New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5533581	70 (1.100)	4 (0.070)	4/246	NT	6.1%	coding (894/1137 nt)	PP_4867	BraC‑like branched‑chain amino acid ABC transporter substrate‑binding protein
	?	NC_002947	= 5533633	58 (0.990)					coding (842/1137 nt)	PP_4867	BraC‑like branched‑chain amino acid ABC transporter substrate‑binding protein

CCTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGACGATGCCATCATCGGACATGAACTTGACGTCCTTCAGGCCTTGCTCGCGCAGCTGGCGTACCAGCGG  >  NC_002947/5533487‑5533772                                                                                                                                                    |                                                                                                                                             ccTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTcg                                                                                                                                            <  2:381054‑M2/149‑3 (MQ=255)  cTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTcgg                                                                                                                                           <  2:337898‑M2/149‑4 (MQ=255)  cTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTcgg                                                                                                                                           >  7:256602‑M2/1‑146 (MQ=255)  cTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCACAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGCTcgg                                                                                                                                           <  5:176245‑M2/149‑4 (MQ=255)   tCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTcgg                                                                                                                                           <  6:244064‑M2/148‑4 (MQ=255)   tCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTcgg                                                                                                                                           <  2:246310‑M2/148‑4 (MQ=255)      cccTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTcggcacc                                                                                                                                       <  7:10022‑M2/149‑8 (MQ=255)       ccTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTcggcacc                                                                                                                                       <  5:303587‑M2/148‑8 (MQ=255)        cTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTcggcaccga                                                                                                                                     >  5:108857‑M2/1‑140 (MQ=255)        cTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTcggcaccg                                                                                                                                      <  2:138200‑M2/148‑9 (MQ=255)         ttGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTcggcaccgaa                                                                                                                                    >  1:337898‑M2/1‑139 (MQ=255)            ttCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAgg                                                                                                                                  <  4:136691/148‑1 (MQ=255)            ttCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGAGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGt                                                                                                                                 >  2:284080/1‑149 (MQ=255)              cGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCa                                                                                                                               >  1:52574/1‑149 (MQ=255)                 cTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGGGTAGCCCTCAGGTTCGGTGCCTGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGTCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGt                                                                                                                            <  1:228912/149‑1 (MQ=255)                  ttCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGt                                                                                                                                 >  3:132550/1‑143 (MQ=255)                  ttCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTa                                                                                                                           >  2:286967/1‑149 (MQ=255)                  ttCGCGCAATTGAATGCGGCAGCCAGAGCCTGCAGCGAAGGGTTGGCGTACTGGGTGTAGTCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCGTCCACCACCGCCTTGCTGTGTGGCAGC‑AGGCGCGGTTCGGCACGGAAGGt                                                                                                                                 <  4:132550/143‑1 (MQ=255)                     gcgcCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTacac                                                                                                                        <  7:290680/149‑1 (MQ=255)                       gcCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGc                                                                                                                      >  7:140553/1‑149 (MQ=255)                        ccATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGcc                                                                                                                     <  7:237315/149‑1 (MQ=255)                          aTTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGt                                                                                                                   >  4:359458/1‑149 (MQ=255)                          aTTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGt                                                                                                                   >  8:286000/1‑149 (MQ=255)                          aTTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGt                                                                                                                   >  5:84225/1‑149 (MQ=255)                             gAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCaa                                                                                                                >  6:158548/1‑149 (MQ=255)                             gAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCaa                                                                                                                >  3:306691/1‑149 (MQ=255)                              aaaGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCaa                                                                                                                <  2:221090/148‑1 (MQ=255)                                 gCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑Ta                                                                                                           <  1:138200/149‑1 (MQ=255)                                 gCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGAGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑Ta                                                                                                           <  1:284080/149‑1 (MQ=255)                                   ggCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TAtt                                                                                                         <  1:381054/149‑1 (MQ=255)                                    gCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTg                                                                                                        >  2:24182/1‑149 (MQ=255)                                     cAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTgc                                                                                                       <  1:246310/149‑1 (MQ=255)                                          agagCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGcgcc                                                                                                  >  1:387164/1‑149 (MQ=255)                                          agagCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGcgcc                                                                                                  >  7:72854/1‑149 (MQ=255)                                               cTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCCCCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACGGAAGGTCATGTACACGCACTCAACC‑TATAGCACGACGAcgg                                                                                             >  6:269673/1‑149 (MQ=255)                                                  cAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCcggcgg                                                                                          <  7:87608/149‑1 (MQ=255)                                                  cAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCcggcg                                                                                           <  6:303587/148‑1 (MQ=255)                                                    gCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTa                                                                                        <  5:244064/149‑1 (MQ=255)                                                    gCGAAGCGTAGGCGTACAGGGTGTAGCACTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGAACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTa                                                                                        <  7:371139/149‑1 (MQ=255)                                                            tAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACGATATTGCGCGCCGCCGGCGGTAGACACCa                                                                                 <  1:24182/149‑1 (MQ=255)                                                              ggCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGt                                                                               <  4:380792/148‑1 (MQ=255)                                                                  tACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTtcgtc                                                                          <  8:10022/149‑1 (MQ=255)                                                                  tACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTtcgtc                                                                          <  4:306691/149‑1 (MQ=255)                                                                       ggTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGa                                                                     >  4:304288/1‑149 (MQ=255)                                                                          gtAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTTCGCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGACGa                                                                  >  7:239149/1‑149 (MQ=255)                                                                                    ggTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGACGATGCCatcatc                                                        <  4:81180/149‑1 (MQ=255)                                                                                     gTTCGGTTGCGGCCTTTCGGAACTCCTCCACCTCCGCTTTGCTGTGTGGCAGG‑AGGCGCGGGTCGGGTCGGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGGCGGCGGTAGACACCAGTTCGTCGGTGACGATGCGATCATCg                                                       <  6:176245/149‑1 (MQ=255)                                                                                     gTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTcggcaccgaacctgagggctacaccctgtacgcctacgcttcgctgcaggctctggctgccgctttcaatggcgcgaagtcgaac                                                         <  7:20170‑M2/148‑86 (MQ=255)                                                                                      ttCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGACGAt                                                                 >  5:252345/1‑138 (MQ=255)                                                                                      ttCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGACGAt                                                                 <  6:252345/138‑1 (MQ=255)                                                                                         ggTGCCGTCCTTGCGGAACTCCTCCACCACAGCATTGCTGTCTGGCAGC‑AGGCGCGGGTcggcaccgaacctgagggctacaccctgtacgcctacgcttcgctgcaggctctggctgcagctttcaatggcgcgaagtcgaccaaggg                                                    <  6:152791‑M2/149‑91 (MQ=255)                                                                                            gCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTcggcaccgaacctgagggctacaccctgtacgcctacgcttcgctgcaggctctggctgccgctttcaatggcgcgaagtcgaacaagggc                                                   <  6:297587‑M2/147‑92 (MQ=255)                                                                                             ccGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTcggcaccgaacctgagggctacaccctgtacgcctacgcttcgctgcaggctctggctgccgctttcaatggcgcgaagtcgaacaagggcgag                                                >  8:20170‑M2/1‑55 (MQ=255)                                                                                              cGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGACGATGCCATCATCGGACATGAAc                                              <  8:140553/149‑1 (MQ=255)                                                                                                     gCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGACGATGCCATCATCGGACATGAACTTGAc                                         <  1:286967/147‑1 (MQ=255)                                                                                                       ggAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGacac                                                                                   <  5:98271/103‑1 (MQ=255)                                                                                                       ggAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGacac                                                                                   >  6:98271/1‑103 (MQ=255)                                                                                                       ggAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGACGATGCCATCATCGGACATGAACTTGACGTcc                                     >  3:244771/1‑149 (MQ=255)                                                                                                              ctccACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGACGATGc                                                               <  7:345688/116‑1 (MQ=255)                                                                                                              ctccACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGACGATGc                                                               >  8:345688/1‑116 (MQ=255)                                                                                                               tccACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGACGATGCCATCATCGGACATGAACTTGACGTCCTTCAGGcc                             >  4:369069/1‑149 (MQ=255)                                                                                                                ccaccaCCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCTCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGACGATGCCATCATCGGACATGAACTTGACGTCCTTCAGGc                              <  1:262397/147‑1 (MQ=255)                                                                                                                ccaccaCCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGACGATGCCATCATCGGACATGAACTTGACGTCCTTCAGGc                              >  2:262397/1‑147 (MQ=255)                                                                                                                    caccGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGACGATGCCATCATCGGACATGAACTTGACGTCCTTCAGGCCTTGCt                        >  2:298585/1‑149 (MQ=255)                                                                                                                     ccgcgcctgctgcCAGACAGCAAGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGACGATGCCATCATCGGACATGAACTTGACGTCCTTCAGGCCTTGCt                        >  3:290291/8‑149 (MQ=255)                                                                                                                     ccgcgcctgctgcCAGACAGCAAGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑GATTGCGCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGACGCTGCCATCATCGGACATGAACTTGACGTCCTTCAGGCCTTGCt                        >  7:298077/8‑149 (MQ=255)                                                                                                                           ttGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGACGATGCCATCATCGGACATGAACTTGACGTCCTTCAGGCCTTGCTCGCGCAg                 >  3:326727/1‑149 (MQ=255)                                                                                                                             gCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGACGATGCCATCATCGGACATGAACTTGACGTCCTTCAGGCCTTGCTCGCGCAg                 <  5:158548/147‑1 (MQ=255)                                                                                                                               tGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACTCCAGTTCGTCGGTGACAATGCCATCATCGGACATGAACTTGACGTCCTTCAGGCCTTGCTCGCGCAGCTgg             >  1:126777/1‑149 (MQ=255)                                                                                                                                gTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGACGATGCCATCATCGGACATGAACTTGACGTCCTTCAGGCCTTGCtg                       <  6:18698/138‑2 (MQ=255)                                                                                                                                gTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGACGATGCCATCATCGGACATGAACTTGACGTCCTTCAGGCCTTGCtg                       >  5:18698/1‑137 (MQ=255)                                                                                                                                 tCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGACGATGCCATCATCGGACATGAACTTGACGTCCTTCAGGCCTTGCTCGCGCAGCTGGc            <  3:304288/148‑1 (MQ=255)                                                                                                                                     gcagc‑aGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGACGATGCCATCATCGGACATGAACTTGACGTCCTTCAGGCCTTGCTCGCGCAGCTGGCGt          <  5:266768/146‑1 (MQ=255)                                                                                                                                        gc‑agGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGACGATGCCATCATCGGACATGAACTTGACGTCCTTCAGGCCTTGCTCGCTCAGCTGGCGTACCAGc    >  7:290026/1‑149 (MQ=255)                                                                                                                                           agGCGCGGGTCGGCACCGAAGGTCATGTACAGGCCGTCAACG‑TATTGCGCGCGGCCGGCGGTAGACACCAGTTCGTCGGTGTCGATGCCATCATCGGACATGAACTTGACGTCCTTCAGGCCTTGCTCGCGCAGGTGGCGTACCATCgg  <  8:72854/149‑1 (MQ=255)                                                                                                                                           agGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGACGATGCCATCATCGGACATGAACTTGACGTCCTTCAGGCCTTGCTCGCGCAGCTGGCGTACCAGCgg  <  2:387164/149‑1 (MQ=255)                                                                                                                                               gcgGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGACGATGCCATCATCGGACATGAACTTGACGTCCTTCAGGCCTTGCTCGCGCAGCt               >  4:270872/1‑132 (MQ=255)                                                                                                                                               gcgGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGACGATGCCATCATCGGACATGAACTTGACGTCCTTCAGGCCTTGCTCGCGCAGCt               <  3:270872/132‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                             CCTCGCCCTTGTTCGACTTCGCGCCATTGAAAGCGGCAGCCAGAGCCTGCAGCGAAGCGTAGGCGTACAGGGTGTAGCCCTCAGGTTCGGTGCCGGCCTTGCGGAACTCCTCCACCACCGCCTTGCTGTCTGGCAGC‑AGGCGCGGGTCGGCACCGAAGGTCATGTACACGCCGTCAACG‑TATTGCGCGCCGCCGGCGGTAGACACCAGTTCGTCGGTGACGATGCCATCATCGGACATGAACTTGACGTCCTTCAGGCCTTGCTCGCGCAGCTGGCGTACCAGCGG  >  NC_002947/5533487‑5533772

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.