New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4808179	1 (0.020)	7 (0.130)	4/226	NT	19.8%	intergenic (‑288/‑267)	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
	?	NC_002947	= 5988949	56 (1.060)					intergenic (+243/‑303)	kefB‑III/PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA

CCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTA  >  NC_002947/5988806‑5989095                                                                                                                                                  |                                                                                                                                                   ccAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCcgcccgcg                                                                                                                                              >  5:306057/1‑147 (MQ=9)  caattATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTG‑GAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCgcgggc                                                                                                                                             >  3:218777/4‑149 (MQ=14)         tCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTA‑CCCGCG‑AGCGCCGCCCGCGCGGCGCttc                                                                                                                                     >  1:142245/1‑147 (MQ=2)                    gcgcACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATgg                                                                                                                            >  2:140266/1‑149 (MQ=255)                      gcACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGgc                                                                                                                          <  7:122202/149‑1 (MQ=255)                        aCGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGgcgc                                                                                                                        <  8:301570/149‑1 (MQ=255)                         cgcgAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGcc                                                                                                                       <  6:392535/149‑1 (MQ=255)                            gAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCa                                                                                                                     >  2:326394/1‑148 (MQ=255)                                  ccTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTa                                                                                                              >  6:154562/1‑149 (MQ=255)                                  ccTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTa                                                                                                              >  3:175406/1‑149 (MQ=255)                                  ccTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTa                                                                                                              <  2:354696/149‑1 (MQ=255)                                      gcgcACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGgc                                                                                                                          <  8:106292/133‑1 (MQ=255)                                      gcgcACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGgc                                                                                                                          >  7:106292/1‑133 (MQ=255)                                          aCGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAgg                                                                                                      <  1:326394/149‑1 (MQ=255)                                             ccTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGc                                                                                                          <  2:202365/142‑1 (MQ=255)                                             ccTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGc                                                                                                          >  1:202365/1‑142 (MQ=255)                                              cTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCAcc                                                                                                  >  2:131531/1‑149 (MQ=255)                                                 gATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTg                                                                                                <  6:153200/148‑1 (MQ=255)                                                     tCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGTGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CAAGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGc                                                                                           >  3:213974/1‑149 (MQ=255)                                                       gcgTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGaa                                                                                             <  1:140266/145‑1 (MQ=255)                                                             tACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGc                                                                                   <  5:154562/149‑1 (MQ=255)                                                              tgccccaaggcggTCGCGCGCAAATCCCG‑CAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGcgcgggcggcgctcgatctcccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaa                                                                                  >  7:113541‑M2/6‑83 (MQ=255)                                                              acaaacaaGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGc                                                                                   >  2:364310/1‑148 (MQ=255)                                                                aaacaaGGCGGTCGCGCGCGCCTGGCAGCAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCaa                                                                                 >  1:17786/1‑149 (MQ=255)                                                                aaacaaGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAAt                                                                                <  7:53304/149‑1 (MQ=255)                                                                aaacaaGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAAt                                                                                >  1:83465/1‑149 (MQ=255)                                                                 cccaaggCGGTCGCGCGCAAATCCCG‑CAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGcgcgggcggcgctcgatctcccaggcgctgaaactctcccggc                                                                                                         <  8:297976‑M2/121‑44 (MQ=255)                                                                 cccaaggCGGTCGCGCGCAAATCCCG‑CAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGcgcgggcggcgctcgatctcccaggcgctgaaactctcccggc                                                                                                         >  7:297976‑M2/3‑80 (MQ=255)                                                                    aaGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGGGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAATAACTATCGCCAGGCACCCGGAAGCCATCCTGCAATTTcc                                                                            <  2:8097/149‑1 (MQ=255)                                                                    aaGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTcc                                                                            >  6:90340/1‑149 (MQ=255)                                                                    aaGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTcc                                                                            <  5:183186/149‑1 (MQ=255)                                                                     aGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCt                                                                           <  2:384295/149‑1 (MQ=255)                                                                          gTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCGGCAATTTCCTGACGa                                                                      >  8:336084/1‑149 (MQ=255)                                                                              cgcgcgcCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCAc                                                                  >  6:386372/1‑149 (MQ=255)                                                                                   gcCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCAc                                                                  <  1:47885/144‑1 (MQ=255)                                                                                   gcCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCAc                                                                  >  2:47885/1‑144 (MQ=255)                                                                                        gCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCgccgcc                                                         <  8:178486/148‑1 (MQ=255)                                                                                        gCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCa                                                        >  3:193115/1‑149 (MQ=255)                                                                                          a‑caGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCAt                                                       >  6:114965/1‑148 (MQ=255)                                                                                            caGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGa                                                     <  4:175406/149‑1 (MQ=255)                                                                                              ggaggGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGAcg                                                   <  4:134634/149‑1 (MQ=255)                                                                                               gaggGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGAcgc                                                  >  3:238110/1‑149 (MQ=255)                                                                                               gaggGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGAcgc                                                  >  4:136370/1‑149 (MQ=255)                                                                                               gaggGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGAcgc                                                  <  3:136370/149‑1 (MQ=255)                                                                                                     ttGGCCCGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGcgcgggcggcgctcgatctcccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctgaaaacctccc                                            <  1:194771‑M2/149‑105 (MQ=255)                                                                                                     ttGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTc                                            <  5:386372/149‑1 (MQ=255)                                                                                                       ggCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTca                                           <  5:90340/148‑1 (MQ=255)                                                                                                           cgaAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGcgcgggcggcgctcgatctcccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatccaccggcgaaaacctaccaggctctgaaaccctcccgccaa                                       <  3:353102‑M2/147‑110 (MQ=255)                                                                                                               acaaacGTAGGAGCGGGTTTA‑CCCGCGAATCGCATCGCGGGCGGCGCTCGATCTCATGGTCGCCCAAAAACTATCGCCAGGCAACTGTAAGCCATACTGAAATTTCCTGACGATCACATCGCCGCCATGACTCGAACTCAAAAAAAca                                   >  7:171304/1‑147 (MQ=25)                                                                                                               acaaacGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGCGCCGCGCTCGATCTCATGCCCGCCCAAAAACAATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAAcc                                   >  7:176365/1‑148 (MQ=38)                                                                                                                  aacGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATca                               >  6:13080/1‑149 (MQ=255)                                                                                                                      tAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTc                                                               >  5:346607/1‑113 (MQ=255)                                                                                                                      tAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTc                                                               <  6:346607/113‑1 (MQ=255)                                                                                                                          aGCGGGTTTA‑CCCGCGAAGCGCCTCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGt                       <  3:320622/149‑1 (MQ=255)                                                                                                                          aGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGt                       >  4:142370/1‑149 (MQ=255)                                                                                                                           gCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTc                      <  5:114965/149‑1 (MQ=255)                                                                                                                              ggTTTACCCCGATAAGCGCCGCGGGGGGGGCGCTCTATCTAATAAGGTCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTa                    <  1:131531/149‑1 (MQ=255)                                                                                                                                   a‑CCCGCGAAGCGCCGcgcgggcggcgctcgatctcccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccaggagctgaaagcctcccgccaaacacctaaccgcccaagcgcgaatt              <  5:8152‑M2/149‑135 (MQ=255)                                                                                                                                     cccGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCa             <  1:364310/149‑1 (MQ=255)                                                                                                                                      ccGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAg            >  8:131780/1‑149 (MQ=255)                                                                                                                                       cgcgAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGc           >  6:293350/1‑149 (MQ=255)                                                                                                                                       cgcgAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGc           >  6:288146/1‑149 (MQ=255)                                                                                                                                        gcgAAGCGCCGCGCGGGCGGCGCTCGCTCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCt          >  5:69240/1‑149 (MQ=255)                                                                                                                                          gAAGCGCCGCGCGGGCGGCGCTCGATCTCATGTGCGCACAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCAATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTgg        <  4:213974/149‑1 (MQ=255)                                                                                                                                          gAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTgg        <  3:315748/149‑1 (MQ=255)                                                                                                                                          cgagcGCCGcccgcgcggcgcttgatctcccaggcgctgaaactctcccggcgaacacatcccaggcgctgaaaatcgcacggcgaa                                                                      <  1:123287‑M2/85‑79 (MQ=255)                                                                                                                                           gaGCGCCGCCCGCGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTggg       >  8:143867/2‑149 (MQ=255)                                                                                                                                                ccgcgcgggcggcgctcgatctcccaggcgctgacactctcccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctgaaaacctcccgccaaacacctacccgccaaagcgcgaattccgcccattgcc  >  3:241948‑M2/1‑3 (MQ=255)                                                                                                                                                  |                                                                                                                                                   CCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTA‑CCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTA  >  NC_002947/5988806‑5989095

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.