New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 674337 = | 51 (0.800) | 3 (0.050) | 3/248 | NT | 6.3% | intergenic (‑229/+77) | PP_0575/PP_0576 | membrane protein/lipoprotein |
? | NC_002947 | 674395 = | 42 (0.710) | intergenic (‑287/+19) | PP_0575/PP_0576 | membrane protein/lipoprotein |
CGGAAGAACGCAACAGCGCAATCCGCAATACCGTGGCCAAGGTGCTGGGCAACTACCCACCGGGCAGCAAAAAATAGCGTTGGAACGCGGCTTTTGCATGCACCGTGGCCCGGCGGGAGCGGGTTTACCCGCGAAGCAATTGGCCCGGTGCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/674490‑674337 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtgcatgCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGTTGCGTTCTTCCGGGCTTGGCGGGTAGTTGTTCATGATCTGCTCGGCACTGCCGCGCCATAC > NC_002947/674395‑674539 CGGAAGAACGCAACAGCGCAATCCGCAATACCGTGGCCAAGGTGCTGGGCAACTACCCACCGGGCAGCAAAAAATAGCGTTGGAACGCGGCTTTTGCATGCACCGTGGCCCGGCGGGAGCGGGTTTACCCGCGAAGCAATTGGCCCGGT < 2:302686/149‑1 GAACGCAACAGCGCAATCCGCAATACCGTGGCCAAGGTGCTGGGCAACTACCCACCGGGCAGCAAAAAATAGCGTTGGAACGCGGCTTTTGCATGCACCGTGGCCCGGCGGGAGCGGGTTTACCCGCGAAGCAATTGGCCCGGTGCATG > 5:75451/1‑149 CATGCACCGTGGCCCGGCGGGAGCGGGTTTACCCGCGAAGCAATTGGCCCGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCA < 3:228029/121‑1 CATGCACCGTGGCCCGGCGGGAGCGGGTTTACCCGCGAAGCAATTGGCCCGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCA > 4:228029/1‑121 ACCGTGGCCCGGCGGGAGCGGGTTTACCCGCGAAGCAATTGGCCCGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGTTGCGTTCTTCag > 8:284433/1‑147 CGGTGCATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGTGGCGTTCTTCCGGGCTTGGCGGGTAGTTGTTCATGATCTGCTCGGCACTGCCGCGC < 5:296605/149‑1 CATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGTTGCGTTCTTCCGGGCTTGGCGGGTAGTTGTTCATGATCTGCTCGGCACTGCCGCGCCATAC < 1:160502/149‑1 CATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGTTGCGTTCTTCCGGGCTTGGCGGGTAGTTGTTCATGATCTGCTC < 7:130744/131‑1 CATGCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGTTGCGTTCTTCCGGGCTTGGCGGGTAGTTGTTCATGATCTGCTC > 8:130744/1‑131 CGGAAGAACGCAACAGCGCAATCCGCAATACCGTGGCCAAGGTGCTGGGCAACTACCCACCGGGCAGCAAAAAATAGCGTTGGAACGCGGCTTTTGCATGCACCGTGGCCCGGCGGGAGCGGGTTTACCCGCGAAGCAATTGGCCCGGTGCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/674490‑674337 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtgcatgCAAAAGCCGCGTTCCAACGCTATTTTTTGCTGCCCGGTGGGTAGTTGCCCAGCACCTTGGCCACGGTATTGCGGATTGCGCTGTTGCGTTCTTCCGGGCTTGGCGGGTAGTTGTTCATGATCTGCTCGGCACTGCCGCGCCATAC > NC_002947/674395‑674539 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |