| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1874006 = | 61 (0.960) | 3 (0.050) | 3/254 | NT | 5.4% | coding (317/1056 nt) | cobU | nicotinate‑nucleotide‑‑dimethylbenzimidazole phosphoribosyltransferase |
| ? | NC_002947 | 1874081 = | 47 (0.770) | coding (392/1056 nt) | cobU | nicotinate‑nucleotide‑‑dimethylbenzimidazole phosphoribosyltransferase | |||||
TCGCGACCAGCCTGCAAGGCCGCTTGCAGCTGGTTTTCGGTCATCGCAGGTTGACGGGCAAAGTTGGCAGTACCGGTGCCCAGCCGCAGATGGCGCACGCCGGGCAGTTCCAGCTGCGCGTCAATGGTGCCCAGGTCGACCACGTCCAGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1874159‑1874006‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctggGCACCGGTACTGCCAACTTTGCCCGTCAACCTGCGATGACCGAAAACCAGCTGCAAGCGGCCTTGCAGGC > NC_002947/1874081‑1874150 TCGCGACCAGCCTGCAAGGCCGCTTGCAGCTGGTTTTCGGTCATCGCAGGTTGACGGGCAAAGTTGGCAGTACCGGTGCCCAGCCGCAGATGGCGCACGCCGGGCAGTTCCAGCTGCGCGTCAATGGTGCCCAGGTCGACCACGTCCAG > 6:219638/1‑149TCGCGACCAGCCTGCAAGGCCGCTTGCAGCTGGTTTTCGGTCATCGCAGGTTGACGGGCAAAGTTGGCAGTACCGGTGCCCAGCCGCAGATGGCGCACGCCGGGCAGTTCCAGCTGCGCGTCAATGGTGCCCAGGTCGACCACGTCCAG > 7:309572/1‑149 GCGACCAGCCTGCAAGGCCGCTTGCAGCTGGTTTTCGGTCATCGCAGGTTGACGGGCAAAGTTGGCAGTACCGGTGCCCAGCCGCAGATGGCGCACGCCGGGCAGTTCCAGCTGCGCGTCAATGGTGCCCAGGTCGACCACGTCCAGGC > 3:222992/1‑149 CGACCAGCCTGCAAGGCCGCTTGCAGCTGGTTTTCGGTCATCGCAGGTTGACGGGCAAAGTTGGCAGTACCGGTGCCCAGCCGCAGATGGCGCACGCCGGGCAGTTCCAGCTGCGCGTCAATGGTGCCCAGGTCGACCACGTCCAGGCT < 4:136772/149‑1 GACCAGCCTGCAAGGCCGCTTGCAGCTGGTTTTCGGTCATCGCAGGTTGACGGGCAAAGTTGGCAGTACCGGTGCCCAGCCGCAGATGGCGCACGCCGGGCAGTTCCAGCTGCGCGTCAATGGTGCCCAGGTCGACCACGTCCAGGCTG < 6:144024/149‑1 GACCAGCCTGCAAGGCCGCTTGCAGCTGGTTTTCGGTCATCGCAGGTTGACGGGCAAAGTTGGCAGTACCGGTGCCCAGCCGCAGATGGCGCACGCCGGGCAGTTCCAGCTGCGCGTCAATGGTGCCCAGGTCGACCACGTCCAGGCTG > 6:253399/1‑149 GTGCCCAGCCGCAGATGGCGCACGCCGGGCAGTTCCAGCTGCGCGTCAATGGTGCCCAGGTCGACCACGTCCAGGCTGGGCACCGGTACTGCCAACTTTGCCCGTCAACCTGCGATGACCGAAAACCAGCTGCAAGCGGCCTTGCAGGC > 2:271627/1‑149 CCCAGCCGCAGATGGCGCACGCCGGGCAGTTCCAGCTGCGCGTCAATGGTGCCCAGGTCGACCACGTCCAGGCTGGGCACCGGTACTGCCAACTTTGCCCGTCAACCTGCGATGACC > 1:81749/1‑117 CCCAGCCGCAGATGGCGCACGCCGGGCAGTTCCAGCTGCGCGTCAATGGTGCCCAGGTCGACCACGTCCAGGCTGGGCACCGGTACTGCCAACTTTGCCCGTCAACCTGCGATGACC < 2:81749/117‑1 TCGCGACCAGCCTGCAAGGCCGCTTGCAGCTGGTTTTCGGTCATCGCAGGTTGACGGGCAAAGTTGGCAGTACCGGTGCCCAGCCGCAGATGGCGCACGCCGGGCAGTTCCAGCTGCGCGTCAATGGTGCCCAGGTCGACCACGTCCAGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1874159‑1874006‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctggGCACCGGTACTGCCAACTTTGCCCGTCAACCTGCGATGACCGAAAACCAGCTGCAAGCGGCCTTGCAGGC > NC_002947/1874081‑1874150 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |