New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5207123 =	67 (1.050)	6 (0.100)	6/256	NT	8.2%	coding (55/594 nt)	PP_4588	nitroreductase family oxidoreductase
	?	NC_002947	5207163 =	70 (1.150)					coding (95/594 nt)	PP_4588	nitroreductase family oxidoreductase

TCTAGAGCCTGGCCTTCGGCAAAGCCAGACCGCTTGTCAGTCGCGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCTTCGGCCTATAACTCGCAGCCTTGGCGCTTCCTTTATGCCCGCCGCGACACGCCGAACTGGGA  >  NC_002947/5206976‑5207268                                                                                                                                                     |                                                                                                                                                   gcccagttgcgattgaagggcaccagcaggctcaggtaacgctcccagttcggcgtgtcgcggcgggcataaaggaagcgccaaggctgcgagttataggccgaaggtgcccagcgggcggcttcgaggaagctcagcagggtttcttc                                                                                                                                                    >  5:229494‑M1/149‑149 (MQ=255) gcccagttgcgattgaagggcaccagcaggctcaggtaaagctcccagttcggcgtggcgcggcgggcataaaggaagcgccaaggctgcgagttattggccgaaggtgcccagcgggcggcttcgaggaagctcagcagcgtttcttc                                                                                                                                                    <  1:164532‑M1/1‑1 (MQ=255)  cTAGAGCCTGGCCTTCGGCAAAGCCAGACCGCTTGTCAGTCGCGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGc                                                                                                                                                  >  1:14654/1‑149 (MQ=255)   tAGAGCCTGGCCTTCGGCAAAGCCAGACCGCTTGTCAGTCGCGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCt                                                                                                                                                 >  1:238134/1‑149 (MQ=255)   tAGAGCCTGGCCTTCGGCAAAGCCAGACCGCTTGTCAGTCGCGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAACAGTTCATCAACCGCt                                                                                                                                                 >  1:152881/1‑149 (MQ=255)   ccagttgcgattgaagggcaccagcaggctcaggtaacgctcccagttcggcgtgtcgcggcgggcataaaggaagcgccaaggctgcgagttataggccgaaggtgcccagcgggcggcttcgaggaagctcagcagggtttcttCGc                                                                                                                                                  >  7:317441‑M1/147‑149 (MQ=255)     gagCCTGGCCTTCGGCAAAGCCAGACCGCTTGTCAGTCGCGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGc                                                                                                                                                  <  3:371899/146‑1 (MQ=255)      agCCTGGCCTTCGGCAAAGCCAGACCGCTTGTCAGTCGCGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGt                                                                                                                                              <  3:373177/149‑1 (MQ=255)        ccTGGCCTTCGGCAAAGCCAGACCGCTTGTCAGTCGCGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCg                                                                                                                                            >  6:203237/1‑149 (MQ=255)        ccTGGCCTTCGGCAAAGCCAGACCGCTTGTCAGTCGCGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCg                                                                                                                                            >  3:53393/1‑149 (MQ=255)           ggCCTTCGGCAAAGCCAGACCGCTTGTCAGTCGCGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCa                                                                                                                                         >  6:24822/1‑149 (MQ=255)           ggCCTTCGGCAAAGCCAGACCGCTTGTCAGTCGCGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCa                                                                                                                                         <  2:213264/149‑1 (MQ=255)           gattgaagggcaccagcaggctgaggtaacgctcccagttcggcgtgtcgcggcgggcataaaggaagcgccaaggctgcgagttataggccgaaggtgcccagcgggcggcttcgaggaagctcagcagggtttcttCGCTGGTCGcc                                                                                                                                          <  7:248876‑M1/11‑1 (MQ=255)             ccTTCGGCAAAGCCAGACCGCTTGTCAGTCGCGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTTCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCAcg                                                                                                                                       >  2:276870/1‑149 (MQ=255)              cTTCGGCAAAGCCAGACCGCTTGTCAGTCGCGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCAcgc                                                                                                                                      >  6:318379/1‑149 (MQ=255)                 cGGCAAAGCCAGACCGCTTGTCAGTCGCGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCGACATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCAcgc                                                                                                                                      <  1:294531/147‑1 (MQ=255)                   gCAAAGCCAGACCGCTTGTCAGTCGCGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCt                                                                                                                                                 >  3:96854/1‑133 (MQ=255)                   gCAAAGCCAGACCGCTTGTCAGTCGCGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCt                                                                                                                                                 <  4:96854/133‑1 (MQ=255)                   gCAAAGCCAGACCGCTTGTCAGTCGCGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCtt                                                                                                                                 >  3:79971/1‑149 (MQ=255)                   gCAAAGCCAGACCGCTTGTCAGTCGCGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCtt                                                                                                                                 >  6:333699/1‑149 (MQ=255)                         ccAGACCGCTTGTCAGTCGCGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCAccgc                                                                                                                           <  2:14996/149‑1 (MQ=255)                           aGACCGCTTGTCAGTCGCGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCAccgcc                                                                                                                          >  4:158358/1‑148 (MQ=255)                            gACCGCTTGTCAGTCGCGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCgccga                                                                                                                        <  1:164671/149‑1 (MQ=255)                            gACCGCTTGTCAGTCGCGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCgccga                                                                                                                        <  5:217901/149‑1 (MQ=255)                               cGCTTGTCGGTCGCGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCgccgagcc                                                                                                                     >  3:71899/1‑149 (MQ=255)                                gCTTGTCAGTCGCGACGGCACGCAGTAGCGTGCGCTTTTTCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCgccgagcc                                                                                                                     >  6:78632/1‑148 (MQ=255)                                 cTTGTCAGTCGCGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCgccgagccga                                                                                                                   <  5:318225/149‑1 (MQ=255)                                     tCAGTCGCGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAg                                                                                                               <  3:351374/149‑1 (MQ=255)                                     tCAGTCGCGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAg                                                                                                               >  1:182202/1‑149 (MQ=255)                                     tCAGTCGCGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAACAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCa                                                                                                                <  2:152881/148‑1 (MQ=255)                                       aGTCGCGACGGCAAGCAGTAGCGTGCTCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGc                                                                                                              <  5:318379/148‑1 (MQ=255)                                        cgctcccagttcggcgtgtcgcggcgggcataaaggaagtgccaaggctgcgagttataggccgaaggtgcccagcgggcggcttcgaggaagctcagcagggtttcttCGCTGGTCGCGACGCGCCTTCACCGCCGAGCCGATCAGCg                                                                                                             >  2:164532‑M1/110‑149 (MQ=255)                                         tCGCGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCgaa                                                                                                           <  7:371708/149‑1 (MQ=255)                                          ctcccagttcggcgtgtcgcggcgggcataaaggaagcgccaaggctgcgagttataggccgaaggtgcccagcgggcggcttcgaggaagctcagcagggtttcttCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCgaa                                                                                                           >  8:248876‑M1/108‑149 (MQ=255)                                           gcgACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAGCCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCCCCGCCGAGCCGATCAGCgacg                                                                                                          >  8:80888/1‑146 (MQ=255)                                             gACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGaaa                                                                                                       <  5:333699/149‑1 (MQ=255)                                             ccagttcggcgtgtcgcggcgggcataaaggaagcgccaaggctgcgagttataggccgaaggtgcccagcgggcggcttcgaggaagctcagcagggtttcttCGCTGGTCGCCACGCGCCTTCACCgccgagcc                                                                                                                     <  6:273900‑M1/32‑1 (MQ=255)                                             ccagttcggcgtgtcgcggcgggcataaaggaagcgccaaggctgcgagttataggccgaaggtgcccagcgggcggcttcgaggaagctcagcagggtttcttCGCTGGTCGCCACGCGCCTTCACCgccgagcc                                                                                                                     >  5:273900‑M1/105‑136 (MQ=255)                                             ccagttcggcgtgtcgcggcgggcataaaggaagcgccaaggctgcgagttataggccgaaggtgcccagcgggcggcttcgaggaagctcagcagggtttcttCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCgaagaa                                                                                                        >  7:286646‑M1/105‑149 (MQ=255)                                                   aCGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCctgc                                                                                                 >  2:177911/1‑149 (MQ=255)                                                    cGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCctgct                                                                                                <  8:230815/149‑1 (MQ=255)                                                    cGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCctgct                                                                                                <  2:238134/149‑1 (MQ=255)                                                      ctactgCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGa                                                                                              <  1:167013/144‑1 (MQ=255)                                                       aGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAg                                                                                             <  2:182202/149‑1 (MQ=255)                                                         tAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCt                                                                                           <  5:263746/149‑1 (MQ=255)                                                             gTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCt                                                                                       <  4:53393/149‑1 (MQ=255)                                                                cgcTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGa                                                                                    <  6:22125/149‑1 (MQ=255)                                                                cgcTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGACCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCg                                                                                     >  5:320770/1‑148 (MQ=255)                                                                       cccGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAg‑ccgcc                                                                            >  1:313885/1‑149 (MQ=255)                                                                        ccgtccgtTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑ccgccc                                                                           >  3:50333/1‑149 (MQ=255)                                                                             cgtTCGCAGGAGCCGCCATGATCGCCAACCCGCG‑CATTGCGGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACTCGCCTTGACCGCCGAGCGGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTgg                                                                      <  1:196624/149‑1 (MQ=255)                                                                              gtTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTggg                                                                     >  3:199756/1‑149 (MQ=255)                                                                                tCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCa                                                                   >  6:24780/1‑149 (MQ=255)                                                                                  gCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCAcc                                                                 >  3:343753/1‑149 (MQ=255)                                                                                    aGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCtt                                                               >  2:251087/1‑149 (MQ=255)                                                                                    aGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCtt                                                               >  5:264763/1‑149 (MQ=255)                                                                                     ggAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCTTc                                                              <  6:325860/149‑1 (MQ=255)                                                                                      gAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCTTCg                                                             <  4:71899/149‑1 (MQ=255)                                                                                         ccgccATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCTTCGGcc                                                          >  2:198902/1‑149 (MQ=255)                                                                                           gccATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGc                                                                                                                                                  >  7:276933/1‑60 (MQ=255)                                                                                           gccATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGc                                                                                                                                                  <  8:276933/60‑1 (MQ=255)                                                                                            ccATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCGGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACGTTCGGCCta                                                        >  8:341210/1‑148 (MQ=255)                                                                                                  gcgcCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCTTCGGCCTATAACTCg                                                 >  2:70279/1‑149 (MQ=255)                                                                                                    gcCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCTTCGGCCTATAACTCGCa                                               <  3:158358/149‑1 (MQ=255)                                                                                                     ccAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAGCCCGCCCGCTGGGCACCTTCGGCCTATAACTCGCa                                               <  1:251087/149‑1 (MQ=255)                                                                                                     ccAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCTTCGGCCTATAACTCGCAg                                              <  5:78632/149‑1 (MQ=255)                                                                                                      cAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCTTCGGCCTATAACTCGCAGc                                             >  8:339765/1‑149 (MQ=255)                                                                                                        aCCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCTTCGGCCTATAACTCGCAGCCt                                           >  2:237107/1‑149 (MQ=255)                                                                                                         cccccG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCGACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCTTCGGCCTATAACTCGCAGCCtt                                          <  1:276870/149‑1 (MQ=255)                                                                                                          ccccG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCTTCGGCCTATAACTCGCAGCCTTg                                         >  3:105331/1‑149 (MQ=255)                                                                                                          ccccG‑CAGTGCCGATTACGCCATCAACGAGCAGTTCATCCACCTCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCTTCGGCCTATAACTCGCAGCCTTg                                         <  8:333181/149‑1 (MQ=255)                                                                                                                cATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCTTCGGCCTATAACTCGCAGCCTTGGCGCt                                    <  4:81066/149‑1 (MQ=255)                                                                                                                  ttGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCTTCGGCCTATAACTCGCAGCCTTGGCGCTTc                                  <  5:203237/149‑1 (MQ=255)                                                                                                                        aTTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCTTCGGCCTATAACTCGCAGCCTTGGCGCTTCCTTTAt                            <  3:189860/149‑1 (MQ=255)                                                                                                                         ttACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCTTCGGCCTATAACTCGCAGCCTTGGCGCTTCCTTTAt                            <  6:264763/148‑1 (MQ=255)                                                                                                                            cGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCTTCGGCCTATAACTCGCAGCCTTGGCGCTTCCTTTATGccc                        <  2:313885/149‑1 (MQ=255)                                                                                                                               cATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCTTCGGCCTATAACTCGCAGCCTTGGCGCTTCCTTTATGCccgcc                     >  3:344316/1‑149 (MQ=255)                                                                                                                                      gAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCTTCGGCCTATAACTCGCAGCCTTGGCGCTTCCTTTATGCCCGCCGCGacac              >  1:143499/1‑149 (MQ=255)                                                                                                                                      gAGCAGTTCATCAACCGCTAGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCTTCGGCCTATAACTCGCAGCCTTGGCGCTTCCTTTATGCCCGCCGCGacac              >  2:95193/1‑149 (MQ=255)                                                                                                                                           gTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCTTCGGCCTATAACTCGCAGCCTTGGCGCTTCCTTTATGCCCGCCGCGACACGCCg          >  2:82690/1‑148 (MQ=255)                                                                                                                                           gTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCAGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCTTCGGCCTATAACTCGCAGCCTTGGCGCTTCCTTTATGCCCGCCGCGACACGCCg          >  8:200971/1‑148 (MQ=255)                                                                                                                                            ttCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCTTCGGCCTATAACTCGCAGCCTTGGCGCTTCCTTTATGCCCGCCGCGACACGCCGaa        >  4:43367/1‑149 (MQ=255)                                                                                                                                               atcaACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCTTCGGCCTATAACTCGCAGCCTTGGCGCTTCCTTTATGCCCGCCGCGACACGCCGAACTg     >  6:358390/1‑149 (MQ=255)                                                                                                                                               atcaACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCTTCGGCCTATAACTCGCAGCCTTGGCGCGTCCTTTATGCCCGCCGCGACACGCCGAACTg     >  4:345539/1‑149 (MQ=255)                                                                                                                                                tcaACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCTTCGGCCt                                                         <  2:312757/96‑1 (MQ=255)                                                                                                                                                tcaACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCTTCGGCCt                                                         >  1:312757/1‑96 (MQ=255)                                                                                                                                                tcaACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCTTCGGCCTATAACTCGCAGCCTTGGCGCTTCCTTTATGCCCGCCGCGACACGCCGAACTgg    <  2:14654/149‑1 (MQ=255)                                                                                                                                                tcaACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCTTCGGCCTATAACTCGCAGCCTTGGCGCTTCCTTTATGCCCGCCGCGACACGCCGAACTgg    >  3:68791/1‑149 (MQ=255)                                                                                                                                                  aaCCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAACCCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCTTCGGCCTATAACTCGCAGCCTTGGCGCTTCCTTTATGCCCGCCGCGACACGCCGAACTGGGa  <  4:79971/149‑1 (MQ=255)                                                                                                                                                  aaCCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCTTCGGCCTATAACTCGCAGCCTTGGCGCTTCCTTTATGCCCGCCGCGACACGCCGAACTgg    >  6:100206/1‑147 (MQ=255)                                                                                                                                                  aaCCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCTTCGGCCTATAACTCGCAGCCTTGGCGCTTCCTTTATGCCCGCCGCGACACGCCGAACTGGGa  <  7:339765/149‑1 (MQ=255)                                                                                                                                                  aaCCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCTTCGGCCTATAACTCGCAGCCTTGGCGCTTCCTTTATGCCCGCCGCGACACGCCGAACTGGGa  <  1:16933/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                   TCTAGAGCCTGGCCTTCGGCAAAGCCAGACCGCTTGTCAGTCGCGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCG‑CATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGGTCGCCACGCGCCTTCACCGCCGAGCCGATCAGCGAAGAAACCCTGCTGAGCTTCCTCGAAG‑CCGCCCGCTGGGCACCTTCGGCCTATAACTCGCAGCCTTGGCGCTTCCTTTATGCCCGCCGCGACACGCCGAACTGGGA  >  NC_002947/5206976‑5207268

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.