| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 132201 = | 82 (1.290) | 4 (0.070) | 4/252 | NT | 5.3% | coding (393/618 nt) | cc | cytochrome c4 |
| ? | NC_002947 | 132256 = | 66 (1.100) | coding (448/618 nt) | cc | cytochrome c4 | |||||
GAAGCCGGCCAGGGCGATGCCCGCGCCGTTGGGCGAGTGGCAGCCAGTGCAGGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/132258‑132201‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccggcTTCCCGCACCTGGGCGGGCAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGCAAGCTGAGCAACCATGACATCGAAGCGTTGGC > NC_002947/132256‑132401 GAAGCCGGCCAGGGCGATGCCCGCGCCGTTGGGCGAGTGGCAGCCAGTGCAGGCCGGCTTCCCGCACCTGGGCGGGCAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATG > 5:233541/1‑146GAAGCCGGCCAGGGCGATGCCCGCGCCGTTGGGCGAGTGGCAGCCAGTGCAGGCCGGCTTCCCGCACCTGGGCGGGCAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATG < 6:233541/146‑1 AAGCCGGCCAGGGCGATGCCCGCGCCGTTGGGCGAGTGGCAGCCAGTGCAGGCCGGCTTCCCGCACCTGGGCGGGCAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCAGCGAAGGCAACCGCACCAACGATGGCGATGCCAT > 4:233240/1‑149 CCGGCCAGGGCGATGCCCGCGCCGTTGGGCGAGTGGCAGCCAGTGCAGGCCGGCTTCCCGCACCTGGGCGGGCAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATGCCATGAC > 1:49973/1‑149 CCGGCTTCCCGCACCTGGGCGGGCAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGCAAGCTGAGCAACCATGACATCGAAGCGTTG < 1:355679/149‑1 CCGGCTTCCCGCACCTGGGCGGGCAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGCAAGCTGAGCAACCATGACATCGAAGCGTTG < 1:57729/149‑1 CCGGCTTCCCGCACCTGGGCGGGCAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGCAAGCTGAGCAACCATGACATCGAAGCGTTG < 3:356963/149‑1 CGGCTTCCCGCACCTGGGCGGGCAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGCAAGCTGAGCAACCATGACATCGAAGCGTTGG > 1:290780/1‑149 GGCTTCCCGCACCTTGGCTGGCAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAAGCGCACCAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGCAAGCTGAGCAACCATGACATCGAAGCGTTGGC < 5:110181/149‑1 GCTTCCCGCACCTGGGCGGGCAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGCCAGCTGAGCAACCATGACATCGAAGCGTTGGC > 8:145192/1‑148 GAAGCCGGCCAGGGCGATGCCCGCGCCGTTGGGCGAGTGGCAGCCAGTGCAGGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/132258‑132201‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccggcTTCCCGCACCTGGGCGGGCAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGCAAGCTGAGCAACCATGACATCGAAGCGTTGGC > NC_002947/132256‑132401 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |