| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | NC_002947 | 2,306,316 | Δ85 bp | 70.2% | coding (157‑241/1719 nt) | PP_2028 ← | TPR repeat‑containing protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2306315 | 15 (0.240) | 33 (0.560) | 32/248 | NT | 70.2% | coding (242/1719 nt) | PP_2028 | TPR repeat‑containing protein |
| ? | NC_002947 | 2306401 = | 14 (0.240) | coding (156/1719 nt) | PP_2028 | TPR repeat‑containing protein | |||||
CGGTGTTCAAGCAGGTCGAGGATCTTGCGCCGGGCCTGTTCCAGGCGGTTGGGCGGGCTGTCCTCGGCGAGCATTTGCGGGGTCAGTTCGAGCAGGATCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCAGCTGGGCCCGAGCAGCGCCAGGATCACCAGTAACCAGGCAAGGCCCAGCGCCACCCACGGCAGTTTGCTGGTGCTGCCGCTGCCGCCACCCAGCAGTACACCGTGGAAGGCTGGCGGCAGAATCATCTGCCAGCGCCCGGCGCGCTT > NC_002947/2306171‑2306463 | cggTGTTCAAGCAGGTCGAGGATCTTGCGCCGGGCCTGTTCCAGGCGGTTGGGCGGGCTGTCCTCGGCGAGCATTTGCGGGGTCAGTTCGAGCAGGATCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCgcca < 1:301408‑M1/149‑5 (MQ=255) gCAGGTCGAGGATCTTGCGCCGGGCCTGTTCCAGGCGGTTGGGCGGGCTGTCCTCGGCGAGCATTTGCGGGGTCAGTTCGAGCAGGATCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCgccacccagcagta < 7:300695‑M1/149‑15 (MQ=255) gATCTTGCGCCGGGCCTGTTCCAGGCGGTTGGGCGGGCTGTCCTCGGCGAGCATTTGCGGGGTCAGTTCGAGCAGGATCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCgccacccagcagtacaccgtggaa < 4:96244‑M1/149‑25 (MQ=255) gcCGGGCCTGTTCCAGGCGGTTGGGCGGGCTGTCCTCGGCGAGCATTTGCGGGGTCAGTTCGAGCAGGATCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCAGCTGGGCCCGAGCAGCGCCAg < 1:199539/139‑1 (MQ=255) gcCGGGCCTGTTCCAGGCGGTTGGGCGGGCTGTCCTCGGCGAGCATTTGCGGGGTCAGTTCGAGCAGGATCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCAGCTGGGCCCGAGCAGCGCCAg > 2:199539/1‑139 (MQ=255) cGGGCCTGTTCCAGGCGGTTGGGCGGGCTGTCCTCGGCGAGCATTTGCGGGGTCAGTTCGAGCAGGATCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCgccacccagcagtacaccgtggaaggctggcggc < 5:162193‑M1/149‑35 (MQ=255) cGGGCCTGTTCCAGGCGGTTGGGCGGGCTGTCCTCGGCGAGCATTTGCGGGGTCAGTTCGAGCAGGATCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCgccacccagcagtacaccgtgg > 4:224591‑M1/1‑115 (MQ=255) cGGGCCTGTTCCAGGCGGTTGGGCGGGCTGTCCTCGGCGAGCATTTGCGGGGTCAGTTCGAGCAGGATCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCgccacccagcagtacaccgtgg < 3:224591‑M1/137‑23 (MQ=255) gggCCTGTTCCAGGCGGTTGGGCGGGCTGTCCTCGGCGAGCATTTGCGGGGTCAGTTCGAGCAGGATCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCgccacccagcagtacaccgtggaaggctggcgg > 4:335134‑M1/1‑114 (MQ=255) ccTGTTCCAGGCGGTTGGGCGGGCTGTCCTCGGCGAGCATTTGCGGGGTCAGTTCGAGCAGGATCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaa < 2:369627‑M1/149‑39 (MQ=255) ccTGTTCCAGGCGGTTGGGCGGGCTGTCCTCGGCGAGCATTTGCGGGGTCAGTTCGAGCAGGATCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCAGCTGGGCCCGCGCCGCGCCAGGCTCCCCAGTACCCAg > 2:381068/1‑149 (MQ=255) tGTTCCAGGCGGTTGGGCGGGCTGTCCTCGTCGAGCATTTGCGGGGTCAGTTCGAGCAGGATCACCAGCGGGTAGGCCGGGCGCTGACGGCTTTCTTCAAGCCGCTGCCAGCTGGGCCCGAGCAGCGCCAGGATCACCATTAACCAgg > 7:23985/1‑148 (MQ=255) ttCCAGGCGGTTGGGCGGGCTGTCCTCGGCGAGCATTTGCGGGGTCAGTTCGAGCAGGATCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCAGCTGGGCCCGAGCAGCGCCAGGATCACCAGTAACCAGGc > 5:78467/1‑147 (MQ=255) ccAGGCGGTTGGGCGGGCTGTCCTCGGCGAGCATTTGCGGGGTCAGTTCGAGCAGGATCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaatcatc < 2:352028‑M1/148‑44 (MQ=255) aGGCGGTTGGGCGGGCTGTCCTCGGCGAGCATTTGCGGGGTCAGTTCGAGCAGGATCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCAGCTGGGCCCGAGCAGCGCCAGGATCACCAGTAACCAGGCAAGGcc > 2:342418/1‑149 (MQ=255) ggCGGTTGGGCGGGCTGTCCTCGGCGAGCATTTGCGGGGTCAGTTCGAGCAGGATCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaatcatctgc > 8:71541‑M1/1‑102 (MQ=255) gCGGTTGGGCGGGCTGTCCTCGGCGAGCATTTGCGGGGTCAGTTCGAGCAGGATCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCAGCTGGGCCCGAGCAGCGCCAGGATCAc > 4:31982/1‑129 (MQ=255) gCGGTTGGGCGGGCTGTCCTCGGCGAGCATTTGCGGGGGCAGTTCGAGCAGGATCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCAGCTGGGCCCGAGCAGCGCCAGGATCAc < 3:31982/129‑1 (MQ=255) gcgggcTGTCCTCGGCGAGCATTTGCGGGGTCAGTTCGAGCAGGATCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaatcatctgccagcgcccgg > 7:359719‑M1/1‑93 (MQ=255) tCCTCGGCGAGCATTTGCGGGGTCAGTTCGAGCAGGATCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaatcatctgccagcgcccggcgcgcttg > 1:260036‑M1/1‑85 (MQ=255) cTCGGCGAGCATTTGCGGGGTCAGTTCGAGCAGGATCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaatcatctgccagcgcccggcgcgcttgcg > 5:264940‑M1/1‑83 (MQ=255) cTCGGCGAGCATTTGCGGGGTCAGTTCGAGCAGGATCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaatcatctgccagcgcccggcgcgcttgc < 8:359719‑M1/148‑66 (MQ=255) ggCGAGCATTTGCGGGGTCAGTTCGAGCAGGATCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaatcatctgccagcgcccggcgcgcttgcgc < 7:71541‑M1/147‑68 (MQ=255) gAGCATTTGCGGGGTCAGTTCGAGCAGGATCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaatcatctgccagcgcccggcgcgcttgcgccggtg > 1:16677‑M1/1‑77 (MQ=255) aTTTGCGGGGTCAGTTCGAGCAGGATCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaatcatctgccagcgcccggcgcgcttgcgccggtgcca > 4:206051‑M1/1‑73 (MQ=255) gCGGGGTCAGTTCGAGCAGGATCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaatcatctgccagcgcccggcgcgcttgcgccggtgccacagt < 3:206051‑M1/148‑80 (MQ=255) gggTCAGTTCGAGCAGGATCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaatcatctgccagcgcccggcgcgcttgcgccggtgccacagtttgt < 2:260036‑M1/149‑84 (MQ=255) gggTCAGTTCGAGCAGGATCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaatcatctgccagcgcccggcgcgcttgcgccggtgccacagtttg > 1:353873‑M1/1‑66 (MQ=255) gTCAGTTCGAGCAGGATCACCAGCGGGTCGGCCGGGCGCTGACGGCGTTCTTCCAGCCGCTGCCAGCTGGGCCCGAGCAGCGCCAGGATCACCAGTAACCAGGCAAGGCCCAGCGCCACCCACGGCAGTTTGCTGGTgctgccgctgcc < 5:353716/149‑1 (MQ=255) aGTTCGAGCAGGATCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaatcatctgccagcgcccggcgcgcttgcgccggtgccacagtttgtacag > 6:33508‑M1/1‑61 (MQ=255) cAGGATCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaatcatctgccagcgcccggcgcgcttgcgccggtgccacagtttgtacagcagccagcc < 2:16677‑M1/149‑97 (MQ=255) aTCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCAGCTGGGCCCGAGCAGCGCCAGGATCACCAGTAACCAGGCAAGGCCCAGCGCCACCCACGGCAGTTTGCTGGTGCTGCCGCTGCCGCCACCCAGCAGTa > 3:231961/1‑148 (MQ=255) tCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCAGCTGGGCCCGAGCAGCGCCAGGATCACCAGTAACCAGGCAAGGCCCAGCGCCACCCACGGCAGTTTGCTGGTGCTGCCGCTGCCGCCACCCAGCAGTaca < 1:381068/149‑1 (MQ=255) ccATCGTGTCGGCCGGGCTCTGACGGCTTTCTTCCAGCCGCTGACAGCTGGGCCCTAGCAGCGCCAGGATCACCAGTAACCAGGCAAGGCCCATCGCCACCCACGGCAGTTTGCTGGTGCTGCCGCTGCCGCCACCCAGCAGTACACCg < 8:23985/149‑1 (MQ=255) ccAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaatcatctgccagcgcccggcgcgcttgcgccggtgccacagtttgtacagcagccagccgagcacgg < 6:264940‑M1/149‑105 (MQ=255) cAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaatcatctgccagcgcccggcgcgcttgcgccggtgccacagtttgtacagcagccagccgagcacgg > 6:203533‑M1/1‑44 (MQ=255) cAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCAGCTGGGCCCGAGCAGCGCCAGGATCACCAGTAACCAGGCAAGGCCCAGCGCCACCCACGGCAGTTTGCTGGTGCTGCCGCTGCCGCCACCCAGCAGTACACCGt < 6:78467/149‑1 (MQ=255) gggTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaatcatctgccagcgcccggcgcgcttgcgccggtgccacagtttgtacagcagccagccgagcacgggaacc < 5:33508‑M1/149‑110 (MQ=255) gggTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCAGCTGGGCCCGAGCAGCGCCAGGCTCACCAGTAACCAGGGAAGGCCCAGCGCCACCCACGGCAGTTTGCTGGTGCTGCCGCTGCCGCCACCCAGCAGTCCACCGTgg > 5:349313/1‑147 (MQ=255) gTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaatcatctgccagcgcccggcgcgcttgcgccggtgccacagtttgtacagcagccagtcgagcacgggaaccgc > 6:213887‑M1/1‑38 (MQ=255) gTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaatcatctgccagcgcccggcgcgcttgcgccggtgccacagtttgtacagcagccagccgagcacgggaaccgc < 3:303088‑M1/149‑112 (MQ=255) gCCGGGCGCTGACTGCTTTCTTCCAGCCGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaatcatctgccagcgcccggcgcgcttgcgccggtgccacagtttgtacagcagcc < 5:295245‑M1/126‑93 (MQ=255) gCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaatcatctgccagcgcccggcgcgcttgcgccggtgccacagtttgtacagcagccagccgagcacgggaaccgccag > 3:362509‑M1/1‑34 (MQ=255) gCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaatcatctgccagcgcccggcgcgcttgcgccggtgccacagtttgtacagcagcc > 6:295245‑M1/1‑34 (MQ=255) gggCGCTGACGGCTTTCTTCCAGCCGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaatcatctgccagcgcccggcgcgcttgcgccggtgccacagtttgtacagcagccagccgagcacgggaaccgccagcagc > 7:174429‑M1/1‑31 (MQ=255) cgcTGACGGCTTTCTTCCAGCCGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaatcatctgccagcgcccggcgcgcttgcgccggtgccacagtttgtacagcagccagccgagcacgggaaccgccagcagccag < 3:335134‑M1/149‑122 (MQ=255) tttCTTCCAGCCGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaatcatctgccagcgcccggcgcgcttgcgccggtgccacagtttgtacagcagccagccgagcacgggaaccgccagcagccagagcgggcg > 6:102125‑M1/1‑18 (MQ=255) tttCTTCCAGCCGCTGCCAGCTGGGCCCGAGCAGCGCCAGGATCACCAGTAACCAGGCAAGGCCCAGCGCCACCCACGGCAGTTTGCTGGTGCTGCCGCTGCCGCCACCCAGCAGTACACCGTGGAAGGCTGGCGGCAGAATCATCTGc > 3:314437/1‑149 (MQ=255) tcttcCAGCCGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaatcatctgccagcgcccggcgcgcttgcgccggtgccacagtttgtacagcagccagccgagcacgggaaccgccagcagccagagcgggcgca < 5:284406‑M1/147‑132 (MQ=255) ttcCAGCCGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaatcatctgccagcgcccggcgcgcttgcgccggtgccacagtttgtacagcagccagccgagcacgggaaccgccagcagccagagcgggcgcagcca > 2:346743‑M1/1‑14 (MQ=255) ttcCAGCCGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaatcatctgccagcgcccggcgcgcttgcgccggtgccacagtttgtacagcagccagccgagcacgggaaccgccagcagccagagcgggcgcagcca > 7:189466‑M1/1‑14 (MQ=255) tcCAGCCGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaatcatctgccagcgcccggcgcgcttgcgccggtgccacagtttgtacagcagccagccgagcacgggaaccgccagcagccagagcgggcgcagccat > 7:267333‑M1/1‑13 (MQ=255) ccAGCCGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaatcatctgccagcgcccggcgcgcttgcgccggtgccacagtttgtacagcagccagccgagcacgggaaccgccagcagccagagcgggcgcagccat < 4:362509‑M1/148‑137 (MQ=255) cAGCCGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaatcatctgccagcgcccggcgcgcttgcgccggtgccacagtttgtacagcagccagccgagcacgggaaccgccagcagccagagcgggcgcagccatt < 8:174429‑M1/148‑138 (MQ=255) gCCGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaatcatctgccagcgcccggcgcgcttgcgccggtgccacagtttgtacagcagccagccgagcacgggaaccgccagcagccagagcgggcgcagccattggg < 5:203533‑M1/149‑141 (MQ=255) gCCGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaatcatctgccagcgcccggcgcgcttgcgccggtgccacagtttgtacagcagccagccgagcacgggaaccgccagcagccagagcgg < 5:15089‑M1/135‑127 (MQ=255) gCCGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaatcatctgccagcgcccggcgcgcttgcgccggtgccacagtttgtacagcagccagccgagcacgggaaccgccagcagccagagcgg > 6:15089‑M1/1‑9 (MQ=255) ccGCTGCCgccacccagcagtacaccgtggaaggctggcggcagaatcatctgccagcgcccggcgcgcttgcgccggtgccacagtttgtacagcagccagccgagcacgggaaccgccagcagccagagcgggcgcagccattgggg < 2:353873‑M1/149‑142 (MQ=255) ccgccacccagcagtacaccgtggaaggctggcggcagaatcatctgccagcgcccggcgcgcttgcgccggtgccacagtttgtacagcagccagtcgagcacgggaaccgccagcagccagagcgggcgcagccattggggccac > 1:189041‑M1/1‑2 (MQ=255) cAGCTGGTCCCGAGCAGCTCCAGGATCACCAGTAACCAGGCTTGGCCCAGCGCGACCCCCGGCAGTGTGCTGGTGCTGCCGCTGCCGGCACCCAGCAGTACACCGTGGAAGGCTGGCGGCAGAATCATCTGCCAGCGCCTGgcggtctt < 6:349313/149‑6 (MQ=255) cAGCTGGGCCCGAGCAGCGCCAGGATCACCAGTAACCAGGCAAGGCCCAGCGCCACCCACGGCAGTTAGCTGGTGCTGCCGCTGCCGCCACCCAGCAGTACACCGTGGAAGGCTGGCGGCAGAATCATCTGCCa < 6:142717/134‑1 (MQ=255) cAGCTGGGCCCGAGCAGCGCCAGGATCACCAGTAACCAGGCAAGGCCCAGCGCCACCCACGGCAGTTAGCTGGTGCTGCCGCTGCCGCCACCCAGCAGTACACCGTGGAAGGCTGGCGGCAGAATCATCTGCCa > 5:142717/1‑134 (MQ=255) | CGGTGTTCAAGCAGGTCGAGGATCTTGCGCCGGGCCTGTTCCAGGCGGTTGGGCGGGCTGTCCTCGGCGAGCATTTGCGGGGTCAGTTCGAGCAGGATCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCAGCTGGGCCCGAGCAGCGCCAGGATCACCAGTAACCAGGCAAGGCCCAGCGCCACCCACGGCAGTTTGCTGGTGCTGCCGCTGCCGCCACCCAGCAGTACACCGTGGAAGGCTGGCGGCAGAATCATCTGCCAGCGCCCGGCGCGCTT > NC_002947/2306171‑2306463 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |