New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 181656	0 (0.000)	6 (0.210)	6/278	2.7	100%	intergenic (+122/‑11)	PP_23SB/PP_r01	23S ribosomal RNA/5S ribosomal RNA
	?	NC_002947	= 1330343	NA (NA)					intergenic (+125/‑7)	PP_23SE/PP_5SE	23S ribosomal RNA/5S ribosomal RNA

CCGTGAGGCTTGACCATATAACACCCAAGCAATTTGCTGACGCAGATTGCGGTGGTGAAGACGAAAGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGCAACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACC  >  NC_002947/181509‑181800                                                                                                                                                    |                                                                                                                                                 ccGTGAGGCTTGACCATATAACACCCAAGCAATTTGCTGACGCAGATTGCGGTGGTGAAGACGAAAGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTG                                                                                                                                                  >  1:21848‑M1/1‑148 (MQ=255) ccGTGAGGCTTGACCATATAACACCCAAGCAATTTGCTGACGCAGATTGCGGTGGTGAAGACGAAAGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTG                                                                                                                                                  <  2:106026‑M1/148‑1 (MQ=255) ccGTGAGGCTTGACCATATAACACCCAAGCAATTTGCTGACGCAGATTGCGGTGGTGAAGACGAAAGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTG                                                                                                                                                  >  3:66863‑M1/1‑148 (MQ=255)         cTTGACCATATAACACCCAAGCAATTTGCTGACGCAGATTGCGGTGGTGAAGACGAAAGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCTCTGGGCTGTCCATCTGGACATTCTGttgccaga                                                                                                                                          <  4:57139‑M1/148‑9 (MQ=255)              ccATATAACACCCAAGCAATTTGCTGACGCAGATTGCGGTGGTGAAGACGAAAGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGttgccagaatgtc                                                                                                                                     <  1:121508‑M1/148‑14 (MQ=255)              ccATATAACACCCAAGCAATCTGCT‑ACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGttgccagaatgtcc                                                                                                                                    <  3:71902‑M1/148‑15 (MQ=255)               cATATAACACCCAAGCAATCTGCT‑ACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGttgccagaatgtcca                                                                                                                                   <  6:6071‑M1/148‑16 (MQ=255)                                                                                                                  tCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGgcaacagaatgtccagatggacagcccagcgaattcggatatgcgatatttgcgaagctcttgtgtaaagcacgaattttcgggtctttcgtcttcaccaccgcaatctgcg                                  >  2:107106‑M1/1‑35 (MQ=255)                                                                                                                     gAATTCGCTGGGCTGTCCATCTGGACATTCTGgcaacagaatgtccagatggacagcccagcgaattcggatatgcgatatttgcgaagctcttgtgtaaagcacgaattttcgggtctttcgtcttcaccaccgcaatctgcgtca                               <  1:107106‑M1/147‑116 (MQ=255)                                                                                                                                               aTTCTGttgccagaatgtccagatggacagcccagcgaattcggatatgcgatatttgcgaagctcttgtgtaaagcacgaattttcgggtctttcgtcttcaccaccacaatctgcgtagcagattgcttgggtgttatatggtcaa    >  1:168520‑M1/1‑6 (MQ=255)                                                                                                                                                 tCTGttgccagaatgtccagatggacagcccagcgaattcggatatgcgatatttgcgaagctcttgtgtaaagcacgaattttcgggtctttcgtcttcaccaccacaatctgcgtagcagattgcttgggtgttatatggtcaagc  <  8:50458‑M1/148‑145 (MQ=255)                                                                                                                                                    |                                                                                                                                                 CCGTGAGGCTTGACCATATAACACCCAAGCAATTTGCTGACGCAGATTGCGGTGGTGAAGACGAAAGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGCAACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACC  >  NC_002947/181509‑181800

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.