| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 127347 = | 51 (0.800) | 3 (0.050) | 3/254 | NT | 6.1% | coding (101/288 nt) | PP_0122 | hypothetical protein |
| ? | NC_002947 | 127394 = | 44 (0.730) | coding (54/288 nt) | PP_0122 | hypothetical protein | |||||
GGGTCCGGCGCTAGAATAGCCAGAATCATTGACGACAAAGGGACTAGGTTATCATGCGCACACTCAATCGCCTGTTACTGCTCGGCCTGTTGGCAACCATGCCTGTCGTCACCCTGGCGGCGGACGACGCCCCCTCGGCCGATCCCGAGGTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/127500‑127347‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgacGACAGGCATGGTTGCCAACAGGCCGAGCAGTAACAGGCGATTGAGTGTGCGCATGATAACCTAGTCCCTTTGTCGTCAATGATTCTGGCTATTCTAGCGCCGGACCCGTCGAAAAGGTTGATTCTGCTCATGAGCCAAGCGCCCCTC > NC_002947/127394‑127540 GGGTCCGGCGCTAGAATAGCCAGAATCATTGACGACAAAGGGACTAGGTTATCATGCGCACACTCAATCGCCTGTTACTGCTCGGCCTGTTGGCAACCATGCCTGTCGTCACCCTGGCGGCGGACGACGCCCCCTCGGCCGATCCCGAG > 3:8679/1‑149 GGTCCGGCGCTAGAATAGCCAGAATCATTGACGACAAAGGGACTAGGTTATCATGCGCACACTCAATCGCCTGTTACTGCTCGGCCTGTTGGCAACCATGCCTGTCGTCACCCTGGCGGCGGACGACGCCCCCTCGGCCGATCCCGAGG < 5:348433/149‑1 GTCCGGCGCTAGAATAGCCAGAATCATTGACGACAAAGGGACTAGGTTATCATGCGCACACTCAATCGCCTGTTACTGCTCGGCCTGTTGGCAACCATGCCTGTCGTCACCCTGGCGGCGGACGACGCCCCCTCGGCCGATCCCGAGGT < 5:378884/149‑1 GTCCGGAGCTAGAATAGCCAGAATCATTGACGACAAAGGGACTAGGTTATCATGCGCACACTCAATCGCCTGTTACTGCTCGGCCTGTTGGCAACCATGCCTGTCGTCAGCCTGGCGGCGGACGACGCCCCCTCGGCCGATCCCGAGGT < 3:291889/149‑1 CGGCGCTAGAATAGCCAGAATCATTGACGACAAAGGGACTAGGTTATCATGCGCACACTCAATCGCCTGTTACTGCTCGGCCTGTTGGCAACCATGCCTGTCGTCACCCTGGCGGCGGACGACGCCCCCTCGGCCGATCCCGAGGTGA < 3:243543/148‑1 GGCGCTAGAATAGCCAGAATCATTGACGACAAAGGGACTAGGTTATCATGCGCACACTCAATCGCCTGTTACTGCTCGGCCTGTTGGCAACCATGCCTGTCGTCACCCTGGCGGCGGACGACGCCCCCTCGGCCGATCCCGAGGTGAC > 7:175695/1‑148 CTGTCGTCACCCTGGCGGCGGACGACGCCCCCTCGCCCGATCCCGAGGTGACGACACGCATGGTTGCCAACAGGCCGAGCAGTAACAGCCGATTGAGTGAGCGCATGATATCCTAATCCCTTTGTCGTCAATGATTCTGGCTATACTAG > 1:168782/1‑149 TCGTCACCCTGGCGGCGGACGACGCCCCCTCGGCCGATCCCGAGGTGACGACAGGCATGGTTGCCAACAGGCCGAGCAGTAACAGGCGATTGAGTGTGCGCATGATAACCTAGTC > 5:15145/1‑115 TCGTCACCCTGGCGGCGGACGACGCCCCCTCGGCCGATCCCGAGGTGACGACAGGCATGGTTGCCAACAGGCCGAGCAGTAACAGGCGATTGAGTGTGCGCATGATAACCTAGTC < 6:15145/115‑1 ACGACAGGCATGGTTGCCAACAGGCCGAGCAGTAACAGGCGATTGAGTGTGCGCATGATAACCTAGTCCCTTTGTCGTCAATGATTCTGGCTATTCTAGCGCCGGACCCGTCGAAAAGGTTGATTCTGCTCATGAGCCAAGCGCCCCTC < 6:174345/149‑1 GGGTCCGGCGCTAGAATAGCCAGAATCATTGACGACAAAGGGACTAGGTTATCATGCGCACACTCAATCGCCTGTTACTGCTCGGCCTGTTGGCAACCATGCCTGTCGTCACCCTGGCGGCGGACGACGCCCCCTCGGCCGATCCCGAGGTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/127500‑127347‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgacGACAGGCATGGTTGCCAACAGGCCGAGCAGTAACAGGCGATTGAGTGTGCGCATGATAACCTAGTCCCTTTGTCGTCAATGATTCTGGCTATTCTAGCGCCGGACCCGTCGAAAAGGTTGATTCTGCTCATGAGCCAAGCGCCCCTC > NC_002947/127394‑127540 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |