| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5779077 | 75 (1.180) | 3 (0.050) | 3/254 | NT | 3.9% | coding (498/2151 nt) | PP_5065 | hypothetical protein |
| ? | NC_002947 | = 5779099 | 76 (1.250) | coding (476/2151 nt) | PP_5065 | hypothetical protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATACCGCCGATGACAAGAGCGTTCCATTGAGGTTGGGCATTCGCCTGCCTGGCCTGTCGCAGGCCTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5778928‑5779077‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcccGTGCCCGCTTCATTGCTGCTGTGGGCCAATCTGCGCTGAGCCAACCTGAGCGCCAGGAACTCATGGCGGTGACGGTCGCTGATGCCGCTCTGCCAAGCACCGTGCAAGGCCTGCGACAGGCCAGGCAGGCGAATGCCCAACCTCAAT < NC_002947/5779099‑5778953 ATACCGCCGATGACAAGAGCGTTCCATTGAGGTTGGGCATTCGCCTGCCTGGCCTGTCGCAGGCCTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCC > 5:62493/1‑149 ACCGCCGATGACAAGAGCGTTCCATTGAGGTTGGGCATTCGCCTGCCTGGCCTGTCGCAGGCCTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGG > 7:357525/1‑145 ACCGCCGATGACAAGAGCGTTCCATTGAGGTTGGGCATTCGCCTGCCTGGCCTGTCGCAGGCCTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGG < 8:357525/145‑1 GGCATTCGCCTGCCTGGCCTGTCGCAGGCCTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCGTGCCCGCTTCATTGCTGCTGTGGGCCAATCTGC < 6:30416/149‑1 GCATTCGCCTGCCTGGCCTGTCGCAGGCCTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCGTGCCCGCTTCATTGCTGCTGTGGGCCAATCTG > 3:300389/1‑147 GCATTCGCCTGCCTGGCCTGTCGCAGGCCTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCGTGCCCGCTTCATTGCTGCTGTGGGCCAATCTG < 4:300389/147‑1 TGGCCCGTGCCCGCTTCATTGCTGCTGTGGGCCAATCTGCGCTGAGCCAACCTGAGCGCCAGGAACTCATGGCGGTGACGGTCGCTGATGCCGCTCTGCCAAGCACCGTGCAAGGCCTGCGACAGGCCAGGCAGGCGAATGCCCAACCT > 5:202273/1‑149 TGGCCCGTGCCCGCTTCATTGCTGCTGTGGGCCAATCTGCGCTGAGCCAACCTGAGCGCCAGGAACTCATGGCGGTGACGGTCGCTGATGCCGCTCTGCCAAGCACCGTGCAAGGCCTGCGACAGGCCAGGCAGGCGAATGCCCAACCT > 8:12322/1‑149 GCCCGTGCCCGCTTCATTGCTGCTGTGGGCCAATCTGCGCTGAGCCAACCTGAGCGCCAGGAACTCATGGCGGTGACGGTCGCTGATGCCGCTCTGCCAAGCACCGTGCAAGGCCTGCGACAGGCCAGGCAGGCGAATGCCCAACCT < 7:340720/147‑1 CCGTGCCCGCTTCATTGCTGCTGTGGGCCAATCTGCGCTGAGCCAACCTGAGCGCCAGGAACTCATGGCGGTGACGGTCGCTGATGCCGCTCTGCCAAGCACCGTGCAAGGCCTGCGACAGGCCAGGCAGGCGAATGCCCAACCTCAAT < 5:250198/149‑1 CCGTGCCCGCTTCATTGCTGCTGTGGGCCAATCTGCGCTGAGCCAACCTGAGCGCCAGGAACTCATGGCGGTGACGGTCGCTGATGCCGCTCTGCCAAGCACCGTGCAAGGCCTGCGACAGGCCAGGCAGGCGAATGCCCAACCTCAAT > 7:285499/1‑149 ATACCGCCGATGACAAGAGCGTTCCATTGAGGTTGGGCATTCGCCTGCCTGGCCTGTCGCAGGCCTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5778928‑5779077‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcccGTGCCCGCTTCATTGCTGCTGTGGGCCAATCTGCGCTGAGCCAACCTGAGCGCCAGGAACTCATGGCGGTGACGGTCGCTGATGCCGCTCTGCCAAGCACCGTGCAAGGCCTGCGACAGGCCAGGCAGGCGAATGCCCAACCTCAAT < NC_002947/5779099‑5778953 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |