New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3807518 =	57 (0.920)	3 (0.050)	3/258	NT	5.0%	coding (2134/2544 nt)	PP_3364	two‑component system response regulator
	?	NC_002947	3807557 =	58 (0.960)					coding (2173/2544 nt)	PP_3364	two‑component system response regulator

ATCCCGTTCGACCTGGGTGGCACCAGCGCGGTGGAATATCACCCCGAAGGCCTGCAAGGCTTTTTCAGAATCCCGGCCAAGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACGTGATCACCGCCAGCTCCGAGGACCAAGCCATGCAACTGCTTGGCAG  >  NC_002947/3807410‑3807705                                                                                                                                                    |                                                                                                                                                      aTCCCGTTCGACCTGGGTGGCACCAGCGCGGTGGAATATCACCCCGAAGGCCTGCAAGGCTTTTTCAGAATCCCGGCCAAGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGc                                                                                                                                                      <  2:50760/149‑1 (MQ=255)    ccGTTCGACCTGGGTGGCACCAGCGCGGTGTAATATCACCCCGAAGGCCTGCAAGGCTTTTTCAGAATCCCGGCCAAGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGtt                                                                                                                                                   >  1:34483/1‑149 (MQ=255)     cGTTCGACCTGGGTGGCACCAGCGCGGTGGAATATCACCCCGAAGGCCTGCAAGGCTTTTTCAGAATCCCGGCCAAGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGttt                                                                                                                                                  >  1:55695/1‑149 (MQ=255)      cgtccttgatttgcgcatcgttgagaatttgctccaggcctaccgcaatcaccagttgatcctcgagtatcagcacacacaagcccgagcgcgctgcaaacgcACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTg                                                                                                                                                 >  2:215265‑M1/104‑149 (MQ=255)       ttCGACCTGGGTGGCACCAGCGCGGTGGAATATCACCCCGAAGGCCTGCAAGGCTTTTTCAGAATCCCGGCCAAGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGc                                                                                                                                                >  7:195360/1‑149 (MQ=255)         cGACCTGGGTGGCACCAGCGCGGGGGAATATCACCCCGAAGGCCTGCAAGGCTTTTTCAGAATCCCGGCCAAGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCa                                                                                                                                               <  4:379583/148‑1 (MQ=255)          gACCTGGGTGGCACCAGTGCGGTGGAATATCACCCCGAAGGCCTGCAAGGCTTTTTCAGAATCCCGGCCAAGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAgc                                                                                                                                             <  6:343914/149‑1 (MQ=255)                      aCCAGCGCGGTGGAATATCACCCCGAAGGCCTGCAAGGCTTTTTCAGAATCCCGGCCAAGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCtt                                                                                                                                >  3:72326/1‑149 (MQ=255)                      aCCAGCGCGGTGGAATATCACCCCGAAGGCCTGCAAGGCTTTTTCAGAATCCCGGCCAAGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACCGTGCGTTTGCAGCGCG‑CTCGGGCtt                                                                                                                                >  5:221320/1‑149 (MQ=255)                        cAGCGCGGTGGAATATCACCCCGAAGGCCTGCAAGGCTTTTTCAGAATCCCGGCCAAGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTtgt                                                                                                                              <  5:83615/149‑1 (MQ=255)                          gcgcGGTGGAATATCACCCCGAAGGCCTGCAAGGCTTTTTCAGAATCCCGGCCAAGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTtgtgt                                                                                                                            >  4:307544/1‑149 (MQ=255)                                tGGAATATCACCCCGAAGGCCTGCAAGGCTTTTTCAGAATCCCGGCCAAGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCt                                                                                                                       >  1:311729/1‑148 (MQ=255)                                      atCACCCCGAAGGCCTGCAAGGCTTTTTCAGAATCCCGGCCAAGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGtt                                                                                                                                                   <  4:49795/115‑1 (MQ=255)                                      atCACCCCGAAGGCCTGCAAGGCTTTTTCAGAATCCCGGCCAAGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGtt                                                                                                                                                   >  3:49795/1‑115 (MQ=255)                                       tCACCCCGAAGGCCTGCAAGGCTTTTTCAGAATCCCGGCCAAGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTc                                                                                                                >  2:382470/1‑148 (MQ=255)                                       tCACCCCGAAGGCCTGCAAGGCTTTTTCAGAATCCCGGCCAAGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCg                                                                                                               <  2:311729/149‑1 (MQ=255)                                        cACCCCGAAGGCCTGCAAGGCTTTTTCAGAATCCCGGCCAAGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTc                                                                                                                >  7:256923/1‑147 (MQ=255)                                         aCCCCGAAGGCCTGCAAGGCTTTTTCAGAATCCCGGCCAAGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCGCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGa                                                                                                              <  2:18206/148‑1 (MQ=255)                                         aCCCCGAAGGCCTGCAAGGCTTTTTCAGAATCCCGGCCAAGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGa                                                                                                              <  8:233977/148‑1 (MQ=255)                                         aCCCCGAAGGCCTGCAAGGCTTTTTCAGAATCCCGGCCAAGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGa                                                                                                              <  1:368981/148‑1 (MQ=255)                                           cccGAAGGCCTGCAAGGCTTTTTCAGAATCCCGGCCAAGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGa                                                                                                           >  3:106149/1‑149 (MQ=255)                                            ccGAAGGCCTGCAAGGCTTTTTCAGAATCCCGGCCAAGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGAt                                                                                                          >  2:195897/1‑149 (MQ=255)                                                aGGCCTGCAAGGCTTTTTCAGAATCCCGGCCAAGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAAc                                                                                                      <  6:189241/149‑1 (MQ=255)                                                 ggCCTGCAAGGCTTTTTCAGAATCCCGGCCAAGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACt                                                                                                     <  8:195360/149‑1 (MQ=255)                                                   ccTGCAAGGCTTTTTCAGAATCCCGGCCAAGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTgg                                                                                                   >  2:309847/1‑149 (MQ=255)                                                    cTGCAAGGCTTTTTCAGAATCCCGGCCAAGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGt                                                                                                  <  2:207035/149‑1 (MQ=255)                                                       cAAGGCTTTTTCAGAATCCCGGCCAAGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCACGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGATGATCAACTGGTGAt                                                                                               >  3:224532/1‑149 (MQ=255)                                                          ggCTTTTTCAGAATCCCGGCCAAGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGc                                                                                            >  1:356532/1‑149 (MQ=255)                                                               tttCAGAATCCCGGCCAAGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTa                                                                                        <  2:356532/148‑1 (MQ=255)                                                                ttCAGAATCCCGGCCAAGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAgg                                                                                      >  1:11914/1‑149 (MQ=255)                                                                ttCAGAATCCCGGCCAAGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAg                                                                                       <  2:55695/148‑1 (MQ=255)                                                                 tCAGAATCCCGGCCAAGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGc                                                                                     >  6:38451/1‑149 (MQ=255)                                                                    gAATCCCGGCCAAGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTg                                                                                  <  5:2891/149‑1 (MQ=255)                                                                       tCCCGGCCAAGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAg                                                                               <  8:256923/149‑1 (MQ=255)                                                                                aGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTGTCCCGGCCAGGCGTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATtctc                                                                      <  6:79596/149‑1 (MQ=255)                                                                                  cACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCaa                                                                    <  7:120068/149‑1 (MQ=255)                                                                                  cACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCaa                                                                    <  2:34483/149‑1 (MQ=255)                                                                                  cACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGAGATTGCGGTAGGCCTGGAGCAAATTCTCaa                                                                    <  1:32705/149‑1 (MQ=255)                                                                                       ttCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAgg                                                                                                            <  4:150583/104‑1 (MQ=255)                                                                                       ttCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAgg                                                                                                            >  3:150583/1‑104 (MQ=255)                                                                                          cGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATgcg                                                             >  1:88083/1‑148 (MQ=255)                                                                                               ccGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATc                                                       <  2:174147/149‑1 (MQ=255)                                                                                               ccGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCA‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGc                                                                                     <  2:293678/119‑1 (MQ=255)                                                                                                cGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATc                                                       >  8:360444/1‑148 (MQ=255)                                                                                                 gAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATc                                                       >  4:120120/1‑147 (MQ=255)                                                                                                 gAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCaa                                                     <  6:221320/149‑1 (MQ=255)                                                                                                   aGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAgg                                                   <  3:372509/149‑1 (MQ=255)                                                                                                      ggCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACg                                                >  7:228050/1‑149 (MQ=255)                                                                                                      caaacgcaccgttcgcacgggccagaggcgtggccgggagagcggtGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACg                                                >  2:215265‑M2/47‑149 (MQ=255)                                                                                                        cAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACGt                                               >  2:82122/1‑148 (MQ=255)                                                                                                         aGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCTAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGTGCAAATCAAGGACGTGa                                             <  1:309847/149‑1 (MQ=255)                                                                                                          gAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACGTGAt                                            <  7:261774/149‑1 (MQ=255)                                                                                                           aaaCCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACGTGAt                                            >  1:260597/1‑148 (MQ=255)                                                                                                             accgttcgcacgggccagaggcgtggccgggagagcggtGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACGTGATCAc                                         >  2:26738‑M2/40‑149 (MQ=255)                                                                                                             ACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCGGCTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACGTGATCa                                          <  1:290482‑M1/149‑1 (MQ=255)                                                                                                              ccgttcgcacgggccagaggcgtggccgggagagcggtGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACGTGATCAcc                                        >  8:59473‑M2/39‑149 (MQ=255)                                                                                                               CGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACGTGATCACCg                                       <  1:282001‑M1/149‑1 (MQ=255)                                                                                                                   ctcCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACGTGATCACCGCCAg                                   >  6:176897/1‑149 (MQ=255)                                                                                                                      ccGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACGTGATCACCGCCAGCTc                                >  1:27984/1‑149 (MQ=255)                                                                                                                      ccGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACGTGATCACCGCCAGCTc                                >  7:185975/1‑149 (MQ=255)                                                                                                                      ccGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACGTGATCACCGCCAGCTc                                >  1:33980/1‑149 (MQ=255)                                                                                                                         gCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACGTGATCACCGCCAGCTCCGa                             <  3:307544/149‑1 (MQ=255)                                                                                                                         gCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACGTGATCACCGCCAGCTCCGa                             <  2:88083/149‑1 (MQ=255)                                                                                                                              gCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACGTGATCACCGCCAGCTCCGAGGAc                         >  8:32128/1‑148 (MQ=255)                                                                                                                              gCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACGTGATCACCGCCAGCTCCGAGGAc                         >  2:376023/1‑148 (MQ=255)                                                                                                                                ctctGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACGTGATCACCGCCAGCTCCGAGGACCaa                      <  1:382470/149‑1 (MQ=255)                                                                                                                                       ccGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACGTGATCACCGCCAGCTCCGAGGACCAAGCCATGc               <  1:195897/149‑1 (MQ=255)                                                                                                                                       ccGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGATTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGAGGTAGGCCTGGAGCAAATTCTCAACGATGCGAAAATCAAGGACGTGATCACCGCCAGCTCCGAGGACCAAGCCATg                >  6:184721/1‑148 (MQ=255)                                                                                                                                            cGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTAAACGATCAGCAAATCAAGGACGTGATCACCGCCAGCGCCGAGGACCACGCCCTGCac             >  8:331786/1‑145 (MQ=255)                                                                                                                                             gAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACGTGATCACCGCCAGCTCCGAGGACCAAGCCATGCAACTGc         <  8:228050/149‑1 (MQ=255)                                                                                                                                               gcggtGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACGTGATCACCGCCAGCTCCGAGGACCAAGCCATGCAACTGCtt       <  1:26738‑M2/144‑1 (MQ=255)                                                                                                                                               aCGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACGTGATCACCGCCAGCTCCGAGGACCAAGCCATGCAACTGCtt       <  2:27984/149‑1 (MQ=255)                                                                                                                                               aCGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACGTGATCACCGCCAGCTCCGAGGACCAAGCCATGCAACTGCtt       <  2:33980/149‑1 (MQ=255)                                                                                                                                               aCGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACGTGATCACCGCCAGCTCCGAGGACCAAGCCATGCAACTGCtt       <  4:72326/149‑1 (MQ=255)                                                                                                                                                cggtGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACGTGATCACCGCCAGCTCCGTGGACCAAGCCATGCAACTGCtt       <  7:59473‑M2/144‑1 (MQ=255)                                                                                                                                                 ggtGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACGTGATCACCGCCAGCTCCGAGGACCAAGCCATGCAACTGCTTgg     <  2:260597‑M2/146‑1 (MQ=255)                                                                                                                                                  gtGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACGTGATCACCGCCAGCTCCGAGGACCAAGCCATGCAACTGCTTGGc    <  4:106149‑M2/147‑1 (MQ=255)                                                                                                                                                    gCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACGTGATCACCGCCAGCTCCGAGGACCAAGCCATGCAACTGCTTGGCAg  >  5:252666/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                      ATCCCGTTCGACCTGGGTGGCACCAGCGCGGTGGAATATCACCCCGAAGGCCTGCAAGGCTTTTTCAGAATCCCGGCCAAGCACCTTTCCGTAGCCGAAGCGGCAGAAACCGCTCTCCCGGCCACGCCTCTGGCCCGTGCGAACGGTGCGTTTGCAGCGCG‑CTCGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACGTGATCACCGCCAGCTCCGAGGACCAAGCCATGCAACTGCTTGGCAG  >  NC_002947/3807410‑3807705

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.