New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 343494044 (0.710)3 (0.050) 3/250 NT 6.2% coding (175/327 nt) gpW baseplate protein
?NC_002947 = 3434978 50 (0.860)coding (213/327 nt) gpW baseplate protein

TCGAAGACATCTTGACCACGCCACTCGGCAGTCGCCGCATGCGGCCGGAATACGGCAGCAAGCTGCGGCGTTACGTCGACATGCCGGTCAACGAGGGGTGGAAAAGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCATGACGTTGACCGGCGAGTACCTGGGCAGCGCTGCCGTCATGGAGGTAACCGCATGATCGACCTTTCCCTGCTGCCTCCGCCCGACGTGGT  >  NC_002947/3434830‑3435126
                                                                                                                                                    |                                                                                                                                                    
tCGAAGACATCTTGACCACGCCACTCGGCAGTCGCCGCATGCGGCCGGAATACGGCAGCAAGCTGCGGCGTTACGTCGACATGCCGGTCAACGAGGGGTGGAAAAGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAg                                                                                                                                                      >  2:233464/1‑149 (MQ=255)
  gAAGACATCTTGACCACGCCACTCGGCAGTCGCCGCATGCGGCCGGAATACGGCAGCAAGCTGCGGCGTTACGTCGACATGCCGGTCAACGAGGGGTGGAAAAGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGcc                                                                                                                                                    >  3:278658‑M2/1‑147 (MQ=255)
             gACCACGCCACTCGGCAGTCGCCGCATGCGGCCGGAATACGGCAGCAAGCTGCGGCGTTACGTCGACATGCCGGTCAACGAGGGGTGGAAAAGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGc                                                                                                                                            <  2:381536/146‑1 (MQ=255)
              aCCACGCCACTCGGCAGTCGCCGCATGCGGCCGGAATACGGCAGCAAGCTGCGGCGTTACGTCGACATGCCGGTCAACGAGGGGTGGAAAAGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCt                                                                                                                                        <  3:102228/149‑1 (MQ=255)
                cACGCCACTCGGCAGTCGCCGCATGCGGCCGGAATACGGCAGCAAGCTGCGGCGTTACGTCGACATGCCGGTCAACGAGGGGTGGAAAAGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTgg                                                                                                                                      >  8:278777/1‑149 (MQ=255)
                cACGCCACTCGGCAGTCGCCGCATGCGGCCGGAATACGGCAGCAAGCTGCGGCGTTACGTCGACATGCCGGTCAACGAGGGGTGGAAAAGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTg                                                                                                                                       >  2:265444/1‑148 (MQ=255)
                   gCCACTCGGCAGTCGCCGCATGCGGCCGGAATACGGCAGCAAGCTGCGGCGTTACGTCGACATGCCGGTCAACGAGGGGTGGAAAAGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGc                                                                                                                                   >  7:183358/1‑149 (MQ=255)
                       cTCGGCAGTCGCCGCATGCGGCCGGAATACGGCAGCAAGCTGCGGCGTTACGTCGACATGCCGGTCAACGAGGGGTGGAAAAGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGggt                                                                                                                               <  3:90660/149‑1 (MQ=255)
                          ggCAGTCGCCGCATGCGGCCGGACTACGGCAGCAAGCTGCGGCGTTACGGCGACATGCCGGTCAACGAGGGGTGGAACAGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGggtg                                                                                                                              <  7:75573/147‑1 (MQ=255)
                           gCAGTCGCCGCATGCGGCCGGAATACGGCAGCAAGCTGCGGCGTTACGTCGACATGCCGGTCAACGAGGGGTGGAAAAGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGggtggtg                                                                                                                           <  7:275225/149‑1 (MQ=255)
                                  ccgcATGCGGCCGGAATACGGCAGCAAGCTGCGGCGTTACGTCGACATGCCGGTCAACGAGGGGTGGAAAAGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCt                                                                                                                    <  7:329328/149‑1 (MQ=255)
                                                 aTACGGCAGCAAGCTGCGGCGTTACGTCGACATGCCGGTCAACGAGGGGTGGAAAAGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGc                                                                                                     <  8:183358/149‑1 (MQ=255)
                                                  tACGGCAGCAAGCTGCGGCGTTACGTCGACATGCCGGTCAACGAGGGGTGGAAAAGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCa                                                                                                    <  8:188387/149‑1 (MQ=255)
                                                     ggCAGCAAGCTGCGGCGTTACGTCGACATGCCGGTCAACGAGGGGTGGAAAAGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACggg                                                                                                      >  3:376265/1‑144 (MQ=255)
                                                     ggCAGCAAGCTGCGGCGTTACGTCGACATGCCGGTCAACGAGGGGTGGAAAAGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACggg                                                                                                      >  4:251537/1‑144 (MQ=255)
                                                       cagcaAGCTGCGGCGTTACGTCGACATGCCGGTCAACGAGGGGTGGAAAAGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACggg                                                                                                      >  4:219260/1‑142 (MQ=255)
                                                           aaGCTGCGGCGTTACGTCGACATGCCGGTCAACGAGGGGTGGAAAAGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCAt                                                                                           <  1:361558/149‑1 (MQ=255)
                                                             gCTGCGGCGTTACGTCGACATGCCGGTCAACGAGGGGTGGAAAAGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGt                                                                                                                >  6:260687/1‑126 (MQ=255)
                                                             gCTGCGGCGTTACGTCGACATGCCGGTCAACGAGGGGTGGAAAAGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGt                                                                                                                <  5:260687/126‑1 (MQ=255)
                                                             gCTGCGGCGTTACGTCGACATGCCGGTCAACGAGGGGTGGAAAAGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCATGa                                                                                         <  5:144374/149‑1 (MQ=255)
                                                                     gTTACGTCGACATGCCGGTCAACGAGGGGTGGAAAAGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCATGACGTTGAcc                                                                                 >  6:32998/1‑149 (MQ=255)
                                                                        aCGTCGACATGCCGGTCAACGAGGGGTGGAAAAGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCATGACGTTGACCGGc                                                                              >  7:28920/1‑149 (MQ=255)
                                                                           tCGACATGCCGGTCAACGAGGGGTGGAAAAGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGggtggtg                                                                                                                           >  2:44053/1‑101 (MQ=255)
                                                                           tCGACATGCCGGTCAACGAGGGGTGGAAAAGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGggtggtg                                                                                                                           <  1:44053/101‑1 (MQ=255)
                                                                              aCATGCCGGTCAACGAGGGGTGGAAAAGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCATGACGTTGACCGGCGAGTAc                                                                        >  8:166999/1‑149 (MQ=255)
                                                                                   ccGGTCAACGAGGGGTGGAAAAGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCATGACGTTGACCGGCGAGTACCTggg                                                                   >  3:318059/1‑149 (MQ=255)
                                                                                   ccGGTCAACGAGGGGTGGAAAAGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCATGACGTTGACCGGCGAGTACCTgg                                                                    <  6:89363/148‑1 (MQ=255)
                                                                                         aaCGAGGGGTGGAAAAGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCATGACGTTGACCGGCGAGTACCTGGGCAgcgc                                                             >  7:319286/1‑149 (MQ=255)
                                                                                                ggTGGAAAAGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCATGACGTTGACCGGCGAGTACCTGGGCAGCGCTGCCGTc                                                      <  4:48038/149‑1 (MQ=255)
                                                                                                  tGGAAAAGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCATGACGTTGACCGGCGAGTACCTGGGCAGCGCTGCCGTCAt                                                    >  1:163231/1‑149 (MQ=255)
                                                                                                   ggAAAAGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGccgcgcttttccacccctcgttgaccggcatgtcgacgtaacgccgcagcttgctgccgtattccggccgcatgcggcgactgccgagtggcgtggtc                                                    <  8:167196‑M2/148‑99 (MQ=255)
                                                                                                     aaaaGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCATGACGTTGACCGGCGAGTACCTGGGCAGCGCTGCCGTCATg                                                   >  3:117881/1‑147 (MQ=255)
                                                                                                      aaaGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCATGACGTTGACCGGCGAGTACCTGGGCAGCGCTGCCGTCATGGAg                                                <  3:219260/149‑1 (MQ=255)
                                                                                                      aaaGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCATGACGTTGACCGGCGAGTACCTGGGCAGCGCTGCCGTCATGGAg                                                <  5:372204/149‑1 (MQ=255)
                                                                                                       aaGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGccgcgcttttccacccctcgttgaccggcatgtcgacgtaacgccgcagcttgctgccgtattccggccgcatacggcg                                                                       >  2:46835‑M2/1‑46 (MQ=255)
                                                                                                       aaGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGccgcgcttttccacccctcgttgaccggcatgtcgacgtaacgccgcagcttgctgccgtattccggccgcatacggcg                                                                       <  1:46835‑M2/125‑80 (MQ=255)
                                                                                                       aaGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCATGACGTTGACCGGCGAGTACCTGGGCAGCGCTGCCGTCATGGAgg                                               >  8:36134/1‑149 (MQ=255)
                                                                                                        aGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCATGACGTTGACCGGCGAGTACCTGGGCAGCGCTGCCGTCATGGAgg                                               >  3:92606/1‑148 (MQ=255)
                                                                                                            cgGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCATGACGTTGACCGGCGAGTACCTGGGCAGCGCTGCCGTCATGGAGGTAAcc                                          <  8:319286/149‑1 (MQ=255)
                                                                                                             ggTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCATGACGTTGACCGGCGAGTACCTGGGCAGCGCTGCCGTCATGGAGGTAACCg                                         <  8:28920/149‑1 (MQ=255)
                                                                                                               tACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCATGACGTTGACCGGCGAGTACCTGGGCAGCGCTGCCGTCATGGAGGTAACCGCa                                       <  7:166999/149‑1 (MQ=255)
                                                                                                                  aGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCATGACGtt                                                                                     <  1:255995/100‑1 (MQ=255)
                                                                                                                  aGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCATGACGtt                                                                                     >  2:255995/1‑100 (MQ=255)
                                                                                                                    gCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCATGACGTTGACCGGCGAGTACCTGGGCAGCGCTGCCGTCATGGAGGTAACCGCATGATc                                  <  7:164912/149‑1 (MQ=255)
                                                                                                                    gCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCATGACGTTGACCGGCGAGTACCTGGGCAGCGCTGCCGTCATGGAGGTAACCGCATGATc                                  <  7:278777/149‑1 (MQ=255)
                                                                                                                    gCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCATGACGTTGACCGGCGAGTACCTGGGCAGCGCTGCCGTCATGGAGGTAACCGCATGATc                                  >  1:59775/1‑149 (MQ=255)
                                                                                                                       gAGGTGGCCGGGGCCTTGGGCCGCCGGGAGCCGCGCTTGCTGCTGGACCGGGTGGTGGTCACCTCGGTGCGTGACGGGCCGATCGGCATGACGTTGACCGGCGAGTACCTGGGCAGCGCTGCCGGCATGGAGGTAACCGCATGATCGAc                               <  8:356941/149‑1 (MQ=255)
                                                                                                                              cccGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCATGACGTTGACCGGCGAGTACCTGGGCAGCGCTGCCGTCATGGAg                                                >  2:384983/1‑125 (MQ=255)
                                                                                                                              cccGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCATGACGTTGACCGGCGAGTACCTGGGCAGCGCTGCCGTCATGGAg                                                <  1:384983/125‑1 (MQ=255)
                                                                                                                                 gTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCATGACGTTGACCGGCGAGTACCTGGGCAGCGCTGCCGTCATGGAGGTAACCGCATGATCGACCTTTCCctgc                     >  6:225251/1‑149 (MQ=255)
                                                                                                                                    ccTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCATGACGTTGACCGGCGAGTACCTGGGCAGCGCTGCCGTCATGGAGGTAACCGCATGATCGACCTTTCCCtgctgc                  >  1:208202/1‑149 (MQ=255)
                                                                                                                                     cTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCATGACGTTGACCGGCGAGTACCTGGGCAGCGCTGCCGTCATGGAGGTAACCGCATGATCGACCTTTCCCTGCTGcc                 >  7:10708/1‑149 (MQ=255)
                                                                                                                                          gCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCATGACGTTGACCGGCGAGTACCTGGGCAGCGCTGCCGTCATGGAGGTAACCGCATGATCGACCTTTCCCTGCTGCCTCCGc            <  5:32998/149‑1 (MQ=255)
                                                                                                                                          gCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCATGACGTTGACCGGCGAGTACCTGGGCAGCGCTGCCGTCATGGAGGTAACCGCATGATCGACCTTTCCCTGCTGCCTCCGc            >  7:240465/1‑149 (MQ=255)
                                                                                                                                             gCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCATGACGTTGACCGGCGAGTACCTGGGCAGCGCTGCCGTCATGGAGGTAACCGCATGATCGACCTTTCCCTGCTGCCTCCGccc          >  1:62581/1‑148 (MQ=255)
                                                                                                                                               tGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCATGACGTTGACCGGCGAGTACCTGGGCAGCGCTGCCGTCATGGAGGTAACCGCATGATCGACCTTTCCCTGCTGCCTCCGCCCGAc       >  3:299634/1‑149 (MQ=255)
                                                                                                                                                gggAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCATGACGTTGACCGGCGAGTACCTGGGCAGCGCTGCCGTCATGGAGGTAACCGCATGATCGACCTTTCCCTGCTGCCTCCGCCCGACg      <  2:163231/149‑1 (MQ=255)
                                                                                                                                                    gCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCATGACGTTGACCGGCGAGTACCTGGGCAGCGCTGCCGTCATGGAGGTAACCGCATGATCGACCTTTCCCTGCTGCCTCCGCCCGACgtggt  <  7:36134/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
TCGAAGACATCTTGACCACGCCACTCGGCAGTCGCCGCATGCGGCCGGAATACGGCAGCAAGCTGCGGCGTTACGTCGACATGCCGGTCAACGAGGGGTGGAAAAGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTGGTCACCTCGGTGCTTGACGGGCAGATCGGCATGACGTTGACCGGCGAGTACCTGGGCAGCGCTGCCGTCATGGAGGTAACCGCATGATCGACCTTTCCCTGCTGCCTCCGCCCGACGTGGT  >  NC_002947/3434830‑3435126

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.