| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3112998 = | 44 (0.690) | 3 (0.050) | 3/248 | NT | 6.7% | coding (149/771 nt) | PP_2727 | C factor cell‑cell signaling protein |
| ? | NC_002947 | 3113039 = | 42 (0.710) | coding (108/771 nt) | PP_2727 | C factor cell‑cell signaling protein | |||||
CACGCCGATGAGCCTGATCAACGACCTTCAGACACCCGCCAACGTGCTGGTCTGCGGGGCCAGCCAAGGAATTGGCCTGGCATTGTGCACGCAGTTGCTGGCGCGCGATGACATCGGGCTGGTGTTCGCCGTTTCGCGACGAGCCACCACCAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3113153‑3112998‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccagcccGATGTCATCGCGCGCCAGCAACTGCGTGCACAATGCCAGGCCAATTCCTTGGCTGGCCCCGCAGACCAGCACGTTGGCGGGTGTCTGAAGGTCGTTGATCAGGCTCATCGGCGTGTCCTCTTGGCTGGGCGCTGGCGCCTCGT > NC_002947/3113039‑3113181 CACGCCGATGAGCCTGATCAACGACCTTCAGACACCCGCCAACGTGCTGGTCTGCGGGGCCAGCCAAGGAATTGGCCTGGCATTGTGCACGCAGTTGCTGGCGAGCGATGACATCGGGCTGGTGTTCGCCGTTTCGCGACGAGCCACCA > 5:55231/1‑149 ACGCCGATGAGCCTGATCAACGACCTTCAGACACCCGCCAACGTGCTGGTCTGCGGGGCCAGCCAAGGAATTGGCCTGGCATTGTGCACGCAGTTGCTGGCGCGCGATGACATCGGGCTGGTGTTCGCCGTTTCGCGACGAGCCACCAC > 6:254848/1‑149 GCCGATGAGCCTGATCAACGACCTTCAGACACCCGCCAACGTGCTGGTCTGCGGGGCCAGCCAAGGAATTGGCCTGGCATTGTGCACGCAGTTGCTGGCGCGCGATGACATCGGGCTGGTGTTCGCCGTTTCGCGACGAGCCACCACCA < 3:13181/149‑1 ACATCGGGCTGGTGTTCGCCGTTTCGCGACGAGCCACCACCAGCCCGATGTCATCGCGCGCCAGCAACTGCGTGCACACTGCCAGGCCAATTCCTTGGCTGGCCCCGCAGACCAGCACGTTGGCGGGTGTCTGAAGGTCGTTGATCAGG > 7:255792/1‑149 ATCGGGCTGGTGTTCGCCGTTTCGCGACGAGCCACCACCAGCCCGATGTCATCGCGCGCCAGCAACTGCCTGCACAATGCCAGGCCAATTCCTTGGCTGCCCCCGCAGACCAGCACGTTGGCGGGTGTCTGAAGGTCGTTGATCAGGC > 8:117370/1‑148 GGGCTGGTGTTCGCCGTTTCGCGACGAGCCACCACCAGCCCGATGTCATCGCGCGCCAGCAACTGCGTGCACAATGCCAGGCCAATTCCTTGGCTGGCCCCGCAGACCAGCACGTTGGCGGGTGTCTGAAGGTCGTTGATCAGGCTCAT > 6:129842/1‑149 ACCAGCCCGATGTCATCGCGCGCCAGCAACTGCGTGCACAATGCCAGGCCAATTCCTTGGCTGGCCCCGCAGACCAGCACGTTGGCGGGTGTCTGAAGGTCGTTGATCAGGCTCATCGGCGTGTCCTCTTGGCTGGGCGCTGGCGCCTC > 2:341563/1‑149 ACCAGCCCGATGTCATCGCGCGCCAGCAACTGCGTGCACAATGCCAGGCCAATTCCTTGGCTGGCCCCGCAGACCAGCACGTTGGCGGGTGTCTGAAGGTCGTTGATCAGGCTCATCGGCGTGTCCTCTTGGCTGGGCGCTGGCGCCTC < 5:45029/149‑1 ACCAGCCCGATGTCATCGCGCGCCAGCAACTGCGTGCACAATGCCAGGCCAATTCCTTGGCTGGCCCCGCAGACCAGCACGTTGGCGGGTGTCTGAAGGTCGTTGATC < 7:345118/108‑1 ACCAGCCCGATGTCATCGCGCGCCAGCAACTGCGTGCACAATGCCAGGCCAATTCCTTGGCTGGCCCCGCAGACCAGCACGTTGGCGGGTGTCTGAAGGTCGTTGATC > 8:345118/1‑108 CAGCCCGATGTCATCGCGCGCCAGCAACTGCGTGCACAATGCCAGGCCAATTCCTTGGCTGGCCCCGCAGACCAGCACGTTGGCGGGTGTCTGAAGGTCGTTGATCAGGCTCATCGGCGTGTCCTCTTGGCTGGGCGCTGGCGCCTCGT > 3:228517/1‑149 CACGCCGATGAGCCTGATCAACGACCTTCAGACACCCGCCAACGTGCTGGTCTGCGGGGCCAGCCAAGGAATTGGCCTGGCATTGTGCACGCAGTTGCTGGCGCGCGATGACATCGGGCTGGTGTTCGCCGTTTCGCGACGAGCCACCACCAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3113153‑3112998‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccagcccGATGTCATCGCGCGCCAGCAACTGCGTGCACAATGCCAGGCCAATTCCTTGGCTGGCCCCGCAGACCAGCACGTTGGCGGGTGTCTGAAGGTCGTTGATCAGGCTCATCGGCGTGTCCTCTTGGCTGGGCGCTGGCGCCTCGT > NC_002947/3113039‑3113181 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |