New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5460311 =	62 (1.000)	5 (0.090)	4/250	NT	8.3%	coding (730/1038 nt)	holA	DNA polymerase III subunit delta
	?	NC_002947	5460360 =	52 (0.890)					coding (779/1038 nt)	holA	DNA polymerase III subunit delta

GCCCGCTTCGATGTCTTCGGCCTGGTCGATGCCATTCTCAACGGCGAGGCTGCGCATGCCCTGCGTATGCTCGAAGGCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACAAACGCCGACCGCTGGTCAGCAAGGCCCTGCAGCGCCTCTCGGCGCAGCGTTGGGCGCAACTGCTGCAGGATGCC  >  NC_002947/5460212‑5460508                                                                                                                                                     |                                                                                                                                                      ccttgctgaccagcggtcggcgtttgtcccagatgggcgggcgggcctggctgaacgctttgtccaatggcacgccttggctgaactgctgggctagccCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCggg                                                                                                                                                       >  6:365438‑M1/100‑149 (MQ=255)  cccGCTTCGATGTCTTCGGCCTGGTCGATGCCATTCTCAACGGCGAGGCTGCGCATGCCCTGCGTATGCTCGAAGGCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCggg                                                                                                                                                       <  5:330219/148‑1 (MQ=255)   ccGCTTCGATGTCTTCGGCCTGGTCGATGCCATTCTCAACGGCGAGGCTGCGCATGCCCTGCGTATGCTCGAAGGCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGc                                                                                                                                                     >  2:371361/1‑149 (MQ=255)   ccGCTTCGATGTCTTCGGCCTGGTCGATGCCATTCTCAACGGCGAGGCTGCGCATGCCCTGCGTATGCTCGAAGGCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGc                                                                                                                                                     <  4:153450/149‑1 (MQ=255)   ccGCTTCGATGTCTTCGGCCTGGTCGATGCCATTCTCAACGGCGAGGCTGCGCATGCCCTGCGTATGCTCGAAGGCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGc                                                                                                                                                     <  4:194290/149‑1 (MQ=255)   ccGCTTCGATGTCTTCGGCCTGGTCGATGCCATTCTCAACGGCGAGGCTGCGCATGCCCTGCGTATGCTCGAAGGCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGc                                                                                                                                                     >  5:153015/1‑149 (MQ=255)   ccGCTTCGATGTCTTCGGCCTGGTCGATGCCATTCTCAACGGCGAGGCTGCGCATGCCCTGCGTATGCTCGAAGGCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGc                                                                                                                                                     <  7:104028/149‑1 (MQ=255)         cGATGTCTTCGGCCTGGTCGATGCCATTCTCAACGGCGAGGCTGCGCATGCCCTGCGTATGCTCGAAGGCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGcc                                                                                                                                                <  8:283317/148‑1 (MQ=255)         cGATGTCTTCGGCCTGCTCGATGCCATTCTCAACGGCGAGGCTGCGCATGGCCTGCGTATGCTCGAAGGCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCTTCCTGTGGGGCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGcc                                                                                                                                                <  7:159143/148‑1 (MQ=255)          gATGTCTTCGGCCTGGTCGATGCCATTCTCAACGGCGAGGCTGCGCATGCCCTGCGTATGCTCGAAGGCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGcc                                                                                                                                                >  6:263486/1‑147 (MQ=255)           cagcggtcggcgtttgtcccagatgggcgggcgggcctggctgaacgctttgtccaatggcacgccttggctgaactgctgggctagccCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCggg                                                                                                                                                       >  1:10125‑M1/90‑139 (MQ=255)           cagcggtcggcgtttgtcccagatgggcgggcgggcctggctgaacgctttgtccaatggcacgccttggctgaactgctgggctagccCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCggg                                                                                                                                                       <  2:10125‑M1/50‑1 (MQ=255)           aTGTCTTCGGCCTGGTCGATGCCATTCTCAACGGCGAGGCTGCGCATGCCCTGCGTATGCTCGAAGGCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCcag                                                                                                                                             >  5:178090/1‑149 (MQ=255)           aTGTCTTCGGCCTGGTCGATGCCATTCTCAACGGCGAGGCTGCGCATGCCCTGCGTATGCTCGAAGGCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCcag                                                                                                                                             >  6:380931/1‑149 (MQ=255)           aTGTCTTCGGCCTGGGCGATGCCATTCTCAACGGCGAGGCTGCGCATGCCCTGCGTATGCTCGAAGGCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCcag                                                                                                                                             <  3:95481/149‑1 (MQ=255)               cTTCGGCCTGGTCGATGCCATTCTCAACGGCGAGGCTGCGCATGCCCTGCGTATGCTCGAAGGCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCcagc‑ag                                                                                                                                         <  3:30953/148‑1 (MQ=255)               cTTCGGCCTGGTCGATGCCATTCTCAACGGCGAGGCTGCGCATGCCCTGCGTATGCTCGAAGGCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGt                                                                                                                                        >  3:164190/1‑149 (MQ=255)                ttCGGCCTGGTCGATGCCATTCTCAACGGCGAGGCTGCGCATGCCCTGCGTATGCTCGAAGGCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGtt                                                                                                                                       >  1:379631/1‑149 (MQ=255)                   ggCCTGGTCGATGCCATTCTCAACGGCGAGGCTGCGCATGCCCTGCGTATGCTCGAAGGCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCa                                                                                                                                     <  1:347306/148‑1 (MQ=255)                   ggCCTGGTCGATGCCATTCTCAACGGCGAGGCTGCGCATGCCCTGCGTATGCTCGAAGGCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACT‑GCTGGGCTAGCCccgccagttgg                                                                                                                                     <  2:177663/148‑8 (MQ=255)                    gCCTGGTCGATGCCATTCTCAACGGCGAGGCTGCGCATGCCCTGCGTATGCTCGAAGGCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGc                                                                                                                                   >  4:259043/1‑149 (MQ=255)                        cgTCGATGCCATTCTCAACGGCGAGGCTGCGCATGCCCTGCGTATGCTCGAAGGCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAg                                                                                                                               <  8:359537/148‑1 (MQ=255)                             aTGCCATTCTCAACGGCGAGGCTGCGCATGCCCTGCGTATGCTCGAAGGCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTg                                                                                                                          <  3:30637/149‑1 (MQ=255)                                  aTTCTCAACGGCGAGGCTGCGCATGCCCTGCGTATGCTCGAAGGCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCAtt                                                                                                                     >  3:15416/1‑149 (MQ=255)                                     ctcAACGGCGAGGCTGCGCATGCCCTGCGTATGCTCGAAGGCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTgg                                                                                                                   <  4:164190/148‑1 (MQ=255)                                      tcAACGGCGAGGCTGCGCATGCCCTGCGTATGCTCGAAGGCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGa                                                                                                                  >  5:348016/1‑148 (MQ=255)                                         aCGGCGAGGCTGCGCATGCCCTGCGTATGCTCGAAGGCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACaaa                                                                                                              <  2:367036/149‑1 (MQ=255)                                         aCGGCGAGGCTGCGCATGCCCTGCGTATGCTCGAAGGCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACaaa                                                                                                              <  5:263486/149‑1 (MQ=255)                                          cGGCGAGGCTGCGCATGCCCTGCGTATGCTCGAAGGCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAg                                                                                                             <  1:363667/149‑1 (MQ=255)                                                ggCTGCGCATGCCCTGCGTATGCTCGAAGGCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCa                                                                                                       <  1:371361/149‑1 (MQ=255)                                                 gCTGCGCATGCCCTGCGTATGCTCGAAGGCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCa                                                                                                       <  6:196107/148‑1 (MQ=255)                                                      gcATGCCCTGCGTATGCTCGAAGGCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAgg                                                                                                 <  6:153015/149‑1 (MQ=255)                                                                      cTCGAAGGCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTg                                                                                 <  2:379631/149‑1 (MQ=255)                                                                       tCGAAGGCTTGCGCTGTGAAGGTGTGGCGCCGCCATTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTgg                                                                                <  4:15416/149‑1 (MQ=255)                                                                         gAAGGCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAg                                                                                                                               >  8:7202/1‑100 (MQ=255)                                                                         gAAGGCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAg                                                                                                                               <  7:7202/100‑1 (MQ=255)                                                                         gAAGGCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGa                                                                              >  2:317531/1‑149 (MQ=255)                                                                          agggCATGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGCTAGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGa                                                                              <  1:305446/147‑1 (MQ=255)                                                                             gCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACaaa                                                                          <  7:344320/149‑1 (MQ=255)                                                                                 gcgcGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACAAACGcc                                                                      >  3:73821/1‑149 (MQ=255)                                                                                 gcgcGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACAAACGcc                                                                      >  5:35370/1‑149 (MQ=255)                                                                                   gcgGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACAAACGCCGa                                                                    <  6:178090/149‑1 (MQ=255)                                                                                              gtgGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACAAACGCCGACCg                                                                 <  1:377507/141‑1 (MQ=255)                                                                                              gtgGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGCACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACAAACGCCGACCg                                                                 >  2:377507/1‑141 (MQ=255)                                                                                                   gccgccAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACAAACGCCGACCGCTGGTCAGCAAgg                                                    >  1:241690/1‑149 (MQ=255)                                                                                                   cccgccagttggcgcagctcacgggccaaggcccagaggatgactggcggGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACAAACGCCGACCGCTg                                                              >  1:10125‑M2/51‑139 (MQ=255)                                                                                                   cccgccagttggcgcagctcacgggccaaggcccagaggatgactggcggGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACAAACGCCGACCGCTg                                                              <  2:10125‑M2/89‑1 (MQ=255)                                                                                                   cccgccagttggcgcagctcacgggccaaggcccagaggatgactggcggGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACAAACGCCGACCGCTGGTCAGCAAgg                                                    >  6:365438‑M2/51‑149 (MQ=255)                                                                                                     cgccagttggcgcagctcacgggccaaggcccagaggatgactggcggGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACAAACGCCGACCGCTGGTCAGCAAGGcc                                                  >  3:82449‑M2/49‑149 (MQ=255)                                                                                                     CGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACAAACGCCGACCGCTGGTCAGCAAGGcc                                                  >  3:259043‑M1/1‑149 (MQ=255)                                                                                                                ctctGGGCCTTGGCCTGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACAAACGCCGACCGCTGGTCAGCAAGGCCCTGCAGCGCct                                       <  5:283759/149‑1 (MQ=255)                                                                                                                 tctGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACAAACGCCGACCGCTGGTCAGCAAGGCCCTGCAgcagttg                                      >  7:169783/1‑144 (MQ=255)                                                                                                                     ggCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACAAACGCCGACCGCTGGTCAGCAAGGCCCTGCAGCGCctct                                     <  2:241690/146‑1 (MQ=255)                                                                                                                     ggCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACAAACGCCGACCGCTGGTCAGCAAGGCCCTGCAGCGCCTCTCgg                                  >  5:345229/1‑149 (MQ=255)                                                                                                                     ggCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACAAACGCCGACCGCTGGTCAGCAAGGCCCTGCAGCGCCTCTCgg                                  >  7:363687/1‑149 (MQ=255)                                                                                                                        cTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACAAACGCCGACCGCTGGTCAGCAAGGCCCTGCAGCGCCTCTCGgcg                                >  6:55061/1‑148 (MQ=255)                                                                                                                        cTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACAAACGCCGACCGCTGGTCAGCAAGGCCCTGCAGCGCCTCTCGgcg                                >  6:33868/1‑148 (MQ=255)                                                                                                                        cTTGGCCCGTGAGCCGCGCCAACTGGCGGGGCTAGCCCAGC‑AGATCAGCCAAGGCGTGCCCTTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACAACCGCCGACCGCTGGTCAGCAAGGCCCTGCAGCGCCTCTCGgcgc                               <  8:78068/149‑1 (MQ=255)                                                                                                                         ttGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACAAACGCCGACCGCTGGTCAGCAAGGCCCTGCAGCGCCTCTCGgcg                                >  5:85675/1‑147 (MQ=255)                                                                                                                         ttGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACAAACGCCGACCGCTGGTCAGCAAGGCCCTGCAGCGCCTCTCGgcg                                >  5:290441/1‑147 (MQ=255)                                                                                                                         ttGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACAAACGCCGACCGCTGGTCAGCAAGGCCCTGCAGCGCCTCTCGgcg                                >  2:388109/1‑147 (MQ=255)                                                                                                                         ttGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGGTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACAAACGCCGACCGCTGGTCAGCAAGGCCCTGCAGCGCCTCTCGgcg                                <  6:290441/147‑1 (MQ=255)                                                                                                                          ggccaaggcccagaggatgactggcggGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACAAACGCCGACCGCTGGTCAGCAAGGCCCTGCAGCGCCTCTCGGCGCAg                             <  5:365438‑M2/122‑1 (MQ=255)                                                                                                                                 tGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACAAACGCCGACCGCTGGTCAGCAAGGCCCTGCAGCGCCTCTCGGCGCAGCGTTggg                      <  5:380931/149‑1 (MQ=255)                                                                                                                                     cTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACAAACGCCGACCGCTGGTCAGCAAGGCCCTGCAGCGCCTCTCGGCGCAGCGTTGGgcgc                   >  2:66298/1‑148 (MQ=255)                                                                                                                                      tGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACAAACGCCGACCGCTGGTCAGCAAGGCCCTGCAGCGCCTCTCGGCGCAGCGTTGGGCGCaa                 >  6:88735/1‑149 (MQ=255)                                                                                                                                      tGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACAAACGCCGACCGCTGGTCAGCAAGGCCCTGCAGCGCCTCTCGGCGCAGCGTTGGGCGCa                  >  2:303445/1‑148 (MQ=255)                                                                                                                                         gcCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACAAACGCCGACCGCTGGTCAGCAAGGCCCTGCAGCGCCTCTCGGCGCAGCGTTGGGCGCATctg              <  6:379592/149‑1 (MQ=255)                                                                                                                                         gcCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGCACAAACGCCGACCGCTGGTCAGCAAGGCCCTGCAGCGCCTCTCGGCGCAGCGTTGGGCGCAActg              <  1:317531/149‑1 (MQ=255)                                                                                                                                          ccAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACAAACGCCGACCGCTGGTCAGCAAGGCCCTGCAGCGCCTCTCGGCGCAGCGTTGGGCGCAActgc             <  4:73821/149‑1 (MQ=255)                                                                                                                                                 gcggGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACAAACGCCGACCGCTGGTCAGCAAGGCCCTGCAGCGCCTCTCGGCGCAGCGTTGGGCGCAACTGCTGCAGGa      <  6:345229‑M2/145‑1 (MQ=255)                                                                                                                                                 gcggGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACAAACGCCGACCGCTGGTCAGCAAGGCCCTGCAGCGCCTCTCGGCGCAGCGTTGGGCGCAACTGCTGCAGGa      >  4:340871‑M2/5‑149 (MQ=255)                                                                                                                                                     ggCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACAAACGCCGACCGCTGGTCAGCAAGGCCCTGCAGCGCCTCTCGGCGCAGCGTTGGGCGCAACTGCTGCAGGATGcc  <  3:311084/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                      GCCCGCTTCGATGTCTTCGGCCTGGTCGATGCCATTCTCAACGGCGAGGCTGCGCATGCCCTGCGTATGCTCGAAGGCTTGCGCGGTGAAGGTGTGGAGCCGCCAGTCATCCTCTGGGCCTTGGCCCGTGAGCTGCGCCAACTGGCGGGGCTAGCCCAGC‑AGTTCAGCCAAGGCGTGCCATTGGACAAAGCGTTCAGCCAGGCCCGCCCGCCCATCTGGGACAAACGCCGACCGCTGGTCAGCAAGGCCCTGCAGCGCCTCTCGGCGCAGCGTTGGGCGCAACTGCTGCAGGATGCC  >  NC_002947/5460212‑5460508

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.