| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1028604 = | 65 (1.020) | 4 (0.070) | 4/254 | NT | 6.2% | coding (136/1626 nt) | dppA‑III | dipeptide ABC transporter substrate‑binding protein |
| ? | NC_002947 | 1028658 = | 59 (0.970) | coding (82/1626 nt) | dppA‑III | dipeptide ABC transporter substrate‑binding protein | |||||
GACAACAATGAGGCCACCATGCTCAAACACGCAGTCATTCCGTTCCTGCTGGGTGCAGGCTTGCTCAGCGGCGCACCGTCGGCCGTTGCCGCATCCAACCTGGTGTTCTGCTCCGAAGGCAGCCCGGCCGGCTTCGATCCGGGGCAGTACACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1028757‑1028604‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acaccaGGTTGGATGCGGCAACGGCCGACGGTGCGCCGCTGAGCAAGCCTGCACCCAGCAGGAACGGAATGACTGCGTGTTTGAGCATGGTGGCCTCATTGTTGTCATTTTTTGGATGAGGTGGCCTCGTGAGCCGACCTGCGGATACTTAT > NC_002947/1028658‑1028803 GACAACAATGAGGCCACCATGCTCAAACACGCAGTCATTCCGTTCCTGCTGGGTGCAGGCTTGCTCAGCGGCGCACCGTCGGCCGTTGCCGCATCCAACCTGGTGTTCTGCTCCGAAGGCAGCCCGGCCGGCTTCGATCCCGGGCAGTA > 5:309082/1‑149 ACAACAATGAGGCCACCATGCTCAAACACGCAGTCATTCCGTTCCTGCTGGGTGCAGGCTTGCTCAGCGGCGCACCGTCGGCCGTTGCCGCATCCAACCTGGTGTTCTGCTCCGAAGGCAGCCCGGCCGGCTTCGATCCGGGGCAGTA < 1:6580/148‑1 ACAACAATGAGGCCACCATGCTCAAACACGCAGTCATTCCGTTCCTGCTGGGTGCAGGCTTGCTCAGCGGCGCACCGTCGGCCGTTGCCGCATCCAACCTGGTGTTCTGCTCCGAAGGCAGCCCGGCCGGCTTCGATCCGGGGCAGTA < 7:283838/148‑1 AACAATGAGGCCACCATGCTCAAACTCGCAGTCATTCCGTTCCTGCTGGGTGCAGGCTTGCTCAGCGGCGCACCGTCGGCCGTTGCCGCATCCAACCTGGTGTTCTGCTCCGAAGGCAGCACGGCCGGCTTCGATCCGGGGCAGTACAC > 7:114089/1‑149 AACAATGAGGCCACCATGCTCAAACACGCAGTCATTCCGTTCCTGCTGGGTGCAGGCTTGATCAGCGGCGCACCGTCGGCCGTTGACGCATCCAACCTGGTGTTCTGCTCAGAAGGCAGCCCGGCCGGCATCGATCCCGGGCACTACAC > 8:206462/1‑149 CTGGTGTTCTGCTCCGAAGGCAGCCCGGCCGGCTTCGATCCGGGGCAGTACACCAGGTTGGATGCGGCAACGGCCGACGGTGCGCCGCTGAGCAAGCCTGCACCCAGCAGGAACGGAATGACTGCGTGTTTGAG > 3:277177/1‑134 CTGGTGTTCTGCTCCGAAGGCAGCCCGGCCGGCTTCGATCCGGGGCAGTACACCAGGTTGGATGCGGCAACGGCCGACGGTGCGCCGCTGAGCAAGCCTGCACCCAGCAGGAACGGAATGACTGCGTGTTTGAG < 4:277177/134‑1 CCGAAGGCAGCCCGGCCGGCTTCGATCCGGGGCAGTACACCAGGTTGGATGCGGCAACGGCCGACGGTGCGCCGCTGAGCAAGCCTGCACCCAGCA > 1:252648/1‑96 CCGAAGGCAGCCCGGCCGGCTTCGATCCGGGGCAGTACACCAGGTTGGATGCGGCAACGGCCGACGGTGCGCCGCTGAGCAAGCCTGCACCCAGCA < 2:252648/96‑1 ACCAGGTTGGATGCGGCAACGGCCGACGGTGCGCCGCTGAGCAAGCCTGCACCCAGCAGGAACGGAATGACTGCGTGTTTGAGCATGGTGGCCTCATTGTTGTCATTTTTTGGATGAGGTGGCCTCGTGAGCCGACCTGCGGATACTTA > 3:266726/1‑149 CCAGGTTGGATGCGGCAACGGCCGACGGTGCGCCGCTGAGCAAGCCTGCACCCAGCAGGAACGGAATGACTGCGTGTTTGAGCATGGTGGCCTCATTGTTGTCATTTTTTGGATGAGGTGGCCTCGTGAGCCGACCTGCGGATACTTAT > 7:263530/1‑149 GACAACAATGAGGCCACCATGCTCAAACACGCAGTCATTCCGTTCCTGCTGGGTGCAGGCTTGCTCAGCGGCGCACCGTCGGCCGTTGCCGCATCCAACCTGGTGTTCTGCTCCGAAGGCAGCCCGGCCGGCTTCGATCCGGGGCAGTACACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1028757‑1028604‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acaccaGGTTGGATGCGGCAACGGCCGACGGTGCGCCGCTGAGCAAGCCTGCACCCAGCAGGAACGGAATGACTGCGTGTTTGAGCATGGTGGCCTCATTGTTGTCATTTTTTGGATGAGGTGGCCTCGTGAGCCGACCTGCGGATACTTAT > NC_002947/1028658‑1028803 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |