New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3164634	48 (0.760)	3 (0.050)	3/258	NT	6.0%	coding (145/1083 nt)	PP_2779	putative Beta‑ketoacyl synthase
	?	NC_002947	= 3164662	47 (0.760)					coding (173/1083 nt)	PP_2779	putative Beta‑ketoacyl synthase

ATGACATGACCAGATCCAATTCAACTGCTGTTTATATCACTGCGGCGTCGGTACTCAACGCTGCCGGTACTGAATGTGCGCCTCGTGACAGTCAACCTCAGGCCGCGCAACCGCTGGATTTCGACCCGGCACGTCTGGCCCATTGTGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3164485‑3164634 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgTACACACCCGCCGGCAAGGCGGGCGCTGCGACACAATGGGC  <  NC_002947/3164662‑3164622                                                                                                                                                                                                 ATGACATGACCAGATCCAATTCAACTGCTGTTTATATCACTGCGGCGTCGGTACTCAACGCTGCCGGTACTGAATGTGCGCCTCGTGACAGTCAACCTCAGGCCGCGCAACCGCTGGATTTCGACCCGGCACGTCTGGCCCATTGTGTC                                            <  4:159309/149‑1                                       ACTGCGGCGTCGGTACTCAACGCTGCCGGTACTGAATGTGCGCCTCGTGACAGTCAACCTCAGGCCGCGCAACCGCTGGATTTCGACCCGGCACGTCTGGCCCATTGTGTCGTACACACCCGCCGGCAAGGCGGGCGCTGCGACACAAT      <  8:53578/149‑1                                                       TCAACGCTGCCGGTACTGAATGTGCGCCTCGTGACAGTCAACCTCAGGCCGCGCAACCGCTGGATTTCGACCCGGCACGTCTGGCCCATTGTGTCGTACACACCCGCCGGCAAGGCGGGCGCTGCGACACAATGGGC  >  5:156431/1‑137                                                       TCAACGCTGCCGGTACTGAATGTGCGCCTCGTGACAGTCAACCTCAGGCCGCGCAACCGCTGGATTTCGACCCGGCACGTCTGGCCCATTGTGTCGTACACACCCGCCGGCAAGGCGGGCGCTGCGACACAATGGGC  <  6:156431/137‑1                                                                                                                                                                                                 ATGACATGACCAGATCCAATTCAACTGCTGTTTATATCACTGCGGCGTCGGTACTCAACGCTGCCGGTACTGAATGTGCGCCTCGTGACAGTCAACCTCAGGCCGCGCAACCGCTGGATTTCGACCCGGCACGTCTGGCCCATTGTGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3164485‑3164634 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgTACACACCCGCCGGCAAGGCGGGCGCTGCGACACAATGGGC  <  NC_002947/3164662‑3164622

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.