| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | NC_002947 | 1,990,144 | Δ10 bp | 71.4% | coding (1394‑1403/4812 nt) | PP_1780 → | mannosyltransferase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1990143 | 16 (0.250) | 41 (0.650) | 35/264 | NT | 71.4% | coding (1393/4812 nt) | PP_1780 | mannosyltransferase |
| ? | NC_002947 | 1990154 = | 17 (0.270) | coding (1404/4812 nt) | PP_1780 | mannosyltransferase | |||||
ATATCCCAAAGCGCCGCTGCTGCCTGAAGGCTATTACCTGAAGGACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTTGTTCGACATGCTGGAGGGCAAGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAATGTCATCGAGATACCAGCCTTCCAGCAGCGGCTGACAAATGCAATAGGCCAACCGTTGGATGAAGCGTTGGA > NC_002947/1990001‑1990276 | atatCCCAAAGCGCCGCTGCTGCCTGAAGGCTATTACCTGAAGGACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctg > 1:188575‑M1/1‑143 (MQ=255) tatCCCAAAGCGCCGCTGCTGCCTGAAGGCTATTACCTGAAGGACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggag > 3:317882‑M1/1‑142 (MQ=255) tCCCAAAGCGCCGCTGCTGCCTAAAGGCTATTACCTGAAGGACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTTGTTCGAc < 1:261893/148‑1 (MQ=255) cccAAAGCGCCGCTGCTGCCTGAAGGCTATTACCTGAAGGACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggaggg > 1:149514‑M1/1‑139 (MQ=255) cccAAAGCGCCGCTGCTGCCTGAAGGCTATTACCTGAAGGACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggaggg > 2:112529‑M1/1‑139 (MQ=255) ccAAAGCGCCGCTGCTGCCTGAAGGCTATTACCTGAAGGACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggc > 4:246797‑M1/1‑138 (MQ=255) ccAAAGCGCCGCTGCTGCCTGAAGGCTATTACCTGAAGGACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggc > 3:376781‑M1/1‑138 (MQ=255) cAAAGCGCCGCTGCTGCCTGAAGGCTATTACCTGAAGGACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggc > 3:377899‑M1/1‑137 (MQ=255) cAAAGCGCCGCTGCTGCCTGAAGGCTATTACCTGAAGGACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggc > 3:233440‑M1/1‑137 (MQ=255) aaaGCGCCGCTGCTGCCTGAAGGCTATTACCTGAAGGACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggcaag > 6:351258‑M1/1‑136 (MQ=255) cgccgcTGCTGCCTGAAGGCTATTACCTGAAGGACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTTGTTCGACATGCTGGAg < 7:204384/149‑1 (MQ=255) gccgcTGCTGCCTGAAGGCTATTACCTGAAGGACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggcaagctcgc < 2:343370‑M1/149‑19 (MQ=255) ctgctgCCTGAAGGCTATTACCTGAAGGACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggcaagctcgcgttc < 5:144128‑M1/149‑23 (MQ=255) ccTGAAGGCTATTACCTGAAGGACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggcaagctcgcgttccagc < 4:233440‑M1/147‑27 (MQ=255) cTGAAGGCTATTACCTGAAGGACGAGGCTGTCGCACCGGCGTTTAATGCAGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTTGTTCGACATGCTGGGGGGCAAGCTcgcg > 6:194053/1‑149 (MQ=255) tGAAGGCTATTACCTGAAGGACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggcaagctcgcgttccagcccta > 4:64586‑M1/1‑119 (MQ=255) ggCTATTACCTGAAGGACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggcaagctcgcgttccagccctaccat < 5:351258‑M1/149‑35 (MQ=255) gCTATTACCTGAAGGACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggcaagctcgcgttccagccctaccatg < 8:91311‑M1/149‑36 (MQ=255) gCTATTACCTGAAGGACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggcaagctcgcgttccagccctaccatg < 3:64586‑M1/149‑36 (MQ=255) ccTGAAGGACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggcaagctcgcgttccagccctaccatggtaagg < 2:188575‑M1/148‑42 (MQ=255) ccTGAAGGACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTTGTTCGACATGCTGGAGGGCAAGCTCGCGTTCCAGCCCTAc < 2:363496/148‑1 (MQ=255) cTGAAGGACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggcaagctcgcgttccagccctaccatggtaaggcg > 5:30724‑M1/1‑106 (MQ=255) cTGAAGGACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTTGTTCGACATGCTGGAGGGCAAGCTCGCGTTCCAGCCCTAcc < 5:102923/148‑1 (MQ=255) tGAAGGACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgct > 3:166805‑M1/1‑105 (MQ=255) tGAAGGACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgct < 4:166805‑M1/108‑4 (MQ=255) gAAGGACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTTGTTCGACATGCTGGAGGGCAAGCTCGCGTTCCAGCCCTACCATg > 7:352526/1‑149 (MQ=255) aaGGACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGAGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTTGTTCGACATGCTGGAGGGCAAGCTCGCGTTCCAGCCCTACCATgg > 1:87142/1‑149 (MQ=255) ggACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggcaagctcgcgttccagccctaccatggtaaggcgtacga < 8:319996‑M1/149‑49 (MQ=255) ggACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggcaagctcgcgttccag > 2:32098‑M1/1‑101 (MQ=255) ggACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggcaagctcgcgttccag < 1:32098‑M1/126‑26 (MQ=255) gACGAGGCTGTCGCACCGCCGATTAATGCCGTGCGGATCCCGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGAGTTGTTCGACATGCTGGAGGGCAAGCTCCCGTTCCAGCACTACCATGGt > 2:314531/1‑147 (MQ=255) cGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggcaagctcgcgttccagccctaccatggtaaggcgtacgacaa > 4:183181‑M1/1‑98 (MQ=255) gAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggcaagctcgcgttccagccctaccatggtaaggcgtacgacaat < 3:246797‑M1/149‑53 (MQ=255) gAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggcaagctcgcgttccagccctaccatggtaaggcgtacgacaat > 2:189058‑M1/1‑97 (MQ=255) tCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggcaagctcgcgttccagccctaccatggtaaggcgtacgacaatgtcatc < 4:317882‑M1/148‑59 (MQ=255) tCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggcaagctcgcgttccagccctaccatggtaaggcgtacgacaatgtcatc < 7:309354‑M1/148‑59 (MQ=255) tttAATGCCGTGCTGATCAGGTTGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTTGTTCGACATGCTGGAGGGCAAGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAATGTCATCga < 8:99927/149‑1 (MQ=255) tttAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggcactgctcgcgttccagccctaccatggtaaggcgtacgacaatgtcatcgagataccagc < 1:112529‑M1/149‑71 (MQ=255) aTGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggcaagctcgcgttccagccctaccatggtaaggcgtacgacaatgtcatcgagataccagccttc < 1:82490‑M1/148‑74 (MQ=255) cGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggcaagctcgcgttccagccctaccatggtaaggcgtacgacaat > 1:203299‑M1/1‑71 (MQ=255) cGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggcaagctcgcgttccagccctaccatggtaaggcgtacgacaat < 2:203299‑M1/123‑53 (MQ=255) aTCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggcaagctcgcgttccagccctaccatggtaaggcgtacgacaatgtcatcgagataccagccttccagcagcggct > 3:242957‑M1/1‑64 (MQ=255) cACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggcaagctcgcgttccagccctaccatggtaaggcgtacgacaatgtcatcgagataccagccttccagcagcggctga < 4:377899‑M1/148‑87 (MQ=255) ggCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggcaagctcgcgttccagccctaccatggtaaggcgtacgacaatgtcatcgagataccagccttccagcagcggctgacaaatg < 1:189058‑M1/149‑93 (MQ=255) ggCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggcaagctcgcgttccagccctaccatggtaaggcgtacgacaatgtcatcgagactaccagccttccagcagcggctgacaaat < 1:229905‑M1/149‑93 (MQ=255) aaGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggcaagctcgcgttccagccctaccatggtaaggcgtacgacaatgtcatcgagataccagccttccagcagcggctgacaaatgcaataggcc < 4:376781‑M1/149‑102 (MQ=255) aaGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggcaagctcgcgttccagccctaccatggtaaggcgtacgacaatgtcatcgagataccagccttccagcagcggctgacaa < 1:149807‑M1/137‑90 (MQ=255) aaGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggcaagctcgcgttccagccctaccatggtaaggcgtacgacaatgtcatcgagataccagccttccagcagcggctgacaa > 2:149807‑M1/1‑48 (MQ=255) aTTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTTGTTCGACATGCTGGAGGGCAAGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAATGTCATCGAGATACCAGCCTTCCAGCAGCGGc < 2:119301/135‑1 (MQ=255) aTTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTTGTTCGACATGCTGGAGGGCAAGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAATGTCATCGAGATACCAGCCTTCCAGCAGCGGc > 1:119301/1‑135 (MQ=255) ttACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggcaagctcgcgttccagccctaccatggtaaggcgtacgacaatgtcatcgagataccagccttccagcagcggctgacaaatgcaataggccaaccgtt < 6:30724‑M1/149‑109 (MQ=255) cTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggcaagctcgcgttccagccctaccatgtaaggcgtacgacaatgtcatcgagataccagccttccagcagcggctgacaaatgcaataggccaaccgttggatgaag > 4:128648‑M1/1‑34 (MQ=255) cGCCATCGTCAACCGCGGCCTGGGTGTGGCGTTGTTCGACATGCTGGAGGGCAAGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAATGTCATCGAGATACCAGCCTTCCAGCAGCGGCTGACAAATGCAATAGGCCAACCGt > 5:85137/1‑149 (MQ=255) ccATCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggcaagctcgcgttccagccctaccatggtaaggcgtacgacaatgtcatcgagataccagccttccagcagcggctgacaaatgcaataggccaaccgttggatgaagcgt > 4:339793‑M1/1‑30 (MQ=255) aTCGTCAACCGCGGCCTGGGTGTGGCGTgctggagggcaagctcgcgttccagccctagcatggtaaggcgtacgacaatgtcatcgagataccagccttccagcagcggctgacaaatgcaataggccaaccgttggatgaagcgttg < 4:242957‑M1/149‑122 (MQ=255) gTCAACCGCGGCCTGGGTGTGGCGTTGTTCGACATGCTGGAGGGCAAGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAATGTCATCGAGATACCAGCCTTCCAGCAGCGGCTGACAAATGCAATAGGCCAACCGTTGGATGa < 2:87142/149‑1 (MQ=255) tCAACCGCGGCCTGGGTGTGGCGTTGTTCGACATGCTGGAGGGCAAGCTCGCGTTCCAGCCCTACCATGGTAAGGCTTACGACAATGTCATCGAGATACCAGCCTTCCAGCAGCGGCTGACAAATGCAATAGGCCAACCGTTGGATg > 4:60893/1‑147 (MQ=255) cgcgGCCTGGGTGTGGCGTTGTTCGACATGCTGGGGGGCAAGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAATGTCATCGAGATACCAGCCTTCCAGCAGCGGCTGACAAATGCAATAGGCCAACCGTTGGATGAAGCGtt < 5:194053/149‑1 (MQ=255) cgcgGCCTGGGTGTGGCGTTGTTCGACATGCTGGAGGGCAAGCTCGCGTTCCAGCCCTACAATGGTAAGGCGTACGACAATGTCATCGAGATACCAGCCTTCCAGCAGAGGCTGACAAATGCAATAGGCCAACCGTTGGATGAAGCGtt > 6:147618/1‑149 (MQ=255) ggCCTGGGTGTGGCGTgctggagggcaagctcgcgttccagccctaccatggtaaggcgtacgacaatgtcatcgagataccagccttccagcagcggctgacaaatgcaataggccaaccgttggatgaagcgttggaaggggaagtg < 8:50577‑M1/149‑134 (MQ=255) gCGTTGTTCGACATGCTGGAGGGCAAGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAATGTCATCGAGATACCAGCCTTCCAGCAGCGGCTGACAAATGCAATAGGc < 1:80187/114‑1 (MQ=255) gCGTTGTTCGACATGCTGGAGGGCAAGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAATGTCATCGAGATACCAGCCTTCCAGCAGCGGCTGACAAATGCAATAGGc > 2:80187/1‑114 (MQ=255) | ATATCCCAAAGCGCCGCTGCTGCCTGAAGGCTATTACCTGAAGGACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTTGTTCGACATGCTGGAGGGCAAGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAATGTCATCGAGATACCAGCCTTCCAGCAGCGGCTGACAAATGCAATAGGCCAACCGTTGGATGAAGCGTTGGA > NC_002947/1990001‑1990276 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |