New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3031549	49 (0.790)	6 (0.100)	4/256	NT	11.6%	coding (856/2763 nt)	mgtA	ATP‑dependent magnesium transporter
	?	NC_002947	= 3031578	44 (0.740)					coding (885/2763 nt)	mgtA	ATP‑dependent magnesium transporter

ATGGCGCACATCAGGACAACCTGCTCGAGTTGCCGAACATCTGCTTCATGGGGACCAATGTGGTCAGTGGCCGCGCCCGCGCCGTGGT‑GGTCGCCACCGGCCGACGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCGCTTCATGCTGGTGATGGTGCCGGTGGTGTTCATGATCAACGGTGTGGTGAAAGGCGACTGGGCTGATGCCTTCCTCTTCGCGCTTGCCGTGG  >  NC_002947/3031430‑3031723                                                                                                                                                      |                                                                                                                                                      aTGGCGCACATCAGGACAACCTGCTCGAGTTGCCGAACATCTGCTTCATGGGGACCAATGTGGTCAGTGGCCGCGCCCGCGCCGTGGT‑GGTCGCCACCGGCCGACGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCgcgc                                                                                                                                                       <  3:70536/149‑1 (MQ=255)    gcgcACATCAGGACAACCTGCTCGAGTTGCCGAACATCTGCTTCATGGGGACCAATGTGGTCAGTGGCCGCGCCCGCGCCGTGGT‑GGTCGCCACCGGCCGACGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCag                                                                                                                                                     >  4:37866‑M2/1‑146 (MQ=255)                          cGAGTTGCCGAACATCTGCTTCATGGGGACCAATGTGGTCAGTGGCCGCGCCCGCGCCGTGGT‑GGTCGCCACCGGCCGACGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCgcggcg                                                                                                                              >  1:68815/1‑149 (MQ=255)                                 ccGAACATCTGCTTCATGGGGACCAATGTGGTCAGTGGCCGCGCCCGCGCCGTGGT‑GGTCGCCACCGGCCGACGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑Ag                                                                                                                    >  3:9493/1‑149 (MQ=255)                                  cGAACATCTGCTTCATGGGGACCAATGTGGTCAGTGGCCGCGCCCGCGCCGTGGT‑GGTCGCCACCGGCCGACGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGc                                                                                                                   >  4:262487/1‑149 (MQ=255)                                   gAACATCTGCTTCATGGGGACCAATGTGGTCAGTGGCCGCGCCCGCGCCGTGGT‑GGTCGCCACCGGCCGACGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCg                                                                                                                  >  6:220022/1‑149 (MQ=255)                                   gAACATCTGCTTCATGGGGACCAATGTGGTCAGTGGCCACGCACGCGCCGTGGT‑GGTCGCCACCGGCCGACGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCg                                                                                                                  >  8:220939/1‑149 (MQ=255)                                       aTCTGCTTCATGGGGACCAATGTGGTCAGTGGCCGCGCCCGCGCCGTGGT‑GGTCGCCACCGGCCGACGCACCTATTTTGGCTCGCTGGCCAAGGCCAGTGCCGGTTCGCGCAGACCGACCGCTATTGCCCGCGGCGTGAAC‑‑‑AGCGTcag                                                                                                              >  8:257776/1‑149 (MQ=255)                                          tGCTTCATGGGGACCAATGTGGTCAGTGGCCGCGCCCGCGCCGTGGT‑GGTCGCCACCGGCCGACGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTcagcag                                                                                                           >  5:321732/1‑149 (MQ=255)                                           gCTTCATGGGGACCAATGTGGTCAGTGGCCGCGCCCGCGCCGTGGT‑GGTCGCCACCGGCCGACGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCagcagc                                                                                                          >  6:36293/1‑149 (MQ=255)                                            cTTCATGGGGACCAATGTGGTCAGTGGCCGCGCCCGCGCCGTGGT‑GGTCGCCACCGGCCGACGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTcagca                                                                                                            <  2:345991/146‑1 (MQ=255)                                            cTTCATGGGGACCAATGTGGTCAGTGGCCGCGCCCGCGCCGTGGT‑GGTCGCCACCGGCCGACGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCagcagc                                                                                                          <  5:36293/148‑1 (MQ=255)                                                       ccAATGTGGTCAGTGGCCGCGCCCGCGCCGTGGT‑GGTCGCCACCGGCCGACGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCGc                                                                                             <  3:372811/149‑1 (MQ=255)                                                        cAATGTGGTCAGTGGCCGCGCCCGCGCCGTGGTGGGTCGCCACCGGCCGACGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCGc                                                                                             >  1:58159/1‑149 (MQ=255)                                                        cAATGTGGTCAGTGGCCGCGCCCGCGCCGTGGT‑GGTCGCCACCGGCCGACGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCGCt                                                                                            >  8:246415/1‑149 (MQ=255)                                                          aTGTGGTCAGTGGCCGCGCCCGCGCCGTGGT‑GGTCGCCACCGGCCGACGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCGCTTc                                                                                          <  2:68815/149‑1 (MQ=255)                                                                tCAGTGGCCGCGCCCGCGCCGTGGT‑GGTCGCCACCGGCCGACGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCGCTTCATGCTg                                                                                    >  2:203918/1‑149 (MQ=255)                                                                tCAGTGGCCGCGCCCGCGCCGTGGT‑GGTCGCCACCGGCCGACGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGAGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCGCTTCATGCTg                                                                                    >  6:228038/1‑149 (MQ=255)                                                                 cAGTGGCCGCGCCCGCGCCGTGGT‑GGGCGCCACCGGCCGACGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCGCTTCATGCTgg                                                                                   <  7:257776/149‑1 (MQ=255)                                                                   gTGGCCGCGCCCGCGCCGTGGT‑GGTCGCCACCGGCCGACGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCACTTCATGCTGGt                                                                                  >  5:242753/1‑148 (MQ=255)                                                                    tGGCCGCGCCCGCGCCGTGGT‑GGTCGCCACCGGCCGACGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCGCTTCATGCTGGTGa                                                                                >  7:28883/1‑149 (MQ=255)                                                                      gCCGCGCCCGCGCCGTGGT‑GGTCGCCACCGGCCGACGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCGCTTCATGCTGGTGATg                                                                              <  7:246415/149‑1 (MQ=255)                                                                      gCCGCGCCCGCGCCGTGGT‑GGTCGCCACCGGCCGACGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCGCTTCATGCTGGTGATg                                                                              <  2:145221/149‑1 (MQ=255)                                                                               gcgccGTGGT‑GGTCGCCACCGGCCGACGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCGCTTCATGCTGGTGATGGTGCCggtg                                                                     <  5:220022/149‑1 (MQ=255)                                                                               gcgccGTGGT‑GGTCGCCACCGGCCGACGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCGCTTCATGCTGGTGATGGTGCCggtg                                                                     <  8:28883/149‑1 (MQ=255)                                                                                 gccGTGGT‑GGTCGCCACCGGCCGACGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCGCTTCATGCTGGTGATg                                                                              <  2:147875/138‑1 (MQ=255)                                                                                 gccGTGGT‑GGTCGCCACCGGCCGACGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCGCTTCATGCTGGTGATg                                                                              >  1:147875/1‑138 (MQ=255)                                                                                           gtCGCCACCGGCCGACGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCGCTTCATGCTGGTGATGGTGCCGGTGGTGTTCATGAt                                                          >  4:189081/1‑149 (MQ=255)                                                                                            tCGCCACCGGCCGACGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCGCTTCATGCTGGTGATGGTGCCGGTGGTGTTCATGAt                                                          >  7:7307/1‑148 (MQ=255)                                                                                                   cGGCCGACGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCGCTTCATGCTGGTGATGGTGCCGGTGGTGTTCATGATCAACGgtg                                                  >  8:252239/1‑149 (MQ=255)                                                                                                     gCCGACGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCGCTTCATGCTGGTGATGGTGCCGGTGGTGTTCATGATCAACGGtgtg                                                <  1:203918/149‑1 (MQ=255)                                                                                                     gCCGACGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCGCTTCATGCTGGTGATGGTGCCGGTGGTGTTCATGAACAACGGtgtg                                                <  4:9493/149‑1 (MQ=255)                                                                                                     gCCGACGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCACTTCATGCTGGTGATGGTGCCGGTGGTGTTCATGATCAACGGtgtg                                                <  6:242753/149‑1 (MQ=255)                                                                                                          cGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCGCTTCATGCTGGTGATGGTGCCGGTGGTGTTCATGATCAACGgtg                                                  <  1:318923/142‑1 (MQ=255)                                                                                                          cGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCGCTTCATGCTGGTGATGGTGCCGGTGGTGTTCATGATCAACGgtg                                                  >  2:318923/1‑142 (MQ=255)                                                                                                             aCCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGAACGTGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCGCTTCATGCTGGTGATTGTGCCGGTGGTGTTCATGATCAACGGTGTGGTGAAAgg                                        <  7:220939/149‑1 (MQ=255)                                                                                                              ccTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCGCTTCATGCTGGTGATGGTGCCGGTGGTGTTCATGATCAACGGTGTGGTGAAAGGc                                       <  2:58159/149‑1 (MQ=255)                                                                                                               cTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCagccaaaataggtgcgtcggccggtggcgaccaccacggcgcgggcgcggccactgaccacattggtccccatgaagcagatgttcggcaactcgagcaggttgtcct                                           <  7:184847‑M2/148‑109 (MQ=255)                                                                                                               cTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCagccaaaataggtgcgtcggccggtggcgaccaccacggcgcgggcgcggccactgaccacattggtccccatgaagcagatgttcggcaactcgagcaggttgtcct                                           <  1:93484‑M2/148‑109 (MQ=255)                                                                                                               cTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAACGCGAGCGTCAGCAGCCTGCGAGAACCCATAAATGATGGTTATGGTGCCGGTGGTGTTCATGATCAACGGTTTGGTGa                                            >  1:121585/1‑147 (MQ=255)                                                                                                                tATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCagccaaaataggtgcgtcggccggtggcgaccaccacggcgcgggcgcggccactgaccacattggtccccatgaagcagatgttcggcaactcgagcaggttgtcctga                                         <  2:306194‑M2/149‑111 (MQ=255)                                                                                                                tATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCagccaaaataggtgcgtcggccggtggcgaccaccacggcgcgggcgcggccactgaccacattggtccccatgaagcagatgttcggcaactcgagcaggttgtcctga                                         <  7:88040‑M2/149‑111 (MQ=255)                                                                                                                tATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCGCTTCATGCTGGTGATGGTGCCGGTGGTGTTCATGATCAACGGTGTGGTGAAAGGCGa                                     >  3:319542/1‑149 (MQ=255)                                                                                                                      ggCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCagccaaaataggtgcgtcggaccggtggcgaccaccacggcgcgggcgcggccactgaccacattggtccccatgaagcagatgttcggcaactcgagcaggttgtcctgatgtgc                                   <  1:295357‑M2/149‑117 (MQ=255)                                                                                                                           gCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCGCTTCATGCTGGTGATGGTGCCGGTGGTGTTCATGATCAACGGTGTGGTGAAAGGCGACTGGGCTGAt                           <  3:189081/148‑1 (MQ=255)                                                                                                                           gCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCGCTTCATGCTGGTGATGGTGCCGGTGGTGTTCATGATCAACGGTGTGGTGAAAGGCGACTGGGCTGATg                          >  5:9417/1‑149 (MQ=255)                                                                                                                             tGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCGCTTAATGCTGGTGATGGTGCCGGTGGTGTTCATGATCAACGGTGTGGTGAAAGGCGACTGGGCTGATGcc                        >  7:50238/1‑149 (MQ=255)                                                                                                                                ccAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCGCTTCATGCTGGTGATGGTGCCGGTGGTGTTCATGATCAACGGTGTGGTGAAAGGCGACTGGGCTGATGCCTTc                     <  6:134194/149‑1 (MQ=255)                                                                                                                                     gCCATTGCCGGTTCGCGCagccaaaataggtgcgtcggccggtggcgaccaccacggcgcgggcgcggccactgaccacattggtccccatgaagcagatgttcggcaactcgagcaggttgtcctgatgtgcgccatgctcggcggcg                    >  8:88040‑M2/1‑18 (MQ=255)                                                                                                                                       cATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCGCTTCATGCTGGTGATGGTGCCGGTGGTGTTCATGATCAACGGTGTGGTGAAAGGCGACTGGGCTGATGCCTTCCTCTTcg              >  1:325088/1‑149 (MQ=255)                                                                                                                                            ccGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCGCTTCATGCTGGTGATGGTGCCGGTGGTGTTCATGATCAACGGTGTGGTGAAAGGGGACTGGGCTGATGCCTTCCTCTTCGCGCtt         <  1:31372/149‑1 (MQ=255)                                                                                                                                               gTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCGCTTCATGCTGGTGATGGTGCCGGTGGTGTTCATGATCAACGGTGTGGTGAAAGGCGACTGGGCTGATGCCTTCCTCTTCGCGCTTGcc      >  5:24044/1‑149 (MQ=255)                                                                                                                                                   gcgcAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCGCTTCATGCTGGTGATGGTGCCGGTGGTGTTCATGATCAACGGTGTGGTGAAAGGCGACTGGGCTGATGCCTTCCTCTTCGCGCTTGCCGTgg  <  7:252239/149‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                      ATGGCGCACATCAGGACAACCTGCTCGAGTTGCCGAACATCTGCTTCATGGGGACCAATGTGGTCAGTGGCCGCGCCCGCGCCGTGGT‑GGTCGCCACCGGCCGACGCACCTATTTTGGCTCGCTGGCCAAGGCCATTGCCGGTTCGCGCAGCCAGACCGCTTTTGACCGCGGCGTGAAC‑‑‑AGCGTCAGCAGCCTGC‑TGATCCGCTTCATGCTGGTGATGGTGCCGGTGGTGTTCATGATCAACGGTGTGGTGAAAGGCGACTGGGCTGATGCCTTCCTCTTCGCGCTTGCCGTGG  >  NC_002947/3031430‑3031723

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.