| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4270835 = | 61 (0.960) | 3 (0.050) | 3/254 | NT | 5.8% | coding (975/1896 nt) | mrdA‑I | transpeptidase |
| ? | NC_002947 | 4270923 = | 40 (0.660) | coding (1063/1896 nt) | mrdA‑I | transpeptidase | |||||
GCCGCTGCGGTTCCAGTTGCGGTACTTGTGGTCATAGTTGGGCAGTTCGTAGTAGCCCGGGTCGAACACCCGGCTGCCAGGGGTGATCACCCCGCTGTCGAGGCCAGCGATGGCCACTTCAGGCTTCACGGTCGAGCCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4270976‑4270835‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgggcTACTACGAACTGCCCAACTATGACCACAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGC > NC_002947/4270923‑4271067 GCCGCTGCGGTTCCAGTTGCGGTACTTGTGGTCATAGTTGGGCAGTTCGTAGTAGCCCGGGTCGAACACCCGGCTGCCAGGGGTGATCACCCCGCTGTCGAGGCCAGCGATGGCCACTTCAGGCTTCACGGTCGAGCC < 1:270928/138‑1GCCGCTGCGGTTCCAGTTGCGGTACTTGTGGTCATAGTTGGGCAGTTCGTAGTAGCCCGGGTCGAACACCCGGCTGCCAGGGGTGATCACCCCGCTGTCGAGGCCAGCGATGGCCACTTCAGGCTTCACGGTCGAGCC > 2:270928/1‑138 CCGGGTCGAACACCCGGCTGCCAGGGGTGATCACCCCGCTGTCGAGGCCAGCGATGGCCACTTCAGGCTTCACGGTCGAGCCGGGCTACTACGAACTGCCCAACTATGACCACAAGTACCGCAACTGGAACCGCAGCGGAGACGGCTGG > 5:40255/1‑149 GAACACCCGGCTGCCAGGGGTGATCACCCCGCTGTCGAGGCCAGCGATGGCCACTTCAGGCTTCACGGTCGAGCCGGGCTACTACGAACTGCCCAACTATGACCACAAGTACCGCAACTTGAACCGCAGCGGCGACGGCTGGGTG < 6:16056/145‑1 GAACACCCGGCTGCCAGGGGTGATCACCCCGCTGTCGAGGCCAGCGATGGCCACTTCAGGCTTCACGGTCGAGCCGGGCTACTACGAACTGCCCAACTATGACCACAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTG > 5:16056/1‑145 CCGGGCTACTACGAACTGCCCAACTATGACCACAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCT < 6:330984/149‑1 CCGGGCTACTACGAACTGCCCAACTATGACCACAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCT < 8:170378/149‑1 GGGCTACTACGAACTGCCCAACTATGACCACAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGC < 2:335940/149‑1 GCCGCTGCGGTTCCAGTTGCGGTACTTGTGGTCATAGTTGGGCAGTTCGTAGTAGCCCGGGTCGAACACCCGGCTGCCAGGGGTGATCACCCCGCTGTCGAGGCCAGCGATGGCCACTTCAGGCTTCACGGTCGAGCCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4270976‑4270835‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgggcTACTACGAACTGCCCAACTATGACCACAAGTACCGCAACTGGAACCGCAGCGGCGACGGCTGGGTGGACATGTACACCGCCATCATGCGTTCCAACGACACCTACTTCTACGACCTGGCGCACAAGTTGGGCATCGACCGGCTGC > NC_002947/4270923‑4271067 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |