| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | NC_002947 | 1,990,144 | Δ10 bp | 71.4% | coding (1394‑1403/4812 nt) | PP_1780 → | mannosyltransferase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1990143 | 16 (0.250) | 41 (0.650) | 35/264 | NT | 71.4% | coding (1393/4812 nt) | PP_1780 | mannosyltransferase |
| ? | NC_002947 | 1990154 = | 17 (0.270) | coding (1404/4812 nt) | PP_1780 | mannosyltransferase | |||||
GCGCCGCTGCTGCCTGAAGGCTATTACCTGAAGGACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTTGTTCGACATGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAATGTCATCGAGA‑TACCAGCCTTCCAGCAGCGGCTGACAAATGCAATAGGCCAACCGTTGGATGAAGCGTTGGAAGGGGAAGTGCTGTCGATTGTTCAT > NC_002947/1990011‑1990301 | atatcccaaagcgccgctgctgcctgaaggctattacctgaaggacgaggctgtcgcaccggcgtttaatgccgtgcggatcacggggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTg > 1:188575‑M2/144‑147 (MQ=255) tatcccaaagcgccgctgctgcctgaaggctattacctgaaggacgaggctgtcgcaccggcgtttaatgccgtgcggatcacggggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAg > 3:317882‑M2/143‑149 (MQ=255) cgccgcTGCTGCCTGAAGGCTATTACCTGAAGGACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTTGTTCGACATGCTGGAg < 7:204384/149‑1 (MQ=255) cccaaagcgccgctgctgcctgaaggctattacctgaaggacgaggctgtcgcaccggcgtttaatgccgtgcggatcacggggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAggg > 1:149514‑M2/140‑148 (MQ=255) cccaaagcgccgctgctgcctgaaggctattacctgaaggacgaggctgtcgcaccggcgtttaatgccgtgcggatcacggggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAggg > 2:112529‑M2/140‑148 (MQ=255) ccaaagcgccgctgctgcctgaaggctattacctgaaggacgaggctgtcgcaccggcgtttaatgccgtgcggatcacggggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGc > 3:376781‑M2/139‑148 (MQ=255) ccaaagcgccgctgctgcctgaaggctattacctgaaggacgaggctgtcgcaccggcgtttaatgccgtgcggatcacggggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGc > 4:246797‑M2/139‑148 (MQ=255) caaagcgccgctgctgcctgaaggctattacctgaaggacgaggctgtcgcaccggcgtttaatgccgtgcggatcacggggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGc > 3:233440‑M2/138‑147 (MQ=255) caaagcgccgctgctgcctgaaggctattacctgaaggacgaggctgtcgcaccggcgtttaatgccgtgcggatcacggggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGc > 3:377899‑M2/138‑147 (MQ=255) aaagcgccgctgctgcctgaaggctattacctgaaggacgaggctgtcgcaccggcgtttaatgccgtgcggatcacggggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGCA‑Ag > 6:351258‑M2/137‑149 (MQ=255) gccgctgctgcctgaaggctattacctgaaggacgaggctgtcgcaccggcgtttaatgccgtgcggatcacggggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGCA‑AGCTcgc < 2:343370‑M2/18‑1 (MQ=255) cTGAAGGCTATTACCTGAAGGACGAGGCTGTCGCACCGGCGTTTAATGCAGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTTGTTCGACATGCTGGGGGGCA‑AGCTcgcg > 6:194053/1‑149 (MQ=255) ctgctgcctgaaggctattacctgaaggacgaggctgtcgcaccggcgtttaatgccgtgcggatcacggggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGCA‑AGCTCGCGTTc < 5:144128‑M2/22‑1 (MQ=255) cctgaaggctattacctgaaggacgaggctgtcgcaccggcgtttaatgccgtgcggatcacggggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGCA‑AGCTCGCGTTCCAGc < 4:233440‑M2/26‑1 (MQ=255) tgaaggctattacctgaaggacgaggctgtcgcaccggcgtttaatgccgtgcggatcacggggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTa > 4:64586‑M2/120‑149 (MQ=255) ccTGAAGGACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTTGTTCGACATGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTAc < 2:363496/148‑1 (MQ=255) cTGAAGGACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTTGTTCGACATGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTAcc < 5:102923/148‑1 (MQ=255) ggctattacctgaaggacgaggctgtcgcaccggcgtttaatgccgtgcggatcacggggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCAt < 5:351258‑M2/34‑1 (MQ=255) gctattacctgaaggacgaggctgtcgcaccggcgtttaatgccgtgcggatcacggggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATg < 8:91311‑M2/35‑1 (MQ=255) gctattacctgaaggacgaggctgtcgcaccggcgtttaatgccgtgcggatcacggggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATg < 3:64586‑M2/35‑1 (MQ=255) gAAGGACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTTGTTCGACATGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATg > 7:352526/1‑149 (MQ=255) aaGGACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGAGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTTGTTCGACATGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATgg > 1:87142/1‑149 (MQ=255) gACGAGGCTGTCGCACCGCCGATTAATGCCGTGCGGATCCCGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGAGTTGTTCGACATGCTGGAGGGCA‑AGCTCCCGTTCCAGCACTACCATGGt > 2:314531/1‑147 (MQ=255) cctgaaggacgaggctgtcgcaccggcgtttaatgccgtgcggatcacggggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATGGTAAgg < 2:188575‑M2/41‑1 (MQ=255) ctgaaggacgaggctgtcgcaccggcgtttaatgccgtgcggatcacggggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATGGTAAGGCg > 5:30724‑M2/107‑149 (MQ=255) tgaaggacgaggctgtcgcaccggcgtttaatgccgtgcggatcacggggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCt > 3:166805‑M2/106‑108 (MQ=255) tgaaggacgaggctgtcgcaccggcgtttaatgccgtgcggatcacggggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCt < 4:166805‑M2/3‑1 (MQ=255) ggacgaggctgtcgcaccggcgtttaatgccgtgcggatcacggggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGCA‑AGCTCGCGTTCCAg > 2:32098‑M2/102‑126 (MQ=255) ggacgaggctgtcgcaccggcgtttaatgccgtgcggatcacggggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGCA‑AGCTCGCGTTCCAg < 1:32098‑M2/25‑1 (MQ=255) ggacgaggctgtcgcaccggcgtttaatgccgtgcggatcacggggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGa < 8:319996‑M2/48‑1 (MQ=255) cgaggctgtcgcaccggcgtttaatgccgtgcggatcacggggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACaa > 4:183181‑M2/99‑149 (MQ=255) gaggctgtcgcaccggcgtttaatgccgtgcggatcacggggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAAt > 2:189058‑M2/98‑149 (MQ=255) gaggctgtcgcaccggcgtttaatgccgtgcggatcacggggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAAt < 3:246797‑M2/52‑1 (MQ=255) tcgcaccggcgtttaatgccgtgcggatcacggggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAATGTCATc < 4:317882‑M2/58‑1 (MQ=255) tcgcaccggcgtttaatgccgtgcggatcacggggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAATGTCATc < 7:309354‑M2/58‑1 (MQ=255) tttAATGCCGTGCTGATCAGGTTGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTTGTTCGACATGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAATGTCATCga < 8:99927/149‑1 (MQ=255) tttaatgccgtgcggatcacggggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGCACTGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAATGTCATCGAGA‑TACCAGc < 1:112529‑M2/70‑1 (MQ=255) atgccgtgcggatcacggggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAATGTCATCGAGA‑TACCAGCCTTc < 1:82490‑M2/73‑1 (MQ=255) cgtgcggatcacggggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAAt > 1:203299‑M2/72‑123 (MQ=255) cgtgcggatcacggggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAAt < 2:203299‑M2/52‑1 (MQ=255) atcacggggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAATGTCATCGAGA‑TACCAGCCTTCCAGCAGCGGCt > 3:242957‑M2/65‑148 (MQ=255) cacggggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAATGTCATCGAGA‑TACCAGCCTTCCAGCAGCGGCTGa < 4:377899‑M2/86‑1 (MQ=255) ggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAATGTCATCGAGACTACCAGCCTTCCAGCAGCGGCTGACAAAt < 1:229905‑M2/92‑1 (MQ=255) ggcatatcgaaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAATGTCATCGAGA‑TACCAGCCTTCCAGCAGCGGCTGACAAATg < 1:189058‑M2/92‑1 (MQ=255) aTTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTTGTTCGACATGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAATGTCATCGAGA‑TACCAGCCTTCCAGCAGCGGc < 2:119301/135‑1 (MQ=255) aTTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTTGTTCGACATGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAATGTCATCGAGA‑TACCAGCCTTCCAGCAGCGGc > 1:119301/1‑135 (MQ=255) aaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAATGTCATCGAGA‑TACCAGCCTTCCAGCAGCGGCTGACaa > 2:149807‑M2/49‑137 (MQ=255) aaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAATGTCATCGAGA‑TACCAGCCTTCCAGCAGCGGCTGACaa < 1:149807‑M2/89‑1 (MQ=255) aaggccattacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAATGTCATCGAGA‑TACCAGCCTTCCAGCAGCGGCTGACAAATGCAATAGGcc < 4:376781‑M2/101‑1 (MQ=255) cGCCATCGTCAACCGCGGCCTGGGTGTGGCGTTGTTCGACATGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAATGTCATCGAGA‑TACCAGCCTTCCAGCAGCGGCTGACAAATGCAATAGGCCAACCGt > 5:85137/1‑149 (MQ=255) ttacagcctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAATGTCATCGAGA‑TACCAGCCTTCCAGCAGCGGCTGACAAATGCAATAGGCCAACCGtt < 6:30724‑M2/108‑1 (MQ=255) gTCAACCGCGGCCTGGGTGTGGCGTTGTTCGACATGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAATGTCATCGAGA‑TACCAGCCTTCCAGCAGCGGCTGACAAATGCAATAGGCCAACCGTTGGATGa < 2:87142/149‑1 (MQ=255) tCAACCGCGGCCTGGGTGTGGCGTTGTTCGACATGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATGGTAAGGCTTACGACAATGTCATCGAGA‑TACCAGCCTTCCAGCAGCGGCTGACAAATGCAATAGGCCAACCGTTGGATg > 4:60893/1‑147 (MQ=255) ctcgccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCAT‑GTAAGGCGTACGACAATGTCATCGAGA‑TACCAGCCTTCCAGCAGCGGCTGACAAATGCAATAGGCCAACCGTTGGATGAAg > 4:128648‑M2/35‑149 (MQ=255) ccatcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAATGTCATCGAGA‑TACCAGCCTTCCAGCAGCGGCTGACAAATGCAATAGGCCAACCGTTGGATGAAGCGt > 4:339793‑M2/31‑149 (MQ=255) cgcgGCCTGGGTGTGGCGTTGTTCGACATGCTGGGGGGCA‑AGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAATGTCATCGAGA‑TACCAGCCTTCCAGCAGCGGCTGACAAATGCAATAGGCCAACCGTTGGATGAAGCGtt < 5:194053/149‑1 (MQ=255) cgcgGCCTGGGTGTGGCGTTGTTCGACATGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACAATGGTAAGGCGTACGACAATGTCATCGAGA‑TACCAGCCTTCCAGCAGAGGCTGACAAATGCAATAGGCCAACCGTTGGATGAAGCGtt > 6:147618/1‑149 (MQ=255) atcgtcaaccgcggcctgggtgtggcgtGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTAGCATGGTAAGGCGTACGACAATGTCATCGAGA‑TACCAGCCTTCCAGCAGCGGCTGACAAATGCAATAGGCCAACCGTTGGATGAAGCGTTg < 4:242957‑M2/121‑1 (MQ=255) ggcctgggtgtggcgtGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAATGTCATCGAGA‑TACCAGCCTTCCAGCAGCGGCTGACAAATGCAATAGGCCAACCGTTGGATGAAGCGTTGGAAGGGGAAGTg < 8:50577‑M2/133‑1 (MQ=255) gCGTTGTTCGACATGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAATGTCATCGAGA‑TACCAGCCTTCCAGCAGCGGCTGACAAATGCAATAGGc < 1:80187/114‑1 (MQ=255) gCGTTGTTCGACATGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAATGTCATCGAGA‑TACCAGCCTTCCAGCAGCGGCTGACAAATGCAATAGGc > 2:80187/1‑114 (MQ=255) cATGCTGGAGGGCA‑AGCGCGCGTTCCAGCCCTACCATGGTATGGCGTACGACAATGTCATCGAGA‑TACCAGCCTTCCAGCAGCGGCTGACAAATGCAATAGGCCAACCGTTGGATGAAGCGTTGGAAGGGGAAGTGCTGTCGATTGTtc < 8:352526/149‑1 (MQ=255) gCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAATGTCATCGAGA‑TACCAGCCTTCCAGCAGCGGCTGACAAATGCAATAGGCCAACCGTTGGATGAAGCGTTGGAAGGGGAAGTGCTGTCGATTGTtcat > 1:86277/1‑148 (MQ=255) | GCGCCGCTGCTGCCTGAAGGCTATTACCTGAAGGACGAGGCTGTCGCACCGGCGTTTAATGCCGTGCGGATCACGGGGCATATCGAAGGCCATTACAGCCTCGCCATCGTCAACCGCGGCCTGGGTGTGGCGTTGTTCGACATGCTGGAGGGCA‑AGCTCGCGTTCCAGCCCTACCATGGTAAGGCGTACGACAATGTCATCGAGA‑TACCAGCCTTCCAGCAGCGGCTGACAAATGCAATAGGCCAACCGTTGGATGAAGCGTTGGAAGGGGAAGTGCTGTCGATTGTTCAT > NC_002947/1990011‑1990301 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |