New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 400298	68 (1.070)	4 (0.060)	4/258	NT	7.6%	intergenic (+33/‑117)	PP_0333/PP_0334	hypothetical protein/transposase
	?	NC_002947	= 400367	31 (0.500)					intergenic (+102/‑48)	PP_0333/PP_0334	hypothetical protein/transposase

GGACCGCAGCAACTTCAACTACCCGCTGCTGGTGGGTTCCAAGGCGCTGCGCGAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGACCATGAAAAAGCATAGTTCGAAACACGATTCCCTGTCTTCCACTGATGTGGAGCTTTGCACAACCATCTGCGTAGACC  >  NC_002947/400154‑400445                                                                                                                                                  |                                                                                                                                                    ggACCGCAGCAACTTCAACTACCCGCTGCTGGTGGGTTCCAAGGCGCTGCGCGAGTTCAAGGCGGCGGTCACCCCGGCGAAGAAGGTCTCTGCTGGCAAGCCAGGGGGCT‑GAGCTGAAGCGTGCGCCATCAAAGGTAAACGATGGcctc                                                                                                                                                 >  7:273485‑M1/1‑145 (MQ=255)    ccGCAGCAACTTCAACTACCCGCTGCTGGTGGGTTCCAAGGCGCTGCGCGAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGcc                                                                                                                                              >  2:101388/1‑149 (MQ=255)          caACTTCAACTCCCCGCTGCTGGTGGGTTCCAAGGCGCTGCGCGAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCccgcc                                                                                                                                        <  1:57984/149‑1 (MQ=255)           aaCTTCAACTACCCGCTGCTGGTGGGTTCCAAGGCGCTGCGCGAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCccgcc                                                                                                                                        >  3:305713/1‑148 (MQ=255)           aaCTTCAACTACCCGCTGCTGGTGGGTTCCAAGGCGCTGCGCGAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGCGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCccaccg                                                                                                                                       <  1:143292/149‑1 (MQ=255)             cTTCAACTACCCGCTGCTGGTGGGTTCCAAGGCGCTGCGCGAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAg                                                                                                                                     >  4:331433/1‑149 (MQ=255)              ttCAACTACCCGCTGCTGGTGGGTTCCAAGGCGCTGCGCGAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAgg                                                                                                                                    >  7:49946/1‑149 (MQ=255)                 aaCTACCCGCTGCTGGTGGGTTCCAAGGCGCTGCGCGAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGTGGCac                                                                                                                                 >  3:182166/1‑148 (MQ=255)                   cTACCCGCTGCTGGTGGGTTCCAAGGCGCTGCGCGAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATca                                                                                                                               <  3:23021/149‑1 (MQ=255)                    tACCCGCTGCTGGTGGGTTCCAAGGCGCTGCGCGAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGTACTCGCCCCCGCCGAGGCATca                                                                                                                               >  7:130095/1‑148 (MQ=255)                      cccGCTGCTGGTGGGTTCCAAGGCGCTGCGCGAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGtctcgccctcgctgccgttggcttc                                                                                                                            >  1:223378‑M1/1‑124 (MQ=255)                      cccGCTGCTGGTGGGTTCCAAGGCGCTGCGCGAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAg                                                                                                                            >  5:171458/1‑149 (MQ=255)                       ccGCTGCTGGTGGGTTCCAAGGCGCTGCGCGAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGc                                                                                                                                               >  1:285214/1‑129 (MQ=255)                       ccGCTGCTGGTGGGTTCCAAGGCGCTGCGCGAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGc                                                                                                                                               <  2:285214/129‑1 (MQ=255)                             ctgGTGGGTTCCAAGGCGCTGCGCGAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACg                                                                                                                     >  3:231887/1‑149 (MQ=255)                               ggtggGTTGCAAGGCGCTGCGCGAGTTCAATGCGGCGGTCTACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTTCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGTTGGACTCGCCCCCGCCGAGGCATCACAGTGCCACgg                                                                                                                    <  8:130095/148‑1 (MQ=39)                                gtggGTTCCAAGGCGCTGCGCGAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACggtg                                                                                                                  <  3:190312/149‑1 (MQ=255)                                gtggGTTCCAAGGCGCTGCGCGAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACggtg                                                                                                                  <  4:305713/149‑1 (MQ=255)                                 tggGTTCCAAGGCGCTGCGCGAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCTGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACggtgg                                                                                                                 <  8:13364/149‑1 (MQ=255)                                    gTTCCAAGGCGCTGCGCGAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGt                                                                                                                           >  4:193676/1‑136 (MQ=255)                                    gTTCCAAGGCGCTGCGCGAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGt                                                                                                                           <  3:193676/136‑1 (MQ=255)                                    gTTCCAAGGCGCTGCGCGAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGgtgt                                                                                                              >  5:293609/1‑149 (MQ=255)                                    gTTCCAAGGCGCTGCGCGAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGgtgt                                                                                                              >  3:193376/1‑149 (MQ=255)                                     ttCCAAGGCGCTGCGCGAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGtt                                                                                                             >  2:219597/1‑149 (MQ=255)                                     ttCCAAGGCGCTGCGCGAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGtt                                                                                                             >  6:4465/1‑149 (MQ=255)                                       ccAAGGCGCTGCGCGAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTc                                                                                                            >  1:129144/1‑148 (MQ=255)                                        cAAGGCGCTGCGCGAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATTTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCg                                                                                                           >  2:62595/1‑148 (MQ=255)                                         aaGGCGCTGCGCGAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCgaa                                                                                                         <  4:231887/149‑1 (MQ=255)                                         aaGGCGCTGCGCGAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCgaa                                                                                                         <  2:129144/149‑1 (MQ=255)                                           ggCGCTGCGCGAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATCGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCgaag                                                                                                        >  1:36109/1‑148 (MQ=255)                                            gcgcTGCGCGAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGGT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCgaagaa                                                                                                      <  2:329601/149‑1 (MQ=255)                                            gccgcgcgcGAGGTCCACGCGGCCGTCGACCCGGCGCCGCACGGCGATGCCGGCCAGCCAGGGGGCG‑GATCTGAAGCGTGCGCCATACAATGTACTCGAGGGACTCGCCCCCGCCGAGGCAGCACAGGGCCCCGGTGGTGTTCgaagaa                                                                                                      <  8:273485/144‑1 (MQ=12)                                             cgcTGCGCGAGTTCATGGCGGCGGTCAACCGGGCGAAGTAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCTCCGAGGCATCACAGTGCCACGTTGGTGTTCGaagaag                                                                                                     <  6:306175/149‑1 (MQ=38)                                                   gcgAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACg                                                                                               >  1:24865/1‑149 (MQ=255)                                                     gAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACgg                                                                                              >  1:65548/1‑148 (MQ=255)                                                       gTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTCGCAAGCCAGGGTGCT‑GATCTGACGCGTGCGCGATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAg                                                                                           >  5:278616/1‑149 (MQ=255)                                                        ttCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGtctcgccctcgctgccgttggcttcttcgaacaccaccgtggcactgtgatgcctcggc                                                                                          >  3:98952‑M1/1‑90 (MQ=255)                                                              gcggcgGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGc                                                                                    <  6:171458/149‑1 (MQ=255)                                                                    gTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGtctcgccctcgctgccgttggcttcttcgaacaccaccgtggcactgtgatgcctcggcgggggcgagtcc                                                                              <  4:98952‑M1/149‑72 (MQ=255)                                                                     tCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGtctcgccctcgctgccgttggcttcttcgaacaccaccgtggcactgtgatgcctcggcgggggcgagtcca                                                                             <  2:223378‑M1/149‑73 (MQ=255)                                                                        aCCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGACCATg                                                                           >  3:127494/1‑148 (MQ=255)                                                                           cGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGTGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGACCATGaaaa                                                                       <  5:311698/149‑1 (MQ=255)                                                                              cGAAGAAGTTCACTGCTCGCAAGCCAGGGGGCT‑GATCTGAAGCGTGCGCCATACAATGTTATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGACCATGAAAAAGc                                                                    <  6:278616/149‑1 (MQ=255)                                                                                 agaagTTCACTGCTGGCAAGCCAGGGTGCTGGATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGACCATGAAAAAGCa                                                                   >  1:235770/1‑148 (MQ=255)                                                                                      ttCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGACCATGAAAAAGCATAGTTc                                                             >  8:277326/1‑148 (MQ=255)                                                                                             ctgGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGACCATGAAAAAGCATAGTTCGAAaca                                                       <  3:331433/147‑1 (MQ=255)                                                                                             ctgGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCAAGGTGGTGTTCGAAGAAGCCACCGGCAGCGAGGGCGAGACCATGAAAAAGCATAGTTCGATACACg                                                     >  7:144097/1‑149 (MQ=255)                                                                                              tgGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGACCATGAAAAAGCATAGTTCGAAACACGa                                                    >  5:246296/1‑149 (MQ=255)                                                                                                gCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGACCATGAAAAAGCATAGTTCGAAACACGAtt                                                  >  7:89474/1‑149 (MQ=255)                                                                                                gCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGACCATGAAAAAGCATAGTTCGAAACACGAt                                                   <  7:55861/148‑1 (MQ=255)                                                                                                  aaGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGAcca                                                                             >  4:182665‑M2/1‑117 (MQ=255)                                                                                                  aaGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGAcca                                                                             <  3:182665‑M2/120‑4 (MQ=255)                                                                                                  aaGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGACCATGAAAAAGc                                                                    >  5:227168/1‑129 (MQ=255)                                                                                                  aaGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGACCATGAAAAAGc                                                                    <  6:227168/129‑1 (MQ=255)                                                                                                  aaGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGACCATGAAAAAGCATAGTTCGAAACACGATTcc                                                >  7:93970/1‑149 (MQ=255)                                                                                                  aaGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGACCATGAAAAAGCATAGTTCGAAACACGATTcc                                                >  6:171565/1‑149 (MQ=255)                                                                                                   aGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGACCATGAAAAAGCATAGTTCGACACACGATTccc                                               >  5:234629/1‑149 (MQ=255)                                                                                                    gCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGACCATGAAAAAGCATAGTTCGAAACACGATTCCCt                                              <  8:49946/149‑1 (MQ=255)                                                                                                     ccAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGACCATGAAAAAGCATAGTTCGAAACACGATTCCCTg                                             >  4:360913/1‑149 (MQ=255)                                                                                                       aGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGACCATAAAAAAGCATAGTTCGAAACACGATTCCCTGTc                                           <  2:65548/149‑1 (MQ=255)                                                                                                        gggTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGACCATGAAAAAGCATAGTTCGAAACACGATTCCCTGTCt                                          >  5:381693/1‑149 (MQ=255)                                                                                                             cT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGACCATGAAAAAGCATAGTTCGAAACACGATTCCCTGTCTTCCAc                                     <  8:89474/149‑1 (MQ=255)                                                                                                              t‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGACCATGAAAAAGCATAGTTCGAAACACGATTCCCTGTCTTCCACt                                    >  1:83461/1‑149 (MQ=255)                                                                                                                      aaGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGACCATGAAAAAGCATAGTTCGAAACACGATTCCCTGTCTTCCACTGa                                  <  4:127494/144‑1 (MQ=255)                                                                                                                      aaGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGACCATGAAAAAGCATAGTTCGAAACACGATTCCCTGTCTTCCACTGAt                                 <  5:4465/145‑1 (MQ=255)                                                                                                                           tGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGACCATGAAAAAGCATAGTTCGAAACACGATTCCCTGTCTTCCACTGATGTGGAGCtt                        >  4:36391/1‑149 (MQ=39)                                                                                                                            gcgcCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGACCATGAAAAAGCATAGTTCGAAACACGATTCCCTGTCTTCCACTGATGTGGAGCttt                       <  6:246296/149‑1 (MQ=38)                                                                                                                             cgcCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGACCATGAAAAAGCATAGTTCGAAACACGATTCCCTGTCTTCCACTGATGTGGAGCTTTg                      <  2:174194/149‑1 (MQ=38)                                                                                                                             cgcCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGACCATGAAAAAGCATAGTTCGAAACACGATTCCCTGTCTTCCACTGATGTGGAGCTTTg                      <  2:24865/149‑1 (MQ=38)                                                                                                                              gcCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGACCATGaaaaa                                                                      <  6:70536/100‑1 (MQ=40)                                                                                                                              gcCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGACCATGaaaaa                                                                      >  5:70536/1‑100 (MQ=40)                                                                                                                              gcCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGACCATGAAAAAGCATAGTTCGAAACACGATTCCCTGTCTTCCACTGATGTGGAGCTTTGc                     <  1:62595/149‑1 (MQ=37)                                                                                                                               ccATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGACCATGAAAAAGCATAGTTCGAAACACGATTCCCTGTCTTCCACTGATGTGGAGCTTTGca                    <  6:304852/149‑1 (MQ=35)                                                                                                                                 aTACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGACCATGAAAAAGCATAGTTCGAAACACGATTCCCTGTCTTCCACTGATGTgg                             >  8:333610/1‑138 (MQ=34)                                                                                                                                     aaTGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGACCATGAAAAAGCATAGTTCGAAACACGATTCCCTGTCTTCCACTGATGTGGAGCTTTGCACAACCa              >  2:186961/1‑149 (MQ=31)                                                                                                                                                tGGtctcgccctcgctgccgttggcttcttcgaacaccaccgtggcactgtgatgcctcggcgggggcgagtccatcgattacattgtatggcgcacgcttcagatcagcaccctggctt                                <  3:182665‑M1/120‑118 (MQ=255)                                                                                                                                                tGGtctcgccctcgctgccgttggcttcttcgaacaccaccgtggcactgtgatgcctcggcgggggcgagtccatcgattacattgtatggcgcacgcttcagatcagcaccctggctt                                >  4:182665‑M1/1‑3 (MQ=255)                                                                                                                                                tGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGAccatcgattacattgtatggcgcacgcttcagatcagcaccctggcttgccagcagtgaacttcttcgccgggttga   <  2:223378‑M2/149‑78 (MQ=255)                                                                                                                                                 ggACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGAccatcgattacattgtatggcgcacgcttcagatcagcaccctggcttgccagcagtgaacttcttcgccgggttgac  <  4:98952‑M2/149‑79 (MQ=255)                                                                                                                                                  |                                                                                                                                                    GGACCGCAGCAACTTCAACTACCCGCTGCTGGTGGGTTCCAAGGCGCTGCGCGAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCT‑GATCTGAAGCGTGCGCCATACAATGTAATCGATGGACTCGCCCCCGCCGAGGCATCACAGTGCCACGGTGGTGTTCGAAGAAGCCAACGGCAGCGAGGGCGAGACCATGAAAAAGCATAGTTCGAAACACGATTCCCTGTCTTCCACTGATGTGGAGCTTTGCACAACCATCTGCGTAGACC  >  NC_002947/400154‑400445

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.