New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5545321 =NA (NA)40 (0.550) 36/274 0.9 100% intergenic (‑461/+416) rpsF/rlmB 30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
?NC_002947 = 5621245 0 (0.000)coding (19/774 nt) PP_4939 hypothetical protein

CAGCGGCATGCACAGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTGGGG  >  NC_002947/5621101‑5621382
                                                                                                                                                |                                                                                                                                         
caGCGGCATGCACAGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGATGTAGCGATCGAAACTCTCAAGGGTGACTTTGAGCAGATCGATCCGCCCACAACCGGTCACGACGAGCGTGACGTCACTtc                                                                                                                                         <  7:72454‑M2/147‑3 (MQ=255)
 aGCGGCATGCACAGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtct                                                                                                                                        >  4:345070‑M2/1‑144 (MQ=255)
          cacaGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaa                                                                                                                               <  1:386916‑M2/147‑13 (MQ=255)
            caGCATCGTAGGCAGAGTCTTCGGTGATGAATACCTCGCGAATGTGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaa                                                                                                                              >  8:399388‑M2/1‑133 (MQ=255)
             aGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaa                                                                                                                             <  7:399388‑M2/146‑15 (MQ=255)
                 tcgtcgCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataac                                                                                                                       >  2:164713‑M2/1‑128 (MQ=255)
                 tcgtcgCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataa                                                                                                                        <  5:74930‑M2/147‑20 (MQ=255)
                        cggctgacatacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTcc                                                                                                                 >  6:16767‑M2/120‑147 (MQ=255)
                           agTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGTTGTCTTTGAGCAGATCGAACCGCCCACAACTCGTCACGACGAGCGTGACATCACTtatatcaaacaaaagataacacactgttct                                                                                                             <  2:166263‑M2/148‑31 (MQ=255)
                               ttCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttcttt                                                                                                           <  6:374495‑M2/146‑33 (MQ=255)
                                ctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCa                                                                                                          >  5:203023‑M2/112‑146 (MQ=255)
                                     gatgaATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcga                                                                                                    >  4:99182‑M2/1‑108 (MQ=255)
                                          aTACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaa                                                                                               >  2:386800‑M2/1‑103 (MQ=255)
                                             ccTCGCGCATGGGCGCGGTGTTGTAGCCATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACCGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaaca                                                                                            >  8:72454‑M2/1‑100 (MQ=255)
                                               ggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCtt                                                                                         <  7:237966‑M2/52‑1 (MQ=255)
                                                  gaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTcaa                                                                                      <  7:86825‑M2/55‑1 (MQ=255)
                                                    aaTGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactcttctttctagcgaaaaaaacagccgcgc                                                                                     <  4:309761‑M2/147‑55 (MQ=255)
                                                     aTGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcgg                                                                                   >  7:316887‑M2/1‑92 (MQ=255)
                                                       cttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCaacaac                                                                                  <  8:4128‑M2/59‑1 (MQ=255)
                                                              gtgtTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatgg                                                                          <  1:53086‑M2/148‑66 (MQ=255)
                                                                gttgtAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggc                                                                         <  3:215125‑M2/147‑67 (MQ=255)
                                                                    tAGCGATCGATACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggctgcga                                                                    >  1:166263‑M2/1‑77 (MQ=255)
                                                                    tAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcga                                                                    >  1:146283‑M2/1‑77 (MQ=255)
                                                                    tAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggc                                                                      >  6:74930‑M2/1‑77 (MQ=255)
                                                                     aGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggc                                                                      <  3:112060‑M2/145‑70 (MQ=255)
                                                                      atgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGt                                                                    >  6:158929‑M2/74‑146 (MQ=255)
                                                                       tgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGa                                                                  <  5:16767‑M2/75‑1 (MQ=255)
                                                                       cGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGACCCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagt                                                                 >  2:349643‑M2/1‑74 (MQ=255)
                                                                        gATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcactggcggcgaagt                                                                 <  6:371962‑M2/147‑75 (MQ=255)
                                                                              gcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGctct                                                           >  5:57776‑M2/66‑147 (MQ=255)
                                                                              aaCTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcac                                                           <  5:327281‑M2/147‑81 (MQ=255)
                                                                                ctctCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactc                                                         <  6:383412‑M2/147‑83 (MQ=255)
                                                                                agatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCtt                                                          <  6:203023‑M2/83‑1 (MQ=255)
                                                                                 tctcAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactct                                                        >  5:273688‑M2/1‑64 (MQ=255)
                                                                                 tctcAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAAATTGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgctcggggtcaatggcggcgaagtgttcactct                                                        >  3:309761‑M2/1‑64 (MQ=255)
                                                                                   tctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGtt                                                       >  2:96338‑M2/61‑146 (MQ=255)
                                                                                      aGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttcta                                                    >  4:215125‑M2/1‑59 (MQ=255)
                                                                                       acgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggttatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTa                                                     <  7:171819‑M2/88‑1 (MQ=255)
                                                                                       acgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCg                                                                                              >  7:356376‑M2/57‑103 (MQ=255)
                                                                                       acgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCg                                                                                              <  8:356376‑M2/47‑1 (MQ=255)
                                                                                       acgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATg                                                 >  7:251782‑M2/57‑148 (MQ=255)
                                                                                           catgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGccc                                              <  5:146886‑M2/95‑1 (MQ=255)
                                                                                            tCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtgg                                             >  2:386916‑M2/1‑53 (MQ=255)
                                                                                              gcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCt                                          >  7:317645‑M2/50‑148 (MQ=255)
                                                                                               cgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCtt                                         >  8:384473‑M2/49‑148 (MQ=255)
                                                                                               cgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCtt                                         >  2:112108‑M2/49‑148 (MQ=255)
                                                                                                tGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtc                                           >  7:93114‑M2/1‑49 (MQ=255)
                                                                                                 gAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcaca                                        <  3:141807‑M2/147‑100 (MQ=255)
                                                                                                 gAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcaca                                        <  3:148211‑M2/147‑100 (MQ=255)
                                                                                                  aGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcaca                                        >  4:112060‑M2/1‑47 (MQ=255)
                                                                                                    cAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagctaacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgatcactcttctatacgtggtcacag                                       <  6:179807‑M2/145‑101 (MQ=255)
                                                                                                    cAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggttacagc                                      <  1:116486‑M2/146‑102 (MQ=255)
                                                                                                       gtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACg                                   >  2:182855‑M2/41‑146 (MQ=255)
                                                                                                           gctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGcc                              <  7:384473‑M2/111‑1 (MQ=255)
                                                                                                           gctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGcc                              <  1:112108‑M2/111‑1 (MQ=255)
                                                                                                               gCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgac                         >  2:53086‑M2/1‑34 (MQ=255)
                                                                                                               gCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcac                                                           <  7:401147‑M2/114‑81 (MQ=255)
                                                                                                               gCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcac                                                           >  8:401147‑M2/1‑34 (MQ=255)
                                                                                                                gcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTg                          >  5:269274‑M2/32‑146 (MQ=255)
                                                                                                                gcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGCCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGc                         >  1:133835‑M2/32‑147 (MQ=255)
                                                                                                                 ccACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacag                       <  1:414577‑M2/148‑117 (MQ=255)
                                                                                                                   acagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCAt                      <  6:269274‑M2/119‑1 (MQ=255)
                                                                                                                    cagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTc                                        >  6:78689‑M2/28‑128 (MQ=255)
                                                                                                                    cagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTc                                        <  5:78689‑M2/101‑1 (MQ=255)
                                                                                                                      gcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGc                         >  2:246000‑M2/26‑141 (MQ=255)
                                                                                                                      gcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGc                         <  1:246000‑M2/116‑1 (MQ=255)
                                                                                                                      aCTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacaggga                    <  6:343231‑M2/146‑120 (MQ=255)
                                                                                                                       cTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggttacagcaagctgtgccgacagggatta                 >  2:116486‑M2/1‑26 (MQ=255)
                                                                                                                        gcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCATCAACCGGCTCCTGTGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCAt                      <  5:162985‑M2/119‑1 (MQ=255)
                                                                                                                        gcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATAGGCCTTCAACAACCAGCTCCAGGGCTTGAAAGATGATGTTTAGATCACCAGCTACAGCAGCAGCCGCTGCAAt                      >  6:162985‑M2/24‑142 (MQ=255)
                                                                                                                         cagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGAc                >  1:419070‑M2/23‑147 (MQ=255)
                                                                                                                                       tgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTtggg  >  6:272163‑M2/9‑147 (MQ=255)
                                                                                                                                                |                                                                                                                                         
CAGCGGCATGCACAGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTGGGG  >  NC_002947/5621101‑5621382

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.