New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3112998 =	44 (0.690)	3 (0.050)	3/248	NT	6.7%	coding (149/771 nt)	PP_2727	C factor cell‑cell signaling protein
	?	NC_002947	3113039 =	42 (0.710)					coding (108/771 nt)	PP_2727	C factor cell‑cell signaling protein

ACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGATGTCATCGCGCGCCAGCAACTGCGTGCACAATGCCAGGCCAATT‑CCTTGGCTGGCCCCGCAGACCAGCACGTTGGCGGGTGTCTGAAGGTCGTTGATCAGG  >  NC_002947/3112851‑3113141                                                                                                                                                    |                                                                                                                                                 aCGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAgg                                                                                                                                                 >  7:163284/1‑149 (MQ=255)     acgaggcgccagcgcccagccaagaggacacgccgatgagcctgatcaacgaccttcagacacccgccaacgtgctggtctgcggggccagccaaggaattggcctggcattgtgcacgcagttgctggcgcgcgatgacatcGGGCtg                                                                                                                                             >  3:228517‑M1/144‑149 (MQ=255)       gaggcgccagcgcccagccaagaggacacgccgatgagcctgatcaacgaccttcagacacccgccaacgtgctggtctgcggggccagccaaggaattggcctggcattgtgcacgcagttgctggcgcgcgatgacatcGGGCtggt                                                                                                                                           <  5:45029‑M1/8‑1 (MQ=255)       gaggcgccagcgcccagccaagaggacacgccgatgagcctgatcaacgaccttcagacacccgccaacgtgctggtctgcggggccagccaaggaattggcctggcattgtgcacgcagttgctggcgcgcgatgacatcGGGCtggt                                                                                                                                           >  2:341563‑M1/142‑149 (MQ=255)       aGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAGGGCtggt                                                                                                                                           <  1:303782/149‑1 (MQ=255)        gCGTGCTGAAGACCAGGGTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAGGGCtggtg                                                                                                                                          <  2:167623/149‑1 (MQ=255)          gTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAGGGCtggtggt                                                                                                                                        <  7:277758/149‑1 (MQ=255)              tGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAGGGCTGGTGGTGGCt                                                                                                                                    >  7:339116/1‑149 (MQ=255)                  gACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAGGGCTGGTGGTGGCtcgtc                                                                                                                                >  7:233118/1‑149 (MQ=255)                   aCCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAGGGCTGGTGGTGGCtcgtcg                                                                                                                               >  4:50148/1‑149 (MQ=255)                     cAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGCTCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTcgc                                                                                                                              >  2:280814/1‑148 (MQ=255)                             gTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGc                                                                                                                      >  2:318234/1‑148 (MQ=255)                                  tCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAacac                                                                                                                >  3:95080/1‑149 (MQ=255)                                    gcagcaGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAacac                                                                                                                >  2:53396/1‑147 (MQ=255)                                        cagGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGccc                                                                                                          <  3:50148/149‑1 (MQ=255)                                        atgagcctgatcaacgaccttcagacacccgccaacgtgctggtctgcggggccagccaaggaattggcctggcattgtgcacgcagttgctggcgcgcgatgacatcGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGccc                                                                                                          >  6:129842‑M1/109‑149 (MQ=255)                                            gcctgatcaacgaccttcagacacccgccaacgtgctggtctgcgggggcagccaaggaattggcctggcattgtgcaggcagttgctggcgcgcgatgacatcGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGAt                                                                                                       >  8:117370‑M1/105‑148 (MQ=255)                                             cctgatcaacgaccttcagacacccgccaacgtgctggtctgcggggccagccaaggaattggcctggcagtgtgcacgcagttgctggcgcgcgatgacatcGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGATGt                                                                                                     >  7:255792‑M1/104‑149 (MQ=255)                                                gatcaacgaccttcagacacccgccaacgtgctggtctgcggggccagccaaggaattggcctggcattgtgcacgcagttgctggcgcgcgatgacatcGGGCtggt                                                                                                                                           <  7:345118‑M1/8‑1 (MQ=255)                                                gatcaacgaccttcagacacccgccaacgtgctggtctgcggggccagccaaggaattggcctggcattgtgcacgcagttgctggcgcgcgatgacatcGGGCtggt                                                                                                                                           >  8:345118‑M1/101‑108 (MQ=255)                                                 aCCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCTGGGCTGGTGGTGGCTCGTCGCGTAAGGGCTAACACCAGCCCGATGTCATc                                                                                                 <  5:46537/149‑1 (MQ=255)                                                   cTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGATGTCATcgc                                                                                               >  2:193987/1‑149 (MQ=255)                                                         ggCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGATGTCATCGCGCGCCa                                                                                         <  8:233118/149‑1 (MQ=255)                                                                 tttGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGATGTCATcgcgc                                                                                             >  3:74722/1‑137 (MQ=255)                                                                 tttGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGATGTCATcgcgc                                                                                             <  4:74722/137‑1 (MQ=255)                                                                   tGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGATGTCAt                                                                                                  >  6:222381/1‑130 (MQ=255)                                                                   tGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGATGTCAt                                                                                                  <  5:222381/130‑1 (MQ=255)                                                                    gCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGATGTCATCGCGCGCCAGCAACTGCGt                                                                               <  6:144817/148‑1 (MQ=255)                                                                     cAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGATGTCATCGCGCGCCAGCAACTGCGTGc                                                                             <  1:318234/149‑1 (MQ=255)                                                                       gTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGATGTCATCGCGCGCCAGCAACTGCGTGca                                                                            >  6:66179/1‑148 (MQ=255)                                                                              cTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGATGTCATCGCGCGCCAGCAACTGCGTGCACAATGc                                                                      >  1:192871/1‑147 (MQ=255)                                                                               tCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGATGTCATCGCGCGCCAGCAACTGCGTGCACAATGCCAg                                                                   >  6:116358/1‑149 (MQ=255)                                                                                 ggATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGATGTCATCGCGCGCCAGCAACTGCGTGCACAATGCCAgg                                                                  <  3:242372/148‑1 (MQ=255)                                                                                 ggATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGATGTCATCGCGCGCCAGCAACTGCGTGCACAATGCCAGGc                                                                 >  5:123865/1‑149 (MQ=255)                                                                                   aTCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGATGTCATCGCGCGCCAGCAACTGCGTGCACAATGCCAGGcc                                                                >  4:369728/1‑148 (MQ=255)                                                                                      gggCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGATGTCATCGCGCGCCAGCAACTGCGTGCACAATGCCAGGCCAAt                                                             <  8:163284/148‑1 (MQ=255)                                                                                        gCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGATGTCATCGCGCGCCAGCAACTGCGTGCACACTGCCAGGCGAATT‑cc                                                         >  8:225151/1‑149 (MQ=255)                                                                                          gTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGATGTCATCGCGCGCCAGCAACTGCGTGCACAATGCCAGGCCAATT‑CCtt                                                       <  8:251431/149‑1 (MQ=255)                                                                                           tCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGATGTCATCGCGCGCCAGCAACTGCGTGCACAATGCCAGGCCAATT‑CCTtg                                                      <  1:193987/149‑1 (MQ=255)                                                                                             gCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGATGTCATCGCGCGCCAGCAACTGCGTGCACAATGCCAGGCCAATT‑CCTtgg                                                     >  1:89157/1‑148 (MQ=255)                                                                                                           ccaaccGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGATGTCATCGCGCGCCAGCAACTGCGTGCACAATGCCAGGCCAATT‑CCTTGGCTGGCCCCGCAGAc                                       >  8:349412/1‑148 (MQ=255)                                                                                                               ccGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGATGTCATCGCGCGCCAGCAACTGCGTGCACAATGCCAGGCCAATT‑CCTTGGCTGGCCCCGCAGACCAGCa                                  <  3:369728/149‑1 (MQ=255)                                                                                                                      gcgTGCTCTGTGAACAAGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGATGTCATCGCGCGCCAGCAACTGCGTGCACAATGCCAGGCCAATT‑CCTTGGCTGGCCCCGCAGACCAGCACGTTGGc                           <  4:95080/149‑1 (MQ=255)                                                                                                                         tGCTCTGTGAACAAGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGATGTCATCGCGCGCCAGCAACTGCGTGCACAATGCCAGGCCAATTACCTTGGCTGGCCCCGCAGACCAGCACGTTGGCgg                         <  1:53396/149‑1 (MQ=255)                                                                                                                            tctGTGAACAAGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGATGTCATCGCGCGCCAGCAACTGCGTGCACAATGCCAGGCCAATT‑CCTTGGCTGGCCCCGCAGACCAGCACGTTGGCGGgtgt                     >  2:389181/1‑149 (MQ=255)                                                                                                                                tgAACAAGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGATGTCATCGCGCGCCAGCAACTGCGTGCACAATGCCAGGCCAATT‑CCTTGGCTGGCCCCGCAGACCAGCACGTTGGCGGGTGTCt                   <  5:66179/147‑1 (MQ=255)                                                                                                                                  aaCAAGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGATGTCATCGCGCGCCAGCAACTGCGTGCACAATGCCAGGCCAATT‑CCTTGGCTGGCCCCGCAGACCAGCACGTTGGCGGGTGTCTGAAg               >  6:45029/1‑149 (MQ=255)                                                                                                                                   aCAAGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGATGTCATCGCGCGCCAGCAACTGCGTGCACAATGCCAGGCCAATT‑CCTTGGCTGGCCCCGCAGACCAGCACGTTGGCGGGTGTCTGAAgg              >  5:302622/1‑149 (MQ=255)                                                                                                                                     aaGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGATGTCATCGCGCGCCAGCAACTGCGTGCACAATGCCAGGCCAATT‑CCTTGGCTGGCCCCGCAGACCAGCACGTTGGCGGGTGTCTGAAGGTc            >  6:55231/1‑149 (MQ=255)                                                                                                                                     aaGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGATGTCATCGCGCGCCAGCAACTGCGTGCACAATGCCAGGCCAATT‑CCTTGGCTGGCCCCGCAGACCAGCACGTTGGCGGGTGTCTGAAGGTc            >  5:254848/1‑149 (MQ=255)                                                                                                                                       ggTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGATGTCATCGCGCGCCAGCAACTGCGTGCACAATGCCAGGCCAATT‑CCTTGGCTGGCCCCGCAGACCAGCACGTTGGCGGGTGTCTGAAGGTCGt          >  3:196289/1‑149 (MQ=255)                                                                                                                                        gTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGATGTCATCGCGCGCCAGCAACTGCGTGCACAATGCCAGGCCAATT‑CCTTGGCTGGCCCCGCAGACCAGCACGTTGGCGGGTGTCTGAAGGTCGtt         <  1:168425/149‑1 (MQ=255)                                                                                                                                             cAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGAGGTCATCGCGCGCCAGCAACTGCGTGCACAATGCCAGGCCAATT‑CCTTGGCTGGCCCCGCAGACCAGCACGTTGGCGGGTGTCTGAAGGTCGTTGAt      >  3:21823/1‑147 (MQ=255)                                                                                                                                               gcgcAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCAGATGTCATCGCGCGCCAGCAACTGCGTGCACAATGCCAGGCCAATT‑CCTTGGCTGGCCCCGCAGACCAGCACGTTGGCGGGTGTCTGAAGGTCGTTGATCAgg  <  2:89157/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                 ACGCCAAGCGTGCTGAAGACCAGGTTCAGTTGGTCGCAGCAGGCGCCCACCTGCGCGGCCAGTGTTTGCAGTGCCTGCTCGGATCGGGCGTCGCAGTCGAGGCGAACCAACCGTCGCGCGTGCTCTGTGAACAAGGTATCCAGCGCAGGGCTGGTGGTGGCTCGTCGCGAAACGGCGAACACCAGCCCGATGTCATCGCGCGCCAGCAACTGCGTGCACAATGCCAGGCCAATT‑CCTTGGCTGGCCCCGCAGACCAGCACGTTGGCGGGTGTCTGAAGGTCGTTGATCAGG  >  NC_002947/3112851‑3113141

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.