| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6175795 = | 71 (1.120) | 4 (0.070) | 3/256 | NT | 5.7% | coding (802/1377 nt) | atpD | ATP synthase subunit beta |
| ? | NC_002947 | 6175830 = | 65 (1.060) | coding (767/1377 nt) | atpD | ATP synthase subunit beta | |||||
GTGACGAAGGTAACGACGTTCTGCTGTTCGTCGACAACATCTATCGTTACACCCTGGCCGGTACCGAAGTATCCGCACTGCTGGGCCGTATGCCTTCGGCAGTAGGTTACCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6175908‑6175795‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACGGAACTTCTCGGCCATGGTCAGGCCGGTCAGCGCTACACGCAGACGGTTTCCTGGTGGCTCGTTCATC > NC_002947/6175830‑6175976 GTGACGAAGGTAACGACGTTCTGCTGTTCGTCGACAACATCTATCGTTACACCCTGGCCGGTACCGAAGTATCCGCACTGCTGGGCCGTATGCCTTCGGCAGTAGGTTACCAGC > 3:102751/1‑114GTGACGAAGGTAACGACGTTCTGCTGTTCGTCGACAACATCTATCGTTACACCCTGGCCGGTACCGAAGTATCCGCACTGCTGGGCCGTATGCCTTCGGCAGTAGGTTACCAGC < 4:102751/114‑1 ACTGCTGGGCCGTATGCCTTCGGCAGTAGGTTACCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACGGAACTTCTCGGCCATGGTCAGGCCGGTCAGC > 6:297019/1‑149 ACTGCTGGGCCGTATGCCTTCGGCAGTAGGTTACCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTC < 7:285747/112‑1 ACTGCTGGGCCGTATGCCTTCGGCAGTAGGTTACCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTC > 8:285747/1‑112 CTGCTGGGCCGTATGCCTTCGGCAGTAGGTTACCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACGGAACTTCTCGGCCATGGTCAGGCCGGTCAGCG < 5:297019/149‑1 CAGTGCGGATACTTCGGTACGGGCCGGGGTGTAACTATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACGGAACTTCTCGGCCATGGTCAGGCCGGTGAGCACTACACGCAGACGGTTTGCTGGTGGCTCGTTCATC < 3:66694/148‑1 GTGACGAAGGTAACGACGTTCTGCTGTTCGTCGACAACATCTATCGTTACACCCTGGCCGGTACCGAAGTATCCGCACTGCTGGGCCGTATGCCTTCGGCAGTAGGTTACCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6175908‑6175795‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACGGAACTTCTCGGCCATGGTCAGGCCGGTCAGCGCTACACGCAGACGGTTTCCTGGTGGCTCGTTCATC > NC_002947/6175830‑6175976 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |