New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3065532	35 (0.560)	3 (0.050)	3/256	NT	8.6%	coding (472/768 nt)	PP_2677	hypothetical protein
	?	NC_002947	= 3065563	30 (0.500)					coding (503/768 nt)	PP_2677	hypothetical protein

GCCACACCGCTGCGCGCCGCTGTACTGACGCGCGATGGCCTGTGGCACGTCGGTTCGACCCTGATCGATGCGGCCGGCGGCGGTTGTACCGCACCCAGCGTGGTGCGCACCCAGCCCGGCTGGGAGGAGCACCTCGGGGAGGTGCTGGGCGGGCGCTACCCGCGTGGCGACAGCAGCCGCCTGCGCCTGCAGGTGGCCCACCCCATGGATAACGGCCTGGTCAGCGGCATTCCTGAGTTCTTTCTCAACCATGCCGAGTTACAAGGTGCAGATGGCCAGCGCCTGGCCAGCCTGGAG  >  NC_002947/3065415‑3065711                                                                                                                                                     |                                                                                                                                                     gCCACACCGCTGCGCGCCGCTGTACTGACGCGCGATGGCCTGTGGCACGTCGGTTCGACCCTGATCGATGCGGCCGGCGGCGGTTGTACCGCACCCAGCGTGGTGCGCACCCAGCCCGGCTGGGAGGAGCACCTCGGGGAGGTGCTggg                                                                                                                                                      >  8:32184/1‑149 (MQ=255)   cacaCCGCAGCGCGACGCTTTACTCACGCGCGATGGCCAGTGGCACGTCGGTTCGACCCTCAACGCTCCGGCCGGCGGCGGATGTACCGCACCAAGCGAGGTCCGCACCCAGACCTGCTGGGAGCAGCACCTCGGCGAGGTGCTgggcg                                                                                                                                                    >  4:273343/1‑149 (MQ=255)     cacCGCTGCGCGCCGCTGTACTGACGCGCGATGGCCTGTGGCACGTCGGTTCGACCCTGATCGATGCGGCCGGCGGCGGTTGTACCGCACCCAGCGTGGTGCGCACCCAGCCCGGCTGGGAGGAGCACCTCGGGGAGGTGCTGGGcggg                                                                                                                                                  >  2:111928‑M2/1‑145 (MQ=255)        cGCTGCGCGCCGCTGTACTGACGCGCGATGGCCTGTGGCACGTCGGTTCGACCCTGATCGATGCGGCCGGCGGCGGTTGTACCGCACCCAGCGTGGTGCGCACCCAGCCCGGCTGGGAGGAGCACCTCGGGGAGGTGCTGGGCGGgcgc                                                                                                                                               >  8:285379/1‑149 (MQ=255)                gccgcTGTACTGACGCGCGATGGCCTGTTGCACGTCGGTTCGACCCTGATAGATGCGGCCGGCGGCGGTTGTACCGCACCAAGCGTGGTGCGCACCCAGCCCGGCAGGGAGGAGAACCTAGTGGAGGTGCTgggcgggc                                                                                                                                                 >  4:321488/1‑139 (MQ=255)                 ccgcTGTACTGACGCGCGATGGCCTGTGGCACGTCGGTTCGACCCTGATCGATGCGGCCGGCGGCGGTTGTACCGCACCCAGCGTGGTGCGCACCCAGCCCGGCTGGGAGGAGCACCTCGGGGAGGTGCTGGGCGGGCGCTACCCGCGt                                                                                                                                      <  6:34918/149‑1 (MQ=255)                         cTGACGCGCGATGGCCTGTGGCACGTCGGTTCGACCCTGATCGATGCGGCCGGCGGCGGTTGTACCGCACCCAGCGTGGTGCGCACCCAGCCCGGCTGGGAGGAGCACCTCGGGGAGGTGCTGGGCGGGCGCTACCCGCGTGGCGAcag                                                                                                                              >  5:29630/1‑149 (MQ=255)                                            ggCACGTCGGTTCGACCCTGATCGATGCGGCCGGCGGCGGTTGTACCGCACCCAGCGTGGTGCGCACCCAGCCCGGCTGGGAGGAGCACCTCGGGGAGGTGCTGGGCGGGCGCTACCCGCGTGGCGACAGCAGCCGCCTGCGCCTGCAg                                                                                                           <  3:273343/149‑1 (MQ=255)                                                cGTCGGTTCGACCCTGATCGATGCGGCCGGCGGCGGTTGTACCGCACCCAGCGTGGTGCGCACCCAGCCCGGCTGGGAGGAGCACCTCGGGGAGGTGCTGGGCGGGCGCTACCCGCGTGGCGACAGCAGCCGCCTGCGCCTGCAGGTgg                                                                                                       <  5:370676/149‑1 (MQ=255)                                                      ttCGACCCTGATCGATGCGGCCGGCGGCGGTTGTACCGCACCCAGCGTGGTGCGCACCCAGCCCGGCTGGGAGGAGCACCTCGGGGAGGTGCTGGGCGGGCGCTACCCGCGTGGCGACAGCAGCCGCCTGCGCCTGCAGGTGGCCCAcc                                                                                                 <  3:46104/149‑1 (MQ=255)                                                          aCCCTGATCGATGCGGCCGGCGGCGGTTGTACCGCACCCAGCGTGGTGCGCACCCAGCCCGGCTGGGAGGAGCACCTCGGGGAGGTGCTGGGCGGGCGCTACCCGCGTGGCGACAGCAGCCGCCTGCGCCTGCAGCTGGCCCACCCCAt                                                                                             >  7:163853/1‑149 (MQ=255)                                                           cccTGATCGATGCGGCCGGCGGCGGTTGTACCGCACCCAGCGTGGTGCGCACCCAGCCCGGCTGGGAGGAGCACCTCGGGGAGGTGCTGGGCGGGCGCTACCCGCGTGGCGACAGCAGCCGCCTGCGCCTGCAGGTGGCCCACCCCATg                                                                                            <  6:29630/149‑1 (MQ=255)                                                               gATCGATGCGGCCGGCGGCGGTTGTACCGCACCCAGCGTGGTGCGCACCCAGCCCGGCTGGGAGGAGCACCTCGGGGAGGTGCTGGGCGGGCGCTACCCGCGTGGCGACAGCAGCCGCCTGCGCCTGCAGGTGGCCCACCCCATGGAt                                                                                         >  1:197113/1‑148 (MQ=255)                                                               gATCGATGCGGCCGGCGGCGGTTGTACCGCACCCAGCGTGGTGCGCACCCAGCCCGGCTGGGAGGAGCACCTCGGGGAGGTGCTGGGCGGGCGCTACCCGCGTGGCGACAGCAGCCGCCTGCGCCTGCAGGTGGCCCACCCCATGGAt                                                                                         >  6:136648/1‑148 (MQ=255)                                                                aTCGATGCGGCCGGCGGCGGTTGTACCGCACCCAGCGTGGTGCGCACCCAGCCCGGCTGGGAGGAGCACCTCGGGGAGGTGCTGGGCGGGCGCTACCCGCGTGGCGACAGCAGCCGCCTGCGCCTGCAGGTGGCCCACCCCATgg                                                                                           <  4:115613/145‑1 (MQ=255)                                                                aTCGATGCGGCCGGCGGCGGTTGTACCGCACCCAGCGTGGTGCGCACCCAGCCCGGCTGGGAGGAGCACCTCGGGGAGGTGCTGGGCGGGCGCTACCCGCGTGGCGACAGCAGCCGCCTGCGCCTGCAGGTGGCCCACCCCATgg                                                                                           >  3:115613/1‑145 (MQ=255)                                                                       cggccggcGGCGGTTGTACCGCACCCAGCGTGGTGCGCACCCAGCCCGGCTGGGAGGAGCACCTCGGGGAGGTGCTGGGCGGGCGCTACCCGCGTGGCGACAGCAGCCGCCTGCGCCTGCAGGTGGCCCACCCCATGGATAACGGCCTg                                                                                <  5:361383/149‑1 (MQ=255)                                                                         gccggcGGCGGTTGTACCGCACCCAGCGTGGTGCGCACCCAGCCCGGCTGGGAGGAGCACCTCGGGGAGGTGCTGGGCGGGCGCTACCCGCGTGGCGACAGCAGCCGCCTGCGCCTGCAGGTGGCCCACCCCATGGATAACGGCCTGGt                                                                              >  1:374894/1‑149 (MQ=255)                                                                             gcggcggTTGTACCGCACCCAGCGTGGTGCGCACCCAGCCCGGCTGGGAGGAGCACCTCGGGGAGGTGCTGGGCGGGCGCTACCCGCGTGGCGACAGCAGCCGCCTGCGCCTGCAGGTGGCCCACCCCATGGATAACGGCCTGGTCAGc                                                                          >  2:293819/1‑149 (MQ=255)                                                                                     tGTACCGCACCCAGCGTGGTGCGCACCCAGCCCGGCTGGGAGGAGCACCTCGGGGAGGTGCTGGGCGGGCGCTACCCGCGTGGCGACAGCAGCCGCCTGCGCCTGCAGGTGGCCCACCCCATGGATAACGGCCTGGTCAGCGGCATTcc                                                                  >  5:231702/1‑149 (MQ=255)                                                                                       tACCGCACCCAGCGTGGTGCGCACCCAGCCCGGCTGGGAGGAGCACCTCGGGGAGGTGCTGGGCGGGCGCTACCCGCGTGGCGACAGCAGCCGCCTGCGCCTGCAGGTGGCCCACCCCATGGATAACGGCCTGGTCAGCGGCATTCCt                                                                 <  2:197113/148‑1 (MQ=255)                                                                                         ccGCACCCAGCGTTGTGCGCACCCAGCCCGGCTGGGAGGATCACCTCGGGGAGTGGCTGGGCGGGCGCTACCCGCGTGGCGACAGCAGCCGCCTGCGCCTGCAGGTGGCCCACCCCATGGATAACGGCCTGGTCAGCGGCATTCCTGa                                                               <  7:194630/148‑1 (MQ=255)                                                                                         ccGCACCCAGCGTGGTGCGCACCCAGCCCGGCTGGGAGGAGCACCTCGGGGAGGTGCTGGGCGGGCGCTACCCGCGTGGCGACAGCAGCCGCCTGCGCCTGCAGGTGGCCCACCCCATGGATAACGGCCTGGTCAGCGGCATTCCTGa                                                               <  2:131605/148‑1 (MQ=255)                                                                                            cACCCAGCGTGGTGCGCACCCAGCCCGGCTGGGAGGAGCACCTCGGGGAGGTGCTGGGCGGGCGCTACCCGCGTGGCGACAGCAGCCGCCTGCGCCTGCAGGTGGCCCCCCCCATGGATAACGGCCTGGTCAGCGGCATTCCTGAGttc                                                           >  3:255480/1‑149 (MQ=255)                                                                                                        tgCGCACCCAGCCCGGCTGGGAGGAGCACCTCGGGGAGGTGCTGGGCGGGCGCTACCCGCGTGGCGACAGCAGCCGCCTGCGCCTGCCGGTGGCCCACCCCATGGATAACGGCCTGGTCAGCGGCATTCCTGAGTTCTTTCTCCACCAt                                               >  4:52406/1‑149 (MQ=255)                                                                                                               ccAGCCCGGCTGGGAGGAGCACCTCGGGGAGGTGCTGGGcgggctgggtgcgcaccacgctgggtgcggtacaaccgccgccggccgcatcgatcagggtcgaaccgacgtgccacaggccatcgcgcgtcagtacagcggcgcgcagc                                        <  2:93002‑M2/149‑111 (MQ=255)                                                                                                               ccAGCCCGGCTGGGAGGAGCACCTCGGGGAGGTGCTGGGCGGGCGCTACCCGCGTGGCGACAGCAGCCGCCTGCGCCTGCAGGTGGCCCACCCCATGGATAACGGCCTGGTCAGCGGCATTCCTGAGttct                                                          >  2:366067/1‑131 (MQ=255)                                                                                                               ccAGCCCGGCTGGGAGGAGCACCTCGGGGAGGTGCTGGGCGGGCGCTACCCGCGTGGCGACAGCAGCCGCCTGCGCCTGCAGGTGGCCCACCCCATGGATAACGGCCTGGTCAGCGGCATTCCTGAGTTCTTTCTCAACCATGCCGAGt                                        <  3:289763/149‑1 (MQ=255)                                                                                                               ccAGCCCGGCTGGGAGGAGCACCTCGGGGAGGTGCTGGGCGGGCGCTACCCGCGTGGCGACAGCAGCCGCCTGCGCCTGCAGGTGGCCCACCCCATGGATAACGGCCTGGTCAGCGGCATTCCTGAGTTCTTTCTCAACCATGCCGAGt                                        >  6:258159/1‑149 (MQ=255)                                                                                                                cAGCCCGGCTGGGAGGAGCACCTCGGGGAGGTGCTGGGcgggctgggtgcgcaccacgctgggtgcggtacaaccgccgccggccgcatcgatcagggtcgaaccgacgtgccacaggccatcgcgcgtcagtacagcggcgcgcagcg                                       <  6:228260‑M2/149‑112 (MQ=255)                                                                                                                      ggCTGGGAGGAGCACCTCGGGGAGGTGCTGGGcgggctgggtgcgcaccacgctgggtgcggtacaaccgccgccggccgcatcgatcagggtcgaaccgacgtgccacaggccatcgcgcgtcagtacagcggcgcgcagcggtgtgg                                 >  5:228260‑M2/1‑32 (MQ=255)                                                                                                                                  cACCTCGGGGAGGTGCTGGGCGGGCGCTACCCGCGTGGCGACAGCAGCCGCCTGCGCCTGCAGGTGGCCCACCCCATGGATAACGGCCTGGTCAGCGGCATTCCTGAGTTCTTTCTCAACCATGCCGAGTTACAAGGTGCAGATGGCCa                     <  7:285379/149‑1 (MQ=255)                                                                                                                                    ccTCGGGGAGGTGCTGGGCGGGCGCTACCCGCGTGGCGACAGCAGCCGCCTGCGCCTGCAGGTGGCCCACCCCATGGATAACGGCCTGGTCAGCGGCATTCCTGAGTTCTTTCTCAACCATGCCGAGTTACAAGGTGCAGATGGCCAgc                   >  5:286747/1‑149 (MQ=255)                                                                                                                                    ccTCGGGGAGGTGCTGGGCGGGCGCTACCCGCGTGGCGACAGCAGCCGCCTGCGCCTGCAGGTGGCCCACCCCATGGATAACGGCCTGGTCAGCGGCATTCCTGAGTTATTTCTCAACCATGCCGAGTTACAAGGTGCAGATGGCCAgc                   >  6:94011/1‑149 (MQ=255)                                                                                                                                      tCGGGGAGGTGCTGGGCGGGCGCTACCCGCGTGGCGACAGCAGCCGCCTGCGCCTGCAGGTGGCCCACCCCATGGATAACGGCCTGGTCAGCGGCATTCCTGAGTTCTTTCTCAACCATGCCGAGTTACAAGGTGCAGATGGCCAgcgc                 >  1:181555/1‑149 (MQ=255)                                                                                                                                              gTGCTGGGCGGGCGCTACCCGCGTGGCGACAGCAGCCGCCTGCGCCTGCAGGTGGCCCACCCCATGGATAACGGCCTGGTCAGCGGCATTCCTGAGTTCTTTCTCAACCATGCCGAGTTACAAGGTGCAGATGGCCAGGCGCTGGCCat         <  5:258159/149‑2 (MQ=255)                                                                                                                                               tGCTGGGCGGGCGCTACCCGCGTGGCGACAGCAGCCGCCTGCGCCTGCAGGTGGCCCACCCCATGGATAACGGCCTGGTCAGCGGCATTCCTGAGTTCTTTCTCAACCATGCCGAGTTACAAGGTGCAGATGGCCAGCGCCTGGCCAGc        <  5:136648/149‑1 (MQ=255)                                                                                                                                               tGCTGGGCGGGCGCTACCCGCGTGGCGACAGCAGCCGCCTGCGCCTGCAGGTGGCCCACCCCATGGATAACGGCCTGGTCAGCGGCATTCCTGAGTTCTTTCTCAACCATGCCGAGTTACAAGGTGCAGATGGCCAGCGCCTGGCCAGc        <  8:163853/149‑1 (MQ=255)                                                                                                                                                     gcgggcgCTACCCGCGTGGCGACAGCAGCCGCCTGCGCCTGCAGGTGGCCCACCCCATGGATAACGGCCTGGTCAGCGGCATTCCTGAGTTCTTTCTCAACCATGCCGAGTTACAAGGTGCAGATGGCCAGCGCCTGGCCAGCCTGGAg  <  2:374894/149‑1 (MQ=255)                                                                                                                                                     gcgggcgCTACCCGCGTGGCGACAGCAGCCGCCTGCGCCTGCAGGTGGCCCACCCCATGGATAACGGCCTGGTCAGCGGCATTCCTGAGTTCTTTCTCAACCATGCCGAGTTACAAGGTGCAGATGGCCAGCGCCTGGCCAGCCTGGAg  <  1:293819/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     GCCACACCGCTGCGCGCCGCTGTACTGACGCGCGATGGCCTGTGGCACGTCGGTTCGACCCTGATCGATGCGGCCGGCGGCGGTTGTACCGCACCCAGCGTGGTGCGCACCCAGCCCGGCTGGGAGGAGCACCTCGGGGAGGTGCTGGGCGGGCGCTACCCGCGTGGCGACAGCAGCCGCCTGCGCCTGCAGGTGGCCCACCCCATGGATAACGGCCTGGTCAGCGGCATTCCTGAGTTCTTTCTCAACCATGCCGAGTTACAAGGTGCAGATGGCCAGCGCCTGGCCAGCCTGGAG  >  NC_002947/3065415‑3065711

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.