| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 181656 | 0 (0.000) | 6 (0.210) | 6/278 | 2.7 | 100% | intergenic (+122/‑11) | PP_23SB/PP_r01 | 23S ribosomal RNA/5S ribosomal RNA |
| ? | NC_002947 | = 1330343 | NA (NA) | intergenic (+125/‑7) | PP_23SE/PP_5SE | 23S ribosomal RNA/5S ribosomal RNA | |||||
CCGTGAGGCTTGACCATATAACACCCAAGCAATTTGCTGACGCAGATTGCGGTGGTGAAGACGAAAGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/181509‑181656‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attctgTTGCCAGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCGTAGCAGATTGCTTGGGTGTTATATGGTCAAGC < NC_002947/1330343‑1330200 CCGTGAGGCTTGACCATATAACACCCAAGCAATTTGCTGACGCAGATTGCGGTGGTGAAGACGAAAGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTG > 1:21848/1‑148CCGTGAGGCTTGACCATATAACACCCAAGCAATTTGCTGACGCAGATTGCGGTGGTGAAGACGAAAGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTG < 2:106026/148‑1CCGTGAGGCTTGACCATATAACACCCAAGCAATTTGCTGACGCAGATTGCGGTGGTGAAGACGAAAGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTG > 3:66863/1‑148 CTTGACCATATAACACCCAAGCAATTTGCTGACGCAGATTGCGGTGGTGAAGACGAAAGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCTCTGGGCTGTCCATCTGGACATTCTGTTGCCAGA < 4:57139/148‑1 CCATATAACACCCAAGCAATTTGCTGACGCAGATTGCGGTGGTGAAGACGAAAGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGTTGCCAGAATGTC < 1:121508/148‑1 CCATATAACACCCAAGCAATCTGCT‑ACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGTTGCCAGAATGTCC < 3:71902/148‑1 CATATAACACCCAAGCAATCTGCT‑ACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGTTGCCAGAATGTCCA < 6:6071/148‑1 TCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGCAACAGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCGCAATCTGCG > 2:107106/1‑147 GAATTCGCTGGGCTGTCCATCTGGACATTCTGGCAACAGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCGCAATCTGCGTca < 1:107106/147‑3 ATTCTGTTGCCAGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCGTAGCAGATTGCTTGGGTGTTATATGGTCAA > 1:168520/1‑148 TCTGTTGCCAGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCGTAGCAGATTGCTTGGGTGTTATATGGTCAAGC < 8:50458/148‑1 CCGTGAGGCTTGACCATATAACACCCAAGCAATTTGCTGACGCAGATTGCGGTGGTGAAGACGAAAGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/181509‑181656‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attctgTTGCCAGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCGTAGCAGATTGCTTGGGTGTTATATGGTCAAGC < NC_002947/1330343‑1330200 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |