| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_002947 | 3,788,572 | Δ23 bp | coding (41‑63/1392 nt) | PP_3350 ← | hypothetical protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3788571 | 2 (0.030) | 49 (0.720) | 40/284 | 0.6 | 96.1% | coding (64/1392 nt) | PP_3350 | hypothetical protein |
| ? | NC_002947 | 3788595 = | 2 (0.030) | coding (40/1392 nt) | PP_3350 | hypothetical protein | |||||
CATCGAAAGGGGCAGTGGCCTTGGCGGGGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGCCGT > NC_002947/3788460‑3788738 | tgacagccgatggtagcgcaggccatcgaaaggggcagtggccttggcggggtcgtcgagaaagcggtagtcctcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGggca > 7:73235‑M2/136‑147 (MQ=255)cATCGAAAGGGGCAGTGGCCTTGGCGGGGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCCAGCGGGCTGGCCGCGTAGGCGGAATGGCCCAGCGAAAGCCCCATGA‑GGggca > 7:64547/1‑147 (MQ=255) ccagccgatggtagcgcaggccatcgaaaggggcagtggccttggcggggtcgtcgagaaagcggtagtcctcgatccagcgaggggcccctggcctccccggccggctctcttccagcgggctggccgcgtaGCATGA‑GGggcag > 6:275767‑M2/134‑146 (MQ=255) agccgatggtagcgcaggccatcgaaaggggcagtggccttggcggggtcgtcgagaaagcggtagtcctcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGggcaggca < 3:309334‑M2/16‑1 (MQ=255) tggtagcgcaggccatcgaaaggggcagtggccttggcggggtcgtcgagaaagcggtagtcctcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGGGCAGGCATAcccc > 1:77803‑M2/126‑147 (MQ=255) agcgcaggccatcgaaaggggcagtggccttggcggggtcgtcgagaaagcggtagtcctcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGGGCAGGCATACCCCGtt > 2:319659‑M2/122‑146 (MQ=255) gcgcaggccatcgaaaggggcagtggccttggcggggtcgtcgagaaagcggtagtcctcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGGGCAGGCATACCCCGTTCa > 8:205049‑M2/121‑147 (MQ=255) gcgcaggccatcgaaaggggcagtggccttggcggggtcgtcgagaaagcggtagtcctcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGGGCAGGCATACCCCGTTCa > 7:219770‑M2/121‑147 (MQ=255) gcaggccatcgaaaggggcagtggccttggcggggtcgtcgagaaagcggtagtcctcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGGGCAGGCATACCCCGTTCAAc > 6:369624‑M2/119‑147 (MQ=255) ggccatcgaaaggggcagtggccttggcggggtagtcgagaaagcggtagtcctcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGGGCAGGCATACCCCGTTCAACGGc < 8:241525‑M2/32‑1 (MQ=255) atcgaaaggggcagtggccttggcggggtcgtcgagaaagcggtagtcctcgatcctagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTg > 1:106137‑M2/113‑147 (MQ=255) aaaggggcagtggccttggcggggtcgtcgagaaagcggtagtcctcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGatcat < 1:105496‑M2/40‑1 (MQ=255) aaggggcagtggccttggcggggtcgtcgagaaagcggtagtcctcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGatca > 1:368074‑M2/107‑145 (MQ=255) cagtggccttggcggggtcgtcgagaaagcggtagtcctcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAAtt > 4:304327‑M2/101‑147 (MQ=255) cttggcggggtcgtcgagaaagcggtagtcctcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCtt > 7:235977‑M2/94‑146 (MQ=255) cttggcggggtcgtcgagaaagcggtagtcctcgatccagcgaggggcccctggcctccccggccggctctcttcaagagggctggccgcgtaCAATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTc > 6:100422‑M2/94‑147 (MQ=255) ggggcgtcgagaaagcggtagtcctcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGtt < 8:313142‑M2/61‑1 (MQ=255) tcgagaaagcggtagtcctcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTtata > 1:180598‑M2/81‑147 (MQ=255) cgagaaagcggtagtcctcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATaa > 4:117121‑M2/80‑147 (MQ=255) gagaaagcggtagtcctcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGGGCAGGCGTACCCCGTTCAACGGCTTGATCATCAGAATTTCGCTTCACTTGTTTTTATAAt > 6:364833‑M2/79‑147 (MQ=255) gggCCCCTCGCCTCCCCGTCCGGCTCTCTTCAAGCGTGCTGTCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGC‑GGGGCAGGCATACCCCGTTCAACGGCTTGCTCATCAGAATTTCCCTTCACTTGTTTTTATAATTGtt < 8:64547/145‑1 (MQ=255) gcggtagtcctcgatccagcgagggacccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGGGCAGGCATACCCCGTTCAACGTCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCt < 4:142026‑M2/75‑1 (MQ=255) cggtagtcctcgatccagcgaggggccccttgcctccccggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCtt < 5:166991‑M2/76‑1 (MQ=255) ggtagtcctcgatccatcgaggggcccctggcctccccggccggctatcttcaagcgggctggccgcgtaACATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTa < 8:27400‑M2/77‑1 (MQ=255) cctcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACt > 4:125340‑M2/65‑147 (MQ=255) tcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTgg > 2:300266‑M2/63‑147 (MQ=255) tcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTgg < 8:219770‑M2/85‑1 (MQ=255) tcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTgg > 8:197828‑M2/63‑147 (MQ=255) tcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTgg < 2:180598‑M2/85‑1 (MQ=255) tcgatccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTGGGTTTTATAATTGTTCTTACAAACTgg > 6:348767‑M2/63‑147 (MQ=255) atccagcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGa < 2:77803‑M2/86‑1 (MQ=255) gcgaggggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAActct < 3:117121‑M2/93‑1 (MQ=255) cgaggggcccctggccaccccggccggctctcttcaagcgggctggccgcctaCCATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCGCGTCACGTGATTTTATAATTGTTCTTACAAACTGGATAACTCTg > 5:286922‑M2/54‑147 (MQ=255) gggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTaa < 3:125340‑M2/98‑1 (MQ=255) gggcccctggcctccccggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTaa < 3:285606‑M2/98‑1 (MQ=255) ggcccctggcctccccggccggctctcttcaagcgggctggcagcgtaCCATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTaa > 4:193153‑M2/49‑146 (MQ=255) ctccccggccggctctcttcaagcgggctggccgcagtaCCATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTAtttt > 1:258317‑M2/40‑147 (MQ=255) cctccccggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACaa > 3:222116‑M2/40‑119 (MQ=255) cctccccggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACaa < 4:222116‑M2/80‑1 (MQ=255) cctccccggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACaa < 4:217214‑M2/80‑1 (MQ=255) cctccccggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACaa > 3:217214‑M2/40‑119 (MQ=255) ctccccggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTAtttt < 1:183779‑M2/108‑1 (MQ=255) ccggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGt < 7:205049‑M2/111‑1 (MQ=255) cggccggctctcttcaagcgggctggccgcgtaCCATGA‑GGGGCAGGCATACGCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTaa < 1:319659‑M2/114‑1 (MQ=255) ggctctcttcaagcgggctggccgcgtaCTATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCata > 3:155806‑M2/29‑147 (MQ=255) ctctcttcaagcgggctggccgcgtaCCATGAGGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCatat > 1:258686‑M2/27‑147 (MQ=255) ttcaagcgggctggccgcgtaCCATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGcc > 6:223217‑M2/22‑146 (MQ=255) aagcgggctggccgcgtaCCATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGt < 2:368074‑M2/127‑1 (MQ=255) gcgggctggccgcgtaCCATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAAt < 3:193153‑M2/131‑1 (MQ=255) ccgcgtaCCATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGtttt < 5:369624‑M2/139‑1 (MQ=255) gtaCCATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATATCTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGTCgt < 1:300266‑M2/144‑1 (MQ=255) | CATCGAAAGGGGCAGTGGCCTTGGCGGGGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGA‑GGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGCCGT > NC_002947/3788460‑3788738 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |