 (MQ=255)                                                                                                                                tGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGTTCGCCCAACAGATGGTCGGGGTCGTAGGCTTTGAAGGCCAGGCCCAGCAGGGTg                      >  2:276462/1‑149 (MQ=255)                                                                                                                                tGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGTTCGCCCAACAGATGGTCGGGGTCGTAGGCTTTGAAGGCCAGGCCCAGCAGGGTg                      <  5:300251/149‑1 (MQ=255)                                                                                                                                  aaGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGTTCGCCCAACAGATGGTCGGGGTCGTAGGCTTTGAAGGCCAGGCCCAGCAGGGTgg                     <  6:354580/148‑1 (MQ=255)                                                                                                                                  aaGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCGGATGCCGAGCTCCTCCTGTTCGCCCAACAGATGGTCGGGGTCGTAGGCTTTGAAGGCCAGGCCCAGCAGGGTGGc                    <  7:75483/149‑1 (MQ=255)                                                                                                                                    ggcg‑‑gcGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGTTCGCCCAACAGATGGTCGGGGTCGTAGGCTTTGAAGGCCAGGCCCAGCAGGGTGGCGa                  >  4:371045/1‑149 (MQ=255)                                                                                                                                    ggcg‑‑gcGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGTTCGCCCAACAGATGGTCGGGGTCGTAGGCTTTGAAGGCCAGGCCCAGCAGGGTGGCGa                  >  4:65126/1‑149 (MQ=255)                                                                                                                                      cg‑‑gcgCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGAG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGTTCGCCCAACAGATGGTCGGGGTCGTAGGCTTGGAAGGCCAGGCCCAGCAGGGGGGCGccc                >  5:296702/1‑149 (MQ=255)                                                                                                                                       g‑‑gcgCCCAGCGGCAGGTGGCGTTTGCCGTTCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGTTCGCTCAACAGATGGTCGGGGTCGTAGGCTTTGAaggc                                      >  1:221211/1‑126 (MQ=255)                                                                                                                                       g‑‑gcgCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGTTCGCTCAACAGATGGTCGGGGTCGTAGGCTTTGAaggc                                      <  2:221211/126‑1 (MQ=255)                                                                                                                                          gcgcCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCATGGGCCAGGCTGATGCCGAGCTCCTCCTGTTCGCCCAACAGATGGTCGGGGTCGTAGGCTTTGAAGGCCAGGCCCAGCAGGGTGGCGACCg               >  1:112129/1‑149 (MQ=255)                                                                                                                                            gcCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGTTCGCCCAACAGATGGTCGGGGTCGTAGGCTTTGAAGGCCAGGCCCAGCAGGGTGGCGACCGGGc            <  5:82381/149‑1 (MQ=255)                                                                                                                                               cagcggcaGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGTTCGCCCAACAGATGGTCGGGGTCGTAGGCTTTGAAGGCCAGGCCCAGCAGGGTGGCGACCGGGcc           >  2:236772‑M2/9‑147 (MQ=255)                                                                                                                                               cagcggcaGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGTTCGCCCAACAGATGGTCGGGGTCGTAGGCTTTGAAGGCCAGGCCCAGCAGGGTGGCGACCGGGCCGa         <  6:250008‑M2/141‑1 (MQ=255)                                                                                                                                                    gcaGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGTTCGCCCAACAGATGGTCGGGGTCGTAGGCTTTGAAGGCCAGGCCCAGCAGGGTGGCGACCGGGCCGAGGGTg    >  2:274107‑M2/4‑149 (MQ=255)                                                                                                                                                     caGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGATGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGTTCGCCCAACAGATGGTCGGGGTCGTAGGCTTTGAAGGCCAGGCCCAGCAGGGTGGCGACCGGGCCGAGGGTGa   >  1:69279‑M2/3‑149 (MQ=255)                                                                                                                                                      aGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGTTCGCCCAACAGATGGTCGGGGTCGTAGGCTTTGAAGGCCAGGCCCAGCAGGGTGGCGACCGGGCCGAGGGTGAt  <  7:155102‑M2/148‑1 (MQ=255)                                                                                                                                                       |                                                                                                                                                      AGTGAGATGGAGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCG‑‑GCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGG‑CGTGTCGGTGGGGATCA‑GGGCCAGGCTGATGCCGAGCTCCTCCTGTTCGCCCAACAGATGGTCGGGGTCGTAGGCTTTGAAGGCCAGGCCCAGCAGGGTGGCGACCGGGCCGAGGGTGAT  >  NC_002947/2135609‑2135904

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.