New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 132201 =82 (1.290)4 (0.070) 4/252 NT 5.3% coding (393/618 nt) cc cytochrome c4
?NC_002947 132256 = 66 (1.100)coding (448/618 nt) cc cytochrome c4

TCCAGCCAAAAAGGCAGCGTGGGGGCCGCCGATCCCAAGCTGGTCGAGCGCGGCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGCAAGCTGAGCAACCATGACATCGAAGCGTTGGC  >  NC_002947/132109‑132401
                                                                                                                                                    |                                                                                                                                                    
tcCAGCCAAAAAGGCAGCGTGGGGGCCGCCGATCCCAAGCTGGTCGAGCGCGGCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCtt                                                                                                                                                     >  4:247179/1‑149 (MQ=255)
atggcatcgccatcgttggtgcggttgccttcgctgaagtcagtgagctgcttggccacgtactgcgagtgttgcccgcccaggtgcgggaaGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCtt                                                                                                                                                     >  4:233240‑M1/93‑149 (MQ=255)
   aGCCAAAAAGGCAGCGTGGGGGCCGCCGATCCCAAGCTGGTCGAGCGCGGCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTccc                                                                                                                                                  >  4:267702/1‑149 (MQ=255)
    gCCAAAAAGGCAGCGTGGGGGCCGCCGATCCCAAGCTGGTCGAGCGCGGCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTc                                                                                                                                                    >  3:208662/1‑146 (MQ=255)
    gCCAAAAAGGCAGCGTGGGGGCCGCCGATCCCAAGCTGGTCGAGCGCGGCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTc                                                                                                                                                    <  4:208662/146‑1 (MQ=255)
    catcgccatcgttggtgcggttgccttcgcggaagtcagtgagctgcttggccacgtactgcgagtgttgcccgcccaggtgcgggaaGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTc                                                                                                                                                    <  6:233541‑M1/58‑1 (MQ=255)
    catcgccatcgttggtgcggttgccttcgcggaagtcagtgagctgcttggccacgtactgcgagtgttgcccgcccaggtgcgggaaGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTc                                                                                                                                                    >  5:233541‑M1/89‑146 (MQ=255)
     ccAAAAAGGCAGCGTGGGGGCCGCCGATCCCAAGCTGGTCGAGCGCGGCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCg                                                                                                                                                 >  8:46299/1‑148 (MQ=255)
     ccAAAAAGGCAGCGTGGGGGCCGCCGATCCCAAGCTGGTCGAGCGCGGCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGc                                                                                                                                                <  7:46299/149‑1 (MQ=255)
     ccAAAAAGGCAGCGTGGGGGCCGCCGATCCCAAGCTGGTCGAGCGCGGCCGCGCGTTGTTCAAAGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCCCTCGCCCAACGGCGCCGGCATCGCCCTGGCCGGCTTCCCGc                                                                                                                                                >  8:51973/1‑149 (MQ=255)
     ccAAAAAGGCAGCGTGGGGGCCGCCGATCCCAAGCTGGTCGAGCCCGGCCGCGCGTTGTTAAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACAGGCTGCCACACGCCCAAAGCCGCCGGCATCGCCCTGGCCCGCTTCCCGc                                                                                                                                                >  8:45772/1‑149 (MQ=255)
      cAAAAAGGCAGCGTGGGGGCCGCCGATCCCAAGCTGGTCGAGCGCGGCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCa                                                                                                                                               >  1:48067/1‑149 (MQ=255)
      cAAAAAGGCAGCGTGGGGGCCGCCGATCCCAAGCTGGTCGAGCGCGGCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCa                                                                                                                                               <  3:109326/149‑1 (MQ=255)
        aaaaGGCAGCGTGGGGGCCGCCGATCCCAAGCTGGTCGAGCGCGGCCGCGCGTTGTTCAAATGCGGCGACCTGGAAAAGCGCATGCCGGCCTCGACTGGCTGCCAATCGCCCAACTGCGCGCGCATCTCCCTGGCAGGCTTCCCGCAcc                                                                                                                                             >  3:282697/1‑149 (MQ=255)
                gCGTGGGGGCCGCCGATCCCAAGCTGGTCGAGCGCGGCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTgggcggg                                                                                                                                    <  4:371191/149‑1 (MQ=255)
                gCGTGGGGGCCGCCGATCCCAAGCTGGTCGAGCGCGGCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTgggcggg                                                                                                                                    <  6:387935/149‑1 (MQ=255)
                gCGTGGGGGCCGCCGATCCCAAGCTGGTCGAGCGCGGCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTgggcggg                                                                                                                                    >  3:112882/1‑149 (MQ=255)
                 cGTGGGGGCCGCCGATCCCAAGCTGGTCGAGCGCGGCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTgggcggg‑‑c                                                                                                                                 <  8:165014/149‑1 (MQ=255)
                 cGTGGGGGCCGCCGATCCCAAGCTGGTCGAGCGCGGCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTgggcggg‑‑c                                                                                                                                 <  5:384193/149‑1 (MQ=255)
                 cGTGGGGGCCGCCGATCCCAAGCTGGTCGAGCGCGGCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTgggcggg                                                                                                                                    >  6:212633/1‑148 (MQ=255)
                   tGGGGGCCGCCGATCCCAAGCTGGTCGAGCGCGGCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑Caa                                                                                                                               <  5:212633/149‑1 (MQ=255)
                      gggCCGCCGATCCCAAGCTGGTCGAGCGCGGCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAacac                                                                                                                            <  5:275246/149‑1 (MQ=255)
                       ggCCGCCGATCCCAAGCTGGTCGAGCGCGGCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CCACACt                                                                                                                           >  4:44857/1‑149 (MQ=255)
                           gccgATCCCAAGCTGGTCGAGCGCGGCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCg                                                                                                                         >  5:163630/1‑147 (MQ=255)
                              gATCCCAAGCTGGTCGAGCGCGGCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCCCCTGGGCGGG‑‑CAACACTCGCAGTa                                                                                                                    >  4:161092/1‑149 (MQ=255)
                               aTCCCAAGCTGGTCGAGCGCGGCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTAc                                                                                                                   <  3:130784/149‑1 (MQ=255)
                                  ccAAGCTGGTCGAGCGCGGCCGGGCGTTGTTCAATGGCGGCGACCTGGAAAACGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCACTACGTg                                                                                                                >  6:110181/1‑149 (MQ=255)
                                   cAAGCTGGTCGCGCGCGGCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTgg                                                                                                               >  5:208423/1‑149 (MQ=255)
                                   cAAGCTGGTCGAGCGCGGCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTgg                                                                                                               <  2:48067/149‑1 (MQ=255)
                                   cAAGCTGGTCGAGCGCGGCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTgg                                                                                                               <  5:115190/149‑1 (MQ=255)
                                    aaGCTGGTCGAGCGCGGCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGc                                                                                                              >  5:171658/1‑149 (MQ=255)
                                          gTCGAGCGCGGCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAagc                                                                                                         <  4:195464/148‑1 (MQ=255)
                                          gTCGAGCGCGGCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAag                                                                                                          <  7:53321/147‑1 (MQ=255)
                                             gAGCGCGGCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAagcagc                                                                                                      <  5:151870/148‑1 (MQ=255)
                                             gAGCGCGGCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCt                                                                                                     >  2:57729/1‑149 (MQ=255)
                                             gAGCGCGGCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCt                                                                                                     <  3:153653/149‑1 (MQ=255)
                                              aGCGCGGCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGACCTGCACTGGCTGCCACTCGCCCAACGGCCCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCACCt                                                                                                     >  1:295272/1‑149 (MQ=255)
                                               gcgcGGCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCa                                                                                                   >  5:273083/1‑149 (MQ=255)
                                                 gcgGCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACt                                                                                                 <  5:100322/149‑1 (MQ=255)
                                                 gcgGCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACt                                                                                                 <  6:163630/149‑1 (MQ=255)
                                                   ggCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGa                                                                                               <  6:273083/149‑1 (MQ=255)
                                                     ccGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACt                                                                                             >  5:150431/1‑149 (MQ=255)
                                                       gcgcgTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTc                                                                                           >  1:372517/1‑149 (MQ=255)
                                                        cgcgTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTcc                                                                                          <  3:247179/149‑1 (MQ=255)
                                                        cgcgTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTcc                                                                                          <  2:295272/149‑1 (MQ=255)
                                                         gcgTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCcg                                                                                         >  7:251005/1‑149 (MQ=255)
                                                          cgTTGTTCAATGGCGGCGACCTGGAAACGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCcgc                                                                                        <  7:45772/149‑1 (MQ=255)
                                                          cgTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCcgc                                                                                        <  7:51973/149‑1 (MQ=255)
                                                               ttCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAg                                                                                    <  8:86217/148‑1 (MQ=255)
                                                                       cggcgACCTGGAAAAGGGCATGGCGGCCTGCACTGGCTGCCACTCGGCCAACGGCGCGGGGATCGCCCTGGCCGGGTTCCCGGACGTGGGCGGG‑‑CATCACTCGCAGTACGTGGCGAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCa                                                                           <  4:282697/149‑1 (MQ=255)
                                                                                 gAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGAt                                                                   <  6:208423/147‑1 (MQ=255)
                                                                                 gAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATgg                                                                 >  8:83648/1‑149 (MQ=255)
                                                                                 gAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATgg                                                                 <  1:48884/149‑1 (MQ=255)
                                                                                 gAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATgg                                                                 >  8:281530/1‑149 (MQ=255)
                                                                                    aaGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGa                                                              <  4:112882/149‑1 (MQ=255)
                                                                                        gCATGCGGGCGTGCACTGGTTGCAAATGGCCCAACGGGTGGGTGATGGCCCTGGCCGGCTTCCGGCACATGGGGGGGAACTCCACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGAt                                                             <  1:117374/148‑1 (MQ=255)
                                                                                          gaagccggccagggcgatgcccgcgccgttgggcgagtggcagccagtgcaggccggcTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATg                                                            <  6:233541‑M2/88‑1 (MQ=255)
                                                                                          gaagccggccagggcgatgcccgcgccgttgggcgagtggcagccagtgcaggccggcTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATg                                                            >  5:233541‑M2/59‑146 (MQ=255)
                                                                                           aagccggccagggcgatgcccgcgccgttgggcgagtggcagccagtgcaggccggcTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCAGCGAAGGCAACCGCACCAACGATGGCGATGCCAt                                                        >  4:233240‑M2/58‑149 (MQ=255)
                                                                                              ccggccagggcgatgcccgcgccgttgggcgagtggcagccagtgcaggccggcTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATGCCATGAc                                                     >  1:49973‑M2/55‑149 (MQ=255)
                                                                                                      cACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATGCCATGACCATGCGCa                                             >  4:47440/1‑149 (MQ=255)
                                                                                                         tGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATGCCATGACCATGCGCACCa                                          >  6:355495/1‑149 (MQ=255)
                                                                                                             tGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAagca                                                                                                        >  4:385384/1‑83 (MQ=255)
                                                                                                             tGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAagca                                                                                                        <  3:385384/83‑1 (MQ=255)
                                                                                                             tGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATGCCATGACCATGCGCACCATCGc                                      >  5:59266/1‑149 (MQ=255)
                                                                                                               ccACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATGCCATGACCATGCGCACCATCGCTg                                    <  6:150431/149‑1 (MQ=255)
                                                                                                                  cacGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGAGGG‑‑CAACACTCCCAGTACGTGGCCAAGCAGCTCACAGAATACCCCGAAGGCAACCGCACCAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGc                                  >  6:5914/3‑148 (MQ=255)
                                                                                                                   tCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGc                                  >  1:81016/1‑148 (MQ=255)
                                                                                                                   tCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGc                                  >  4:230719/1‑147 (MQ=255)
                                                                                                                   tCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGc                                  >  3:63835/1‑147 (MQ=255)
                                                                                                                     gCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGCAAGc                              <  4:179631/149‑1 (MQ=255)
                                                                                                                       ccAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGCAAGCt                             >  4:112657/1‑148 (MQ=255)
                                                                                                                       ccAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGCAAGCTg                            >  3:43884/1‑149 (MQ=255)
                                                                                                                        cAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGCAAGCTGa                           <  3:161092/149‑1 (MQ=255)
                                                                                                                        cAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGCAAGCTGa                           <  3:112657/149‑1 (MQ=255)
                                                                                                                              cgcgGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGCAAGCTGAGCAAcc                     <  5:382351/149‑1 (MQ=255)
                                                                                                                                     aTCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGCAAGCTGAGCAACCATGACAt              <  8:251005/149‑1 (MQ=255)
                                                                                                                                          ccTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTGACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATGCCATGAGCATGCGCACCATCGCTGGCAAGCTGAGCAACCATGCCAGCGAAg         >  3:101393/1‑149 (MQ=255)
                                                                                                                                          ccTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGCAAGCTGAGCAACCATGACATCGAAg         >  4:299259/1‑149 (MQ=255)
                                                                                                                                           cTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGCAAGCTGAGCAACCATGACATCGAAGc        >  2:111966/1‑149 (MQ=255)
                                                                                                                                               ccggcTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGCAAGCTGAGCAACCATGACATCGAAGCGTTg    <  1:57729‑M2/144‑1 (MQ=255)
                                                                                                                                               ccggcTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGCAAGCTGAGCAACCATGACATCGAAGCGTTg    <  1:355679‑M2/144‑1 (MQ=255)
                                                                                                                                               ccggcTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGCAAGCTGAGCAACCATGACATCGAAGCGTTg    <  3:356963‑M2/144‑1 (MQ=255)
                                                                                                                                                cggcTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGCAAGCTGAGCAACCATGACATCGAAGCGTTgg   >  1:290780‑M2/5‑149 (MQ=255)
                                                                                                                                                 ggcTTCCCGCACCTTGGCTGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAAGCGCACCAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGCAAGCTGAGCAACCATGACATCGAAGCGTTGGc  <  5:110181‑M2/146‑1 (MQ=255)
                                                                                                                                                  gcTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGCCAGCTGAGCAACCATGACATCGAAGCGTTGGc  >  8:145192‑M2/3‑148 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
TCCAGCCAAAAAGGCAGCGTGGGGGCCGCCGATCCCAAGCTGGTCGAGCGCGGCCGCGCGTTGTTCAATGGCGGCGACCTGGAAAAGGGCATGCCGGCCTGCACTGGCTGCCACTCGCCCAACGGCGCGGGCATCGCCCTGGCCGGCTTCCCGCACCTGGGCGGG‑‑CAACACTCGCAGTACGTGGCCAAGCAGCTCACTGACTTCCGCGAAGGCAACCGCACCAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGCAAGCTGAGCAACCATGACATCGAAGCGTTGGC  >  NC_002947/132109‑132401

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.