New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 577907775 (1.180)3 (0.050) 3/254 NT 3.9% coding (498/2151 nt) PP_5065 hypothetical protein
?NC_002947 = 5779099 76 (1.250)coding (476/2151 nt) PP_5065 hypothetical protein
Rejected: Frequency below/above cutoff threshold.

ATTGAGGTTGGGCATTCGCCTGCCTGGCCTGTCGCAGGCCTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCAACTGCCAGAACGCCGTCAGTACTTGCCGAGGGTCGAGCCGCACTTCGTTGCGCTCGTCGTAAACTGC  >  NC_002947/5778953‑5779244
                                                                                                                                                  |                                                                                                                                                 
aTTGAGGTTGGGCATTCGCCTGCCTGGCCTGTCGCAGGCCTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACgg                                                                                                                                                 >  7:285499‑M2/1‑147 (MQ=255)
aTTGAGGTTGGGCATTCGCCTGCCTGGCCTGTCGCAGGCCTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACgg                                                                                                                                                 <  5:250198‑M2/149‑3 (MQ=255)
    aGGTTGGGCATTCGCCTGCCTGGCCTGTCGCAGGCCTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACgggcca                                                                                                                                             >  8:12322‑M2/1‑143 (MQ=255)
    aGGTTGGGCATTCGCCTGCCTGGCCTGTCGCAGGCCTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACgggcca                                                                                                                                             >  5:202273‑M2/1‑143 (MQ=255)
    aGGTTGGGCATTCGCCTGCCTGGCCTGTCGCAGGCCTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACgggc                                                                                                                                               <  7:340720‑M2/147‑5 (MQ=255)
      gTTGGGCATTCGCCTGCCTGGCCTGTCGCAGGCCTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAg                                                                                                                                            >  8:2646/1‑148 (MQ=255)
          ggCATTCGCCTGCCTGGCCTGTCGCAGGCCTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGacac                                                                                                                                       <  7:294114/149‑1 (MQ=255)
          ggCATTCGCCTGCCTGGCCTGTCGCAGGCCTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGaca                                                                                                                                        <  1:104502/148‑1 (MQ=255)
           gCATTCGCCTGCCTGGCCTGTCGCAGGCCTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGacac                                                                                                                                       >  3:357893/1‑148 (MQ=255)
             aTTCGCCTGCCTGGCCTGTCGCAGGCCTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACaa                                                                                                                                     >  4:242732/1‑148 (MQ=255)
             aTTCGCCTGCCTGGCCTGTCGCAGGCCTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACaa                                                                                                                                     >  5:146605/1‑148 (MQ=255)
              ttCGCCTGCCTGGCCTGTCGCAGGCCTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACaa                                                                                                                                     >  7:293446/1‑147 (MQ=255)
              ttCGCCTGCCTGGCCTGTCGCAGGCCTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATa                                                                                                                                   <  4:98911/149‑1 (MQ=255)
              ttCGCCTGCCTGGCCTGTCGCAGGCCTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACCGGCCAGGACACaa                                                                                                                                     >  6:181435/1‑147 (MQ=255)
               tCGCCTGCCTGGCCTGTCGCAGGCCTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAg                                                                                                                                  >  3:83641/1‑149 (MQ=255)
                 gcctgcctGGCCTGTCGCAGGCCTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTc                                                                                                                                >  7:318523/1‑149 (MQ=255)
                  cctgcctgGCCTGTCGCAGGCCTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCt                                                                                                                               >  4:25475/1‑149 (MQ=255)
                       ctggcctgTCGCAGGCCTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGc                                                                                                                           >  6:62305/1‑148 (MQ=255)
                        tggcctgTCGCAGGCCTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGTCCAGGACACAATAGTCTTCGcc                                                                                                                          >  8:332503/1‑148 (MQ=255)
                          gcctgTCGCAGGCCTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATg                                                                                                                       <  6:250198/149‑1 (MQ=255)
                           cctgTCGCAGGCCTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGc                                                                                                                      <  6:62493/149‑1 (MQ=255)
                            ctgTCGCAGGCCTTGCACGGTGCTTGGCATAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCACATTGCCCCACAGCAGCTATGAAGCGGGCACGCGCCACGACACAATAGTCTTCGCCATGcc                                                                                                                     >  3:307873/1‑149 (MQ=255)
                            ctgTCGCAGGCCTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGcc                                                                                                                     >  6:400334/1‑149 (MQ=255)
                                 gCAGGCCTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATCAAGCGGGCACGGGCCACGACACAAAAGTCTTCGCCATGCCGTGAc                                                                                                                >  2:318216/1‑149 (MQ=255)
                                  cAGGCCTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGAcc                                                                                                               <  8:293446/149‑1 (MQ=255)
                                  cAGGCCTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGAcc                                                                                                               <  5:398649/149‑1 (MQ=255)
                                      ccTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGaa                                                                                                           <  7:2646/149‑1 (MQ=255)
                                       cTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAAc                                                                                                          >  7:124241/1‑149 (MQ=255)
                                          gCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTg                                                                                                       >  5:339170/1‑149 (MQ=255)
                                          gCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCGCAGCGCAGAGTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACt                                                                                                         <  3:321582/147‑1 (MQ=255)
                                          gCACGGTGCTGGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACt                                                                                                         <  8:275934/147‑1 (MQ=255)
                                           cACGGTGCTTGGGAGAGCGGCATCAGTGACCGTCACCGCCCTGAGGTCCTGGCGCTCAGGTTGGCGCAGCGCAGATTTGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTCACCGGAACTTg                                                                                                       <  6:246500/148‑1 (MQ=255)
                                           cACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGc                                                                                                      >  6:239322/1‑149 (MQ=255)
                                            aCGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCt                                                                                                     <  8:318523/149‑1 (MQ=255)
                                             cGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCt                                                                                                     >  6:336013/1‑148 (MQ=255)
                                                  cTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAgcgc                                                                                               <  1:123783/149‑1 (MQ=255)
                                                   ttGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGcc                                                                                              >  5:203740/1‑149 (MQ=255)
                                                        agagCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGgt                                                                                         <  5:239322/149‑1 (MQ=255)
                                                        agagCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGgt                                                                                         <  1:292385/149‑1 (MQ=255)
                                                        agagCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGgt                                                                                         <  8:124241/149‑1 (MQ=255)
                                                                aTCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGcc                                                                                 >  8:289510/1‑149 (MQ=255)
                                                                   aGCGACCGTCACCGCCATGAGTTACTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCAACAGCAGCAATGAAGCGGGCCAGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACATGCTCAGCGCCTCCGTGTAGCGcccac                                                                              >  2:380072/1‑147 (MQ=255)
                                                                   aGCGACCGTCACAGCCATGAGTTCCTGGCTCTCAGTTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGAGGGCACGGGCCAGGACACAATAGTAATCGCCATGCCGTGAACGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTg                                                                              >  7:266388/1‑149 (MQ=255)
                                                                    gCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGc                                                                             <  6:146605/149‑1 (MQ=255)
                                                                     cGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCTGCGCCTCGGTGTAGCGCCCTGCa                                                                            <  7:138627/149‑1 (MQ=255)
                                                                        ccGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCaaaa                                                                         <  4:83641/149‑1 (MQ=255)
                                                                        acctgagcGCCAGGAACTCATGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGTGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCt                                                                               <  2:250494/136‑1 (MQ=255)
                                                                        acctgagcGCCAGGAACTCATGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGTGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCt                                                                               >  1:250494/8‑143 (MQ=255)
                                                                             aCCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCaa                                                                    <  4:357893/149‑1 (MQ=255)
                                                                              ccGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCAAc                                                                   >  2:120829/1‑149 (MQ=255)
                                                                                 ccATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCAACTGc                                                                <  6:203740/149‑1 (MQ=255)
                                                                                 ccATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCAACTGc                                                                >  3:180570/1‑149 (MQ=255)
                                                                                 ccATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCAACTGc                                                                >  5:202389/1‑149 (MQ=255)
                                                                                    tGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCAACTGCCAg                                                             <  7:196133/149‑1 (MQ=255)
                                                                                      aGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCAACTGCCAGaa                                                           <  7:102307/149‑1 (MQ=255)
                                                                                           cTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCGCGGGCCAGGACACAATAGTCTTCGTCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCAACTGCCAGAACGCCg                                                      >  7:290651/1‑149 (MQ=255)
                                                                                              gcgcTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCAACTGCCAGAACGCCGt                                                     <  1:318216/147‑1 (MQ=255)
                                                                                              gcgcTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCAACTGCCAGAACGCCGTCa                                                   <  6:209272/149‑1 (MQ=255)
                                                                                               cgcTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCAACTGCCAGAACGCCGTCAg                                                  <  3:242732/149‑1 (MQ=255)
                                                                                                gcTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCa                                                                     <  8:240614/129‑1 (MQ=255)
                                                                                                gcTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCa                                                                     >  7:240614/1‑129 (MQ=255)
                                                                                                gcTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCAACTGCCAGAACGCCGTCAg                                                  >  3:276673/1‑148 (MQ=255)
                                                                                                      gTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCAACTGCCAGAACGcc                                                       >  8:183407/1‑137 (MQ=255)
                                                                                                      gTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCAACTGCCAGAACGcc                                                       <  7:183407/137‑1 (MQ=255)
                                                                                                      gTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCAACTGCCAGAACGCCGTCAGTACTTGc                                           <  6:339170/149‑1 (MQ=255)
                                                                                                          gCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCAACTGCCAGAACGCCGTCAGTACTTGCCGAg                                       >  2:118345/1‑149 (MQ=255)
                                                                                                          gCTCAGCGCAGATTGGCCAACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCAACTGCCAGAACGCCGTCAGTACTTGCCGAg                                       <  7:718/149‑1 (MQ=255)
                                                                                                           cTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCAACTGCCAGAACGCCGTCAGTACTTGCCGAgg                                      <  3:128555/149‑1 (MQ=255)
                                                                                                            tCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCAACTGCCAGAACGCCGTCAGTACTTGCCGAggg                                     >  1:24845/1‑149 (MQ=255)
                                                                                                              aGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCAACTGCCAGAACGCCGTCAGTACTTGCCGAGGGTc                                   >  7:244884/1‑149 (MQ=255)
                                                                                                                 gcAGATTGGCCCACAGCAGCAATGAAGCGGGCACgggccaatctgcgctgagccaacctgagcgccaggaactcatggcggtgacggtcgctgatgccgctctgccaagcaccgtgcaaggcctgcgacaggccaggcaggcgaatgcc                                <  6:30416‑M2/149‑116 (MQ=255)
                                                                                                                  cAGATTGGCCCACAGCAGCAATGAAGCGGTCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCAACTGCCACAACGCCGTCAGTACTTGCCGAGGGTCGAGc                               <  4:307873/149‑1 (MQ=255)
                                                                                                                  cAGATTGGCCCACAGCAGCAATGAAGCGGGCACgggccaatctgcgctgagccaacctgagcgccaggaactcatggcggtgacggtcgctgatgccgctctgccaagcaccgtgcaaggcctgcgacaggccaggcaggcgaatgc                                 <  4:300389‑M2/147‑115 (MQ=255)
                                                                                                                  cAGATTGGCCCACAGCAGCAATGAAGCGGGCACgggccaatctgcgctgagccaacctgagcgccaggaactcatggcggtgacggtcgctgatgccgctctgccaagcaccgtgcaaggcctgcgacaggccaggcaggcgaatgc                                 >  3:300389‑M2/1‑33 (MQ=255)
                                                                                                                         gCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCAACTGCCAGAACGCCGTCAGTACTTGCCGAGGGTCGAGCCGCACtt                        <  1:120829/149‑1 (MQ=255)
                                                                                                                          cccTCAGCAGCAATGAAGCGGGGACGGGCGAGGACACAATAGGCTTCGCCATGCGGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGAGCTGCAAAATCCAACTGCCAGAAGGCCGTAAGTACTTGCCGTGGTTCGAGCGGCAGTTc                       <  8:266388/149‑1 (MQ=255)
                                                                                                                           ccACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCAACTGCCAGAACGCCGTCAGTACTTGCCGAGGGTCGAGCCGCACTTCg                      <  1:118345/149‑1 (MQ=255)
                                                                                                                            cacaGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCAAACTGACAGAACGCCGTCAGTACTTGCAGAGGGTCGAGCCGCACTTCGt                     >  4:260033/1‑149 (MQ=255)
                                                                                                                             acaGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCAACTGCCAGAACGCCGt                                                     >  2:71912/1‑116 (MQ=255)
                                                                                                                             acaGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCAACTGCCAGAACGCCGt                                                     <  1:71912/116‑1 (MQ=255)
                                                                                                                             acaGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCAACTGCCAGAACGCCGTCAGTACTTGCCGAGGGTCGAGCCGCACTTCGtt                    >  7:228820/1‑149 (MQ=255)
                                                                                                                             acaGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCAACTGCCAGAACGCCGTCAGTACTTGCCGAGGGTCGAGCCGCACTTCGtt                    <  5:181435/149‑1 (MQ=255)
                                                                                                                             acaGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCAACTGCCAGAACGCCGTCAGTACTTGCCGAGGGTCGAGCCGCACTTCGtt                    <  8:340720/149‑1 (MQ=255)
                                                                                                                               agcagcAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCAACTGCCAGAACGCCGTCAGTACTTGCCGAGGGTCGAGCCGCACTTCGTTgc                  <  8:244884/149‑1 (MQ=255)
                                                                                                                                 cagcaATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCAACTGCCAGAACGCCGTCAGTACTTGCCGAGGGTCGAGCCGCACTTCGTTgcgc                <  5:400334/149‑1 (MQ=255)
                                                                                                                                     aaTGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCAACTGCCAGAACGCCGTCAGTACTTGCCGAGGGTCGAGCCGCACTTCGTTGCGCtcgt            <  6:202389/149‑1 (MQ=255)
                                                                                                                                               gCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCAACTGCCAGAACGCCGTCAGTACTTGCCGAGGGTCGAGCCGCACTTCGTTGCGCTCGTCGTAAACTGc  <  5:62305/149‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                 
ATTGAGGTTGGGCATTCGCCTGCCTGGCCTGTCGCAGGCCTTGCACGGTGCTTGGCAGAGCGGCATCAGCGACCGTCACCGCCATGAGTTCCTGGCGCTCAGGTTGGCTCAGCGCAGATTGGCCCACAGCAGCAATGAAGCGGGCACGGGCCAGGACACAATAGTCTTCGCCATGCCGTGACCGGAACTTGCTCAGCGCCTCGGTGTAGCGCCCTGCAAAATCCAACTGCCAGAACGCCGTCAGTACTTGCCGAGGGTCGAGCCGCACTTCGTTGCGCTCGTCGTAAACTGC  >  NC_002947/5778953‑5779244

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.