New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 6175795 =71 (1.120)4 (0.070) 3/256 NT 5.7% coding (802/1377 nt) atpD ATP synthase subunit beta
?NC_002947 6175830 = 65 (1.060)coding (767/1377 nt) atpD ATP synthase subunit beta

GGCGTCCAAGTGGGCGAAGGTGGTCGCTGGCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACGGAACTTCTCGGCCATGGTCAGGCCGGTCAG  >  NC_002947/6175649‑6175939
                                                                                                                                                   |                                                                                                                                                
gatgaacgagccaccagcaaaccgtctgcgtgtagtgctcaccggcctgaccatggccgagaagttccgtgacgaaggtaacgacgttctgctgttcgtcgacaacatctatagttacaccccggcccgtaccgaagtatccgcactg                                                                                                                                                  <  3:66694‑M1/1‑1 (MQ=255)
 gCGTCCAAGTGGGCGAAGGTGGTCGCTGGCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTg                                                                                                                                               <  6:309925/149‑1 (MQ=255)
   gTCCAAGTGGGCGAAGGTGGTCGCTGGCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGt                                                                                                                                             <  4:108550/149‑1 (MQ=255)
      cAAGTGGGCGAACGTGGTCGCGGGCGACGGGGCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGGACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAAc                                                                                                                                          <  2:245954/149‑1 (MQ=255)
         gTGGGCGAAGGTGGTCGCTGGCGACGGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAAcc                                                                                                                                         >  1:223903/1‑148 (MQ=255)
             gCGAAGGTGGTCGCTGGCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGc                                                                                                                                   >  5:105227/1‑149 (MQ=255)
                  ggtggtCGCTGGCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAg                                                                                                                              <  6:156860/149‑1 (MQ=255)
                      gtCGCTGGCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCa                                                                                                                           >  2:137633/1‑148 (MQ=255)
                        cGCTGGCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATAc                                                                                                                        >  3:342471/1‑149 (MQ=255)
                           tGGCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACTGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGaa                                                                                                                               >  6:75872/1‑139 (MQ=255)
                           tGGCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGaa                                                                                                                               <  5:75872/139‑1 (MQ=255)
                           tGGCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGc                                                                                                                     >  7:27728/1‑149 (MQ=255)
                              cGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCGATTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCca                                                                                                                  <  1:328394/149‑1 (MQ=255)
                               gACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCcag                                                                                                                 <  4:342471/149‑1 (MQ=255)
                               gACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCcag                                                                                                                 >  4:258208/1‑149 (MQ=255)
                               gACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGCGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGcc                                                                                                                    >  4:261010/1‑146 (MQ=255)
                                   gggTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACAGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCcagcag                                                                                                              >  1:236517/1‑149 (MQ=255)
                                   cgctgaccggcctgaccatggccgagaagttccgtgacgaaggtaacgacgttctgctgttcgtcgacaacatctatcgttacaccctggccggtaccgaagtatccgcactGCTGGTAACCTACTGCCGAAGGCATACGGCCcagcag                                                                                                              <  5:297019‑M1/37‑1 (MQ=255)
                                    gctgaccggcctgaccatggccgagaagttccgtgacgaaggtaacgacgttctgctgttcgtcgacaacatctatcgttacaccctggccggtaccgaagtatccgcactGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGt                                                                                                             >  6:297019‑M1/112‑149 (MQ=255)
                                     gtcggtcAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTg                                                                                                            >  3:367984/1‑149 (MQ=255)
                                      tcggtcAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGc                                                                                                           <  7:143986/149‑1 (MQ=255)
                                      tcggtcAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGc                                                                                                           <  1:137633/149‑1 (MQ=255)
                                      tcggtcAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGc                                                                                                           >  2:26232/1‑149 (MQ=255)
                                         gtcAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGa                                                                                                        <  1:26232/149‑1 (MQ=255)
                                            aaGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGcc                                                                                                                    <  8:35396/134‑1 (MQ=255)
                                            aaGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGcc                                                                                                                    >  7:35396/1‑134 (MQ=255)
                                             aGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGCTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGAGGATACt                                                                                                    >  6:30270/1‑149 (MQ=255)
                                              gtcgtcCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACtt                                                                                                   <  1:281483/149‑1 (MQ=255)
                                               tcgtcCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCcag                                                                                                                 <  6:2813/134‑1 (MQ=255)
                                               tcgtcCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCcag                                                                                                                 >  5:2813/1‑134 (MQ=255)
                                                      cAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCg                                                                                           <  3:258208/149‑1 (MQ=255)
                                                         gTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGAt                                                                                                       >  1:94542/1‑134 (MQ=255)
                                                         gTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGAt                                                                                                       <  2:94542/134‑1 (MQ=255)
                                                         gTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGc                                                                                         >  7:157338/1‑148 (MQ=255)
                                                          tACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCa                                                                                       <  8:157338/149‑1 (MQ=255)
                                                             gTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAggg                                                                                    >  2:278242/1‑149 (MQ=255)
                                                               ataCGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCgg                                                                                          <  8:257624/141‑1 (MQ=255)
                                                               ataCGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCgg                                                                                          >  7:257624/1‑141 (MQ=255)
                                                                taCGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGgtg                                                                                  >  1:162466/1‑148 (MQ=255)
                                                                  cGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTaa                                                                               <  1:230200/149‑1 (MQ=255)
                                                                   ggCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAAc                                                                              <  2:223903/149‑1 (MQ=255)
                                                                      cTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGTCAGGGTGTAACGAt                                                                           <  8:27728/149‑1 (MQ=255)
                                                                         tACGGAGGTGATCGAACCTTCCTTGGCGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATa                                                                          <  3:261010/147‑1 (MQ=255)
                                                                         gaaggtaacgacgttctgctgttcgtcgacaacatctatcgttacaccctggccggtaccgaagtatccgcactGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGt                                                                                                             <  7:285747‑M1/38‑1 (MQ=255)
                                                                         gaaggtaacgacgttctgctgttcgtcgacaacatctatcgttacaccctggccggtaccgaagtatccgcactGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGt                                                                                                             >  8:285747‑M1/75‑112 (MQ=255)
                                                                           cagAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGAt                                                                       <  2:236517/146‑1 (MQ=255)
                                                                                gTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCg                                                                                           <  6:264299/123‑1 (MQ=255)
                                                                                gTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCg                                                                                           >  5:264299/1‑123 (MQ=255)
                                                                                gTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTaa                                                                               >  8:326240/1‑135 (MQ=255)
                                                                                gTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTaa                                                                               >  8:210677/1‑135 (MQ=255)
                                                                                gTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTaa                                                                               <  7:326240/135‑1 (MQ=255)
                                                                                gTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTaa                                                                               <  7:210677/135‑1 (MQ=255)
                                                                                gTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTc                                                                 <  4:367984/149‑1 (MQ=255)
                                                                                   aTCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTcga                                                               <  6:105227/148‑1 (MQ=255)
                                                                                    tCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTcgac                                                              >  6:319225/1‑148 (MQ=255)
                                                                                     cGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTcgacg                                                             >  6:168212/1‑148 (MQ=255)
                                                                                     cGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTcgacg                                                             >  6:400587/1‑148 (MQ=255)
                                                                                      gAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGaa                                                           >  8:352124/1‑149 (MQ=255)
                                                                                       aaCCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGaa                                                           >  8:158519/1‑148 (MQ=255)
                                                                                               ttGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAAc                                                  >  2:340924/1‑149 (MQ=255)
                                                                                                     gAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAAcgtcgt                                             <  2:162466/148‑1 (MQ=255)
                                                                                                        gTGCTGCGCTCTTGCAGCACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCGTACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTAcc                                         >  6:117773/1‑149 (MQ=255)
                                                                                                               gcTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCGGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCa                                  >  4:66694/1‑149 (MQ=255)
                                                                                                                 tctTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACg                                >  2:99790/1‑149 (MQ=255)
                                                                                                                   ttGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACgg                               >  1:1027/1‑148 (MQ=255)
                                                                                                                   ttGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACg                                <  7:158519/147‑1 (MQ=255)
                                                                                                                      cAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACGGAACt                           >  2:272247/1‑149 (MQ=255)
                                                                                                                       aGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGAt                                                                       <  3:73375/104‑1 (MQ=255)
                                                                                                                       aGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGAt                                                                       >  4:73375/1‑104 (MQ=255)
                                                                                                                              ccATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACGGAACTTCTCGGc                    >  7:265657/1‑148 (MQ=255)
                                                                                                                                  ctctTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACGGAACTTCTCGGCCATgg               >  3:368171/1‑149 (MQ=255)
                                                                                                                                     ttCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACGGAACTTCTCGGCCATGGt              >  6:57483/1‑147 (MQ=255)
                                                                                                                                      tCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACGGAACTTCTCGGCCATGGTCAg           >  4:213659/1‑149 (MQ=255)
                                                                                                                                       cAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACGGAACTTCTCGGCCATGGTCAgg          >  1:164627/1‑149 (MQ=255)
                                                                                                                                        aGCCAGGGTCGGCTGGTATCCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACGGAACTTCTCGGCCATGGTCAgg          <  2:212990/148‑1 (MQ=255)
                                                                                                                                          ccAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGATCAGCAGAACGTCGTTACCTTCGTCACGGAACTTCTCGGCCATGGTCAGGCCg       <  5:319225/149‑1 (MQ=255)
                                                                                                                                          ccAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACGGAACTTCTCGGCCATGGTCAGGCCg       <  7:352124/149‑1 (MQ=255)
                                                                                                                                               gTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACGGAACTTCTCGGCCATGGTCAGGCCGGTCAg  <  5:30270/149‑1 (MQ=255)
                                                                                                                                                   GCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCAc                                 >  3:102751‑M1/1‑114 (MQ=255)
                                                                                                                                                   GCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCAc                                 <  4:102751‑M1/114‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                
GGCGTCCAAGTGGGCGAAGGTGGTCGCTGGCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACGGAACTTCTCGGCCATGGTCAGGCCGGTCAG  >  NC_002947/6175649‑6175939

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.