New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1028604 = | 65 (1.020) | 4 (0.070) | 4/254 | NT | 6.2% | coding (136/1626 nt) | dppA‑III | dipeptide ABC transporter substrate‑binding protein |
? | NC_002947 | 1028658 = | 59 (0.970) | coding (82/1626 nt) | dppA‑III | dipeptide ABC transporter substrate‑binding protein |
GACAACAATGAGGCCACCATGCTCAAACACGCAGTCATTCCGTTCCTGCTGGGTGCAGGCTTGCTCAGCGGCGCACCGTCGGCCGTTGCCGCATCCAACCTGGTGTTCTGCTCCGAAGGCAGCCCGGCCGGCTTCGATCCGGGGCAGTACACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1028757‑1028604 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acaccaGGTTGGATGCGGCAACGGCCGACGGTGCGCCGCTGAGCAAGCCTGCACCCAGCAGGAACGGAATGACTGCGTGTTTGAGCATGGTGGCCTCATTGTTGTCATTTTTTGGATGAGGTGGCCTCGTGAGCCGACCTGCGGATACTTAT > NC_002947/1028658‑1028803 GACAACAATGAGGCCACCATGCTCAAACACGCAGTCATTCCGTTCCTGCTGGGTGCAGGCTTGCTCAGCGGCGCACCGTCGGCCGTTGCCGCATCCAACCTGGTGTTCTGCTCCGAAGGCAGCCCGGCCGGCTTCGATCCCGGGCAGTA > 5:309082/1‑149 ACAACAATGAGGCCACCATGCTCAAACACGCAGTCATTCCGTTCCTGCTGGGTGCAGGCTTGCTCAGCGGCGCACCGTCGGCCGTTGCCGCATCCAACCTGGTGTTCTGCTCCGAAGGCAGCCCGGCCGGCTTCGATCCGGGGCAGTA < 1:6580/148‑1 ACAACAATGAGGCCACCATGCTCAAACACGCAGTCATTCCGTTCCTGCTGGGTGCAGGCTTGCTCAGCGGCGCACCGTCGGCCGTTGCCGCATCCAACCTGGTGTTCTGCTCCGAAGGCAGCCCGGCCGGCTTCGATCCGGGGCAGTA < 7:283838/148‑1 AACAATGAGGCCACCATGCTCAAACTCGCAGTCATTCCGTTCCTGCTGGGTGCAGGCTTGCTCAGCGGCGCACCGTCGGCCGTTGCCGCATCCAACCTGGTGTTCTGCTCCGAAGGCAGCACGGCCGGCTTCGATCCGGGGCAGTACAC > 7:114089/1‑149 AACAATGAGGCCACCATGCTCAAACACGCAGTCATTCCGTTCCTGCTGGGTGCAGGCTTGATCAGCGGCGCACCGTCGGCCGTTGACGCATCCAACCTGGTGTTCTGCTCAGAAGGCAGCCCGGCCGGCATCGATCCCGGGCACTACAC > 8:206462/1‑149 CTGGTGTTCTGCTCCGAAGGCAGCCCGGCCGGCTTCGATCCGGGGCAGTACACCAGGTTGGATGCGGCAACGGCCGACGGTGCGCCGCTGAGCAAGCCTGCACCCAGCAGGAACGGAATGACTGCGTGTTTGAG > 3:277177/1‑134 CTGGTGTTCTGCTCCGAAGGCAGCCCGGCCGGCTTCGATCCGGGGCAGTACACCAGGTTGGATGCGGCAACGGCCGACGGTGCGCCGCTGAGCAAGCCTGCACCCAGCAGGAACGGAATGACTGCGTGTTTGAG < 4:277177/134‑1 CCGAAGGCAGCCCGGCCGGCTTCGATCCGGGGCAGTACACCAGGTTGGATGCGGCAACGGCCGACGGTGCGCCGCTGAGCAAGCCTGCACCCAGCA > 1:252648/1‑96 CCGAAGGCAGCCCGGCCGGCTTCGATCCGGGGCAGTACACCAGGTTGGATGCGGCAACGGCCGACGGTGCGCCGCTGAGCAAGCCTGCACCCAGCA < 2:252648/96‑1 ACCAGGTTGGATGCGGCAACGGCCGACGGTGCGCCGCTGAGCAAGCCTGCACCCAGCAGGAACGGAATGACTGCGTGTTTGAGCATGGTGGCCTCATTGTTGTCATTTTTTGGATGAGGTGGCCTCGTGAGCCGACCTGCGGATACTTA > 3:266726/1‑149 CCAGGTTGGATGCGGCAACGGCCGACGGTGCGCCGCTGAGCAAGCCTGCACCCAGCAGGAACGGAATGACTGCGTGTTTGAGCATGGTGGCCTCATTGTTGTCATTTTTTGGATGAGGTGGCCTCGTGAGCCGACCTGCGGATACTTAT > 7:263530/1‑149 GACAACAATGAGGCCACCATGCTCAAACACGCAGTCATTCCGTTCCTGCTGGGTGCAGGCTTGCTCAGCGGCGCACCGTCGGCCGTTGCCGCATCCAACCTGGTGTTCTGCTCCGAAGGCAGCCCGGCCGGCTTCGATCCGGGGCAGTACACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1028757‑1028604 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acaccaGGTTGGATGCGGCAACGGCCGACGGTGCGCCGCTGAGCAAGCCTGCACCCAGCAGGAACGGAATGACTGCGTGTTTGAGCATGGTGGCCTCATTGTTGTCATTTTTTGGATGAGGTGGCCTCGTGAGCCGACCTGCGGATACTTAT > NC_002947/1028658‑1028803 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |