BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5533581	70 (1.100)	4 (0.070)	4/246	NT	6.1%	coding (894/1137 nt)	PP_4867	BraC‑like branched‑chain amino acid ABC transporter substrate‑binding protein
*	?	NC_002947	= 5533633	58 (0.990)	4 (0.070)	4/246	NT	6.1%	coding (842/1137 nt)	PP_4867	BraC‑like branched‑chain amino acid ABC transporter substrate‑binding protein

Only 100 of 104 total aligned reads displayed.

CTCACCCATGACGGTCTGCACCGGGTTGGCCTTGAGCCACTTGGCAGCGTCCTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGACGATGCCATCATCGGACATGAAC  >  NC_002947/5533437‑5533728

ctcACCCATGACGGTCTGCACCGGGTTGGCCTTGAGCCACTTGGCAGCGTCCTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCgg                                                                                                                                                     <  2:23568/146‑1 (MQ=255)

ctcACCCATGACGGTCTGCACCGGGTTGGCCTTGAGCCACTTGGCAGCGTCCTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTAAAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCt                                                                                                                                                  >  6:303171/1‑149 (MQ=255)

 tcACCCATGACGGTCTGCACCGGGTTGGCCTTGAGCCACTTGGCAGCGTCCTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCtt                                                                                                                                                 >  3:81180/1‑149 (MQ=255)

   aCCCATGACGGTCTGCACCGGGTTGGCCTTGAGCCACTTGGCAGCGTCCTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGc                                                                                                                                               >  8:290680/1‑149 (MQ=255)

   aCCCATGACGGTCTGCACCGGGTTGGCCTTGAGCCACTTGGCAGCGTCCTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGc                                                                                                                                               <  1:220777/149‑1 (MQ=255)

   aCCCATGACGGTCTGCACCGGGTTGGCCTTGAGCCACTTGGCAGCGTCCTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGc                                                                                                                                               <  7:44621/149‑1 (MQ=255)

     ccATGACGGTCTGCACCGGGTTGGCCTTGAGCCACTTGGCAGCGTCCTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCgg                                                                                                                                             <  2:35734/149‑1 (MQ=255)

     ccATGACGGTCTGCACCGGGTTGGCCTTGAGCCACTTGGCAGCGTCCTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCg                                                                                                                                              >  6:347078/1‑148 (MQ=255)

        tGACGGTCTGCACCGGGTTGGCCTTGAGCCACTTGGCAGCGTCCTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAAc                                                                                                                                          >  3:136691/1‑149 (MQ=255)

        tGACGGTCTGCACCGGGTTGGCCTTGAGCCACTTGGCAGCGTCCTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAAc                                                                                                                                          <  7:259957/149‑1 (MQ=255)

             gTCTGCACCGGGTTGGCCTTGAGCCACTTGGCAGCGTCCTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAActcctc                                                                                                                                     <  8:235626/149‑1 (MQ=255)

                tGCACCGGGTTGGCCTTGAGCCACTTGGCAGCGTCCTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTATCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTccac                                                                                                                                  >  2:228912/1‑149 (MQ=255)

                tGCACCGGGTTGGCCTTGAGCCACTTGGCAGCGTCCTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTccac                                                                                                                                  >  2:368660/1‑149 (MQ=255)

                  cACCGGGTTGGCCTTGAGCCACTTGGCAGCGTCCTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTccacca                                                                                                                                <  6:48112/149‑1 (MQ=255)

                   aCCGGGTTGGCCTTGAGCCACTTGGCAGCGTCCTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCcaccac                                                                                                                               >  6:266768/1‑149 (MQ=255)

                     cGGGTTGGCCTTGAGCCACTTGGCAGCGTCCTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCg                                                                                                                             >  3:186512/1‑149 (MQ=255)

                       ggTTGGCCTTGAGCCACTTGGCAGCGTCCTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGcc                                                                                                                           >  3:325830/1‑149 (MQ=255)

                           ggCCTTGAGCCACTTGGCAGCGTCCTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGTAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTg                                                                                                                        <  5:290257/148‑1 (MQ=255)

                            gCCTTGAGCCACTTGGCAGCGTCCTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCt                                                                                                                      <  4:186512/149‑1 (MQ=255)

                               ttGAGCCACTTGGCAGCGTCCTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTc                                                                                                                   >  6:108857/1‑149 (MQ=255)

                                 gAGCCACTTGGCAGCGTCCTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCt                                                                                                                  <  3:252187/148‑1 (MQ=255)

                                  aGCCACTTGGCAGCGTCCTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTgg                                                                                                                <  4:325830/149‑1 (MQ=255)

                                  aGCCACTTGGCAGCGTCCTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTg                                                                                                                 <  1:368660/148‑1 (MQ=255)

                                    ccACTTGGCAGCGTCCTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGgca                                                                                                              <  3:288208/149‑1 (MQ=255)

                                      aCTTGGCAGCGTCCTCGCCCTTGTTCGACTTCGCGCCATTGGAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGgcagc                                                                                                            <  1:157863/149‑1 (MQ=255)

                                             aGCGTCCTCGCCCTTGTTCGACTTCGCGGCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGcgcg                                                                                                     >  1:221090/1‑149 (MQ=255)

                                              gCGTCCTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCgg                                                                                                    <  5:347078/149‑1 (MQ=255)

                                                  ccTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTcg                                                                                                <  2:381054‑M2/149‑3 (MQ=255)

                                                   cTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGacccgcgcctgctgccagacagcaaggcggtggtggaggagttccgcaaggccgg                                                                                               >  8:20170‑M1/1‑94 (MQ=255)

                                                   cTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTcgg                                                                                               <  2:337898‑M2/149‑4 (MQ=255)

                                                   cTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTcgg                                                                                               >  7:256602‑M2/1‑146 (MQ=255)

                                                   cTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCACAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGCTcgg                                                                                               <  5:176245‑M2/149‑4 (MQ=255)

                                                    tCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTcgg                                                                                               <  6:244064‑M2/148‑4 (MQ=255)

                                                    tCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTcgg                                                                                               <  2:246310‑M2/148‑4 (MQ=255)

                                                      gCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGacccgcgcctgctgccagacagcaaggcggtggtggaggagttccgcaaggccggc                                                                                              <  6:297587‑M1/147‑57 (MQ=255)

                                                      gCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCgg                                                                                                                                             >  2:336929/1‑100 (MQ=255)

                                                      gCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCgg                                                                                                                                             <  1:336929/100‑1 (MQ=255)

                                                       cccTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTg                                                                                                                     <  7:53170/123‑1 (MQ=255)

                                                       cccTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTcggcacc                                                                                           <  7:10022‑M2/149‑8 (MQ=255)

                                                       cccTTGGTCGACTTCGCGCCATTGAAAGCTGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGacccgcgcctgctgccagacagcaatgctgtggtggaggagttccgcaaggacggcacc                                                                                           <  6:152791‑M1/149‑60 (MQ=255)

                                                        ccTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTcggcacc                                                                                           <  5:303587‑M2/148‑8 (MQ=255)

                                                         cTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCgg                                                                                                    <  1:176913/138‑1 (MQ=255)

                                                         cTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCgg                                                                                                    >  2:176913/1‑138 (MQ=255)

                                                         cTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTcggcaccga                                                                                         >  5:108857‑M2/1‑140 (MQ=255)

                                                         cTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTcggcaccg                                                                                          <  2:138200‑M2/148‑9 (MQ=255)

                                                          ttGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTcggcaccgaa                                                                                        >  1:337898‑M2/1‑139 (MQ=255)

                                                            gTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGacccgcgcctgctgccagacagcaaggcggtggtggaggagttccgcaaggccggcaccgaac                                                                                       <  7:20170‑M1/148‑64 (MQ=255)

                                                             ttCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTCGGCACCGAAgg                                                                                      <  4:136691/148‑1 (MQ=255)

                                                               cGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTCGGCACCGAAGGTCa                                                                                   >  1:52574/1‑149 (MQ=255)

                                                                  cTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGGGTAGCCCTCAGGTTCGGTGCCTGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGTCAGCAGGCGCGGGTCGGCACCGAAGGTCATGt                                                                                <  1:228912/149‑1 (MQ=255)

                                                                   ttCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTCGGCACCGAAGGt                                                                                     >  3:132550/1‑143 (MQ=255)

                                                                   ttCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTCGGCACCGAAGGTCATGTa                                                                               >  2:286967/1‑149 (MQ=255)

                                                                   ttCGCGCAATTGAATGCGGCAGCCAGAGCCTGCAGCGAAGGGTTGGCGTACTGGGTGTAGTCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCGTCCACCACCGCCTTGCTGTGTGGCAGCAGGCGCGGTTCGGCACGGAAGGt                                                                                     <  4:132550/143‑1 (MQ=255)

                                                                      gcgcCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTCGGCACCGAAGGTCATGTacac                                                                            <  7:290680/149‑1 (MQ=255)

                                                                        gcCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTCGGCACCGAAGGTCATGTACACGc                                                                          >  7:140553/1‑149 (MQ=255)

                                                                         ccATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTCGGCACCGAAGGTCATGTACACGcc                                                                         <  7:237315/149‑1 (MQ=255)

                                                                           aTTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGt                                                                       >  8:286000/1‑149 (MQ=255)

                                                                           aTTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGt                                                                       >  4:359458/1‑149 (MQ=255)

                                                                           aTTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGt                                                                       >  5:84225/1‑149 (MQ=255)

                                                                            ttGAAAACGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGgcgc                                                                                                      <  3:12758/117‑1 (MQ=255)

                                                                            ttGAAAACGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGgcgc                                                                                                      >  4:12758/1‑117 (MQ=255)

                                                                              gAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCaa                                                                    >  3:306691/1‑149 (MQ=255)

                                                                              gAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCaa                                                                    >  6:158548/1‑149 (MQ=255)

                                                                               aaaGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCaa                                                                    <  2:221090/148‑1 (MQ=255)

                                                                                  gCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑Ta                                                               <  1:138200/149‑1 (MQ=255)

                                                                                  gCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGAGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑Ta                                                               <  1:284080/149‑1 (MQ=255)

                                                                                    ggCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TAtt                                                             <  1:381054/149‑1 (MQ=255)

                                                                                     gCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTg                                                            >  2:24182/1‑149 (MQ=255)

                                                                                      cAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTgc                                                           <  1:246310/149‑1 (MQ=255)

                                                                                           agagCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGcgcc                                                      >  7:72854/1‑149 (MQ=255)

                                                                                           agagCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGcgcc                                                      >  1:387164/1‑149 (MQ=255)

                                                                                                cTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCCCCGCCTTGCTGTCTGGCAGCAGGCGCGGGTCGGCACGGAAGGTCATGTACACGCACTCAACC‑TATAGCACGACGAcgg                                                 >  6:269673/1‑149 (MQ=255)

                                                                                                   cAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCcggcgg                                              <  7:87608/149‑1 (MQ=255)

                                                                                                     gCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTa                                            <  5:244064/149‑1 (MQ=255)

                                                                                                     gCGAAGCGTAGGCGTACAGGGTGTAGCACTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTCGGCACCGAAGGTCATGAACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTa                                            <  7:371139/149‑1 (MQ=255)

                                                                                                             tAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACGATATTGCGCGCCGCCGGCGGTAGACACCa                                     <  1:24182/149‑1 (MQ=255)

                                                                                                                   tACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTtcgtc                              <  8:10022/149‑1 (MQ=255)

                                                                                                                   tACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTtcgtc                              <  4:306691/149‑1 (MQ=255)

                                                                                                                        ggTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGa                         >  4:304288/1‑149 (MQ=255)

                                                                                                                           gtAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTTCGCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGACGa                      >  7:239149/1‑149 (MQ=255)

                                                                                                                                     ggTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGACGATGCCatcatc            <  4:81180/149‑1 (MQ=255)

                                                                                                                                      gTTCGGTTGCGGCCTTTCGGAACTCCTCCACCTCCGCTTTGCTGTGTGGCAGGAGGCGCGGGTCGGGTCGGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGGCGGCGGTAGACACCAGTTCGTCGGTGACGATGCGATCATCg           <  6:176245/149‑1 (MQ=255)

                                                                                                                                      gTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTcggcaccgaacctgagggctacaccctgtacgcctacgcttcgctgcaggctctggctgccgctttcaatggcgcgaagtcgaac             <  7:20170‑M2/148‑86 (MQ=255)

                                                                                                                                       ttCGGTGCCGacccgcgcctgctgccagacagcaaggcggtggtggaggagttccgcaaggccggcaccgaacctgagggctacaccctgtacgcctacgcttcgctgcaggctctggctgccgctttcaatggcgcgaagtcgaacaa           >  1:337898‑M1/1‑10 (MQ=255)

                                                                                                                                       ttCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGACGAt                     <  6:252345/138‑1 (MQ=255)

                                                                                                                                       ttCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGACGAt                     >  5:252345/1‑138 (MQ=255)

                                                                                                                                        tCGGTGCCGacccgcgcctgctgccagacagcaaggcggtggtggaggagttccgcaaggccggcaccgaacctgagggctacaccctgtacgcctacgcttcgctgcaggctctggctgccgctttcaatggcgcgaagtcgaacaag          >  5:108857‑M1/1‑9 (MQ=255)

                                                                                                                                         cGGTGCCGacccgcgcctgctgccagacagcaaggcggtggtggaggagttccgcaaggccggcaccgaacctgagggctacaccctgtacgcctacgcttcgctgcaggctctggctgccgctttcaatggcgcgaagtcgaacaag          <  2:138200‑M1/148‑141 (MQ=255)

                                                                                                                                          ggTGCCGacccgcgcctgctgccagacagcaaggcggtggtggaggagttccgcaaggccggcaccgaacctgagggctacaccctgtacgcctacgcttcgctgcaggctctggctgccgctttcaatggcgcgaagtcgaacaaggg        <  7:10022‑M1/149‑143 (MQ=255)

                                                                                                                                          ggTGCCGacccgcgcctgctgccagacagcaaggcggtggtggaggagttccgcaaggccggcaccgaacctgagggctacaccctgtacgcctacgcttcgctgcaggctctggctgccgctttcaatggcgcgaagtcgaacaagg         <  5:303587‑M1/148‑142 (MQ=255)

                                                                                                                                          ggTGCCGTCCTTGCGGAACTCCTCCACCACAGCATTGCTGTCTGGCAGCAGGCGCGGGTcggcaccgaacctgagggctacaccctgtacgcctacgcttcgctgcaggctctggctgcagctttcaatggcgcgaagtcgaccaaggg        <  6:152791‑M2/149‑91 (MQ=255)

                                                                                                                                             gCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTcggcaccgaacctgagggctacaccctgtacgcctacgcttcgctgcaggctctggctgccgctttcaatggcgcgaagtcgaacaagggc       <  6:297587‑M2/147‑92 (MQ=255)

                                                                                                                                              ccGagccgcgcctgctgccagacagcaaggcggtggtggaggagttccgcaaggccggcaccgaacctgagggctacaccctgtacgcctacgcttcgctgcaggctgtggctgccgctttcaatggcgcgaagtcgaacaagggcgag    <  5:176245‑M1/149‑147 (MQ=255)

                                                                                                                                              ccGacccgcgcctgctgccagacagcaaggcggtggtggaggagttccgcaaggccggcaccgaacctgagggctacaccctgtacgcctacgcttcgctgcaggctctggctgccgctttcaatggcgcgaagtcgaacaagggcgag    >  7:256602‑M1/1‑3 (MQ=255)

                                                                                                                                              ccGacccgcgcctgctgccagacagcaaggcggtggtggaggagttccgcaaggccggcaccgaacctgagggctacaccctgtacgcctacgcttcgctgcaggctctggctgccgctttcaatggcgcgaagtcgaacaagggcgag    <  2:337898‑M1/149‑147 (MQ=255)

                                                                                                                                              ccGacccgcgcctgctgccagacagcaaggcggtggtggaggagttccgcaaggccggcaccgaacctgagggctacaccctgtacgcctacgcttcgctgcaggctctggctgccgctttcaatggcgcgaagtcgaacaagggcga     <  6:244064‑M1/148‑146 (MQ=255)

                                                                                                                                              ccGacccgcgcctgctgccagacagcaaggcggtggtggaggagttccgcaaggccggcaccgaacctgagggctacaccctgtacgcctacgcttcgctgcaggctctggctgccgctttcaatggcgcgaagtcgaacaagggcga     <  2:246310‑M1/148‑146 (MQ=255)

                                                                                                                                              ccGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTcggcaccgaacctgagggctacaccctgtacgcctacgcttcgctgcaggctctggctgccgctttcaatggcgcgaagtcgaacaagggcgag    >  8:20170‑M2/1‑55 (MQ=255)

                                                                                                                                               cGacccgcgcctgctgccagacagcaaggcggtggtggaggagttccgcaaggccggcaccgaacctgagggctacaccctgtacgcctacgcttcgctgcaggctctggctgccgctttcaatggcgcgaagtcgaacaagggcgagg   <  2:381054‑M1/149‑148 (MQ=255)

                                                                                                                                               cGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGACGATGCCATCATCGGACATGAAc  <  8:140553/149‑1 (MQ=255)

CTCACCCATGACGGTCTGCACCGGGTTGGCCTTGAGCCACTTGGCAGCGTCCTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGCAGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGACGATGCCATCATCGGACATGAAC  >  NC_002947/5533437‑5533728

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.