| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5864144 = | 68 (1.070) | 3 (0.050) | 3/252 | NT | 5.3% | coding (2007/2253 nt) | cadA‑III | cadmium translocating P‑type ATPase |
| ? | NC_002947 | 5864222 = | 43 (0.710) | coding (1929/2253 nt) | cadA‑III | cadmium translocating P‑type ATPase | |||||
CGAGGGCAACCTGTTGCCGGCCGACAAGCTGAAAACCATTGAGGCGTTGTACGCACAAGGCCATCGGGTGGGCATGGTCGGTGACGGCATCAACGACGCCCCGGCGCTGGCCCGCGCCGAAATCGGTTTTGCCATGGCTGCTGCCGGCACCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5864297‑5864144‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccgacCATGCCCACCCGATGGCCTTGTGCGTACAACGCCTCAATGGTTTTCAGCTTGTCGGCCGGCAACAGGTTGCCCTCGGCGCGGTCGATTCCCACCACGGCAGCAATGGCCTGCGCAGTATGCGGATTGTCACCGGTCAGCATGA > NC_002947/5864222‑5864364 CGAGGGCAACCTGTTGCCGGCCGACAAGCTGAAAACCATTGAGGCGTTGTACGCACAAGGCCATCGGGTGGGCATGGTCGGTGACGGCATCAACGACGCCCCGGCGCTGGCCCGCGCCGAAATCGGTTTTGCCATGGCTGCTGCCGGCA > 6:397690/1‑149 GAGGGCAACCTGTTGCCGGCCGACAAGCTGAAAACCATTGAGGCGTTGTACGCACAAGGCCATCGGGTGGGCATGGTCGGTGACGGCATCAACGACGCCCCGGCGCTGGCCCGCGCCGAAATCGGTTTTGCCATGGCTGCTGCCGGCAC < 4:330659/149‑1 GAGGGCAACCTGTTGCCGGCCGACAAGCTGAAAACCATTGAGGCGTTGTACGCACAAGGCCATCGGGTGGGCATGGTCGGTGACGGCATCAACGACGCCCCGGCGCTGGCCCGCGCCGAAATCGGTTTTGCCATGGCTGCTGCCGGCAC < 8:30772/149‑1 GGCAACCTGTTGCCGGCCGACAAGCTGAAAACCATTGAGGCGTTGTACGCACAAGGCCATCGGGTGGGCATGGTCGGTGACGGCATCAACGACGCCCCGGCGCTGGCCCGCGCCGAAATCGGTTTTGCCATGGCTGCTGCCGGCACCGA < 3:7390/149‑1 GGCAACCTGTTGCCGGCCGACAAGCTGAAAACCATTGAGGCGTTGTACGCACAAGGCCATCGGGTGGGCATGGTCGGTGACGGCATCAACGACGCCCCGGAGCTGGCCCGCGCCGAAATCGGTTTTGCAATGGCTGCTGCCGGCACCGA > 5:100872/1‑149 GGTCGGTGACGGCATCAACGACGCCCCGGCGCTGGCCCGCGCCGAAATCGGTTTTGCCATGGCTGCTGCCGGCACCGACCATGCCCACCCGATGGCCTTGTGCGTACAACGCCTCAATGGT > 7:12584/1‑121 GGTCGGTGACGGCATCAACGACGCCCCGGCGCTGGCCCGCGCCGAAATCGGTTTTGCCATGGCTGCTGCCGGCACCGACCATGCCCACCCGATGGCCTTGTGCGTACAACGCCTCAATGGT < 8:12584/121‑1 GGTGACGGCATCAACGACGCCCCGGCGCTGGCCCGCGCCGAAATCGGTTTTGCCATGGCTGCTGCCGGCACCGACCATGCCCACCCGATGGCCTTGTGCGTACAACGCCTCAATGGTTTTCAGCTTGTCGGCCGGCAACAGGTTGCCCT > 7:120818/1‑149 ACCGACCATGCCCACCCGATGGCCTTGTGCGTACAACGCCTCAATGGTTTTCAGCTTGTCGGCCGGCAACAGGTTGCCCTCGGCGCGGTCGATTCCCACCACGGCAGCAATGGCCTGCGCAGTATGCGGATTGTCACCGGTCAGCATGA > 7:259348/1‑149 ACCGACCATGCCCACCCGATGGCCTTGTGCGTACAACGCCTCAATGGTTTTCAGCTTGTCGGCCGGCAACAGGTTGCCCTCGGCGCGGTCGATTCCCACCACGGCAGCAATGGCCTGCGCAGTATGCGGATTGT > 1:187837/1‑134 ACCGACCATGCCCACCCGATGGCCTTGTGCGTACAACGCCTCAATGGTTTTCAGCTTGTCGGCCGGCAACAGGTTGCCCTCGGCGCGGTCGATTCCCACCACGGCAGCAATGGCCTGCGCAGTATGCGGATTGT < 2:187837/134‑1 CGAGGGCAACCTGTTGCCGGCCGACAAGCTGAAAACCATTGAGGCGTTGTACGCACAAGGCCATCGGGTGGGCATGGTCGGTGACGGCATCAACGACGCCCCGGCGCTGGCCCGCGCCGAAATCGGTTTTGCCATGGCTGCTGCCGGCACCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5864297‑5864144‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccgacCATGCCCACCCGATGGCCTTGTGCGTACAACGCCTCAATGGTTTTCAGCTTGTCGGCCGGCAACAGGTTGCCCTCGGCGCGGTCGATTCCCACCACGGCAGCAATGGCCTGCGCAGTATGCGGATTGTCACCGGTCAGCATGA > NC_002947/5864222‑5864364 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |