New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 80992	63 (0.990)	4 (0.070)	4/246	NT	6.1%	intergenic (+49/‑85)	tsaC/PP_5425	threonylcarbamoyl‑AMP synthase/hypothetical protein
	?	NC_002947	= 81051	65 (1.110)					intergenic (+108/‑26)	tsaC/PP_5425	threonylcarbamoyl‑AMP synthase/hypothetical protein

TTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCGCAAGCCCAAGGCAGAGCTCTATTCCATCATCCCGAA  >  NC_002947/80903‑81198                                                                                                                                                     |                                                                                                                                                      ttCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCAt                                                                                                                                                       >  4:244713/1‑149 (MQ=255)    gcgACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATgcc                                                                                                                                                    <  4:109686‑M2/149‑4 (MQ=255)    gcgACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATgcc                                                                                                                                                    >  3:304492‑M2/1‑146 (MQ=255)         cTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATgcccgctc                                                                                                                                               <  2:258480‑M2/149‑9 (MQ=255)               aCCGGCGAAGTCGTTCGCCCGGGTTGATACGAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGaaa                                                                                                                                        <  1:349934/149‑1 (MQ=255)               aCCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGaaa                                                                                                                                        <  6:176008/149‑1 (MQ=255)                       aGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCCCg                                                                                                                               >  5:88160/1‑149 (MQ=255)                           gTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGcaca                                                                                                                           >  7:146129/1‑149 (MQ=255)                            ttCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCTTGCCC‑GCTCCCGAAA‑GTGTCACGCACAt                                                                                                                          <  1:24604/149‑1 (MQ=255)                            ttCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACAt                                                                                                                          <  3:23707/149‑1 (MQ=255)                            ttCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACAt                                                                                                                          <  1:173463/149‑1 (MQ=255)                               gCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGAc                                                                                                                       >  5:133847/1‑149 (MQ=255)                               gCCCGGGTTGATACCAAACCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGCGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCCTGCCC‑GCTCCCGAAA‑GTGTCACGCACATGAc                                                                                                                       >  6:387870/1‑149 (MQ=255)                                cccGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACt                                                                                                                      >  4:228313/1‑149 (MQ=255)                                  cGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGc                                                                                                                    <  1:258480/149‑1 (MQ=255)                                        gATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCg                                                                                                              >  2:348624/1‑149 (MQ=255)                                         aTACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCg                                                                                                              <  3:109686/148‑1 (MQ=255)                                          tACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACACGGTGCCAGGCACGGGCATCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GGGTCACGCACATGACTGCCCTTCgca                                                                                                            >  4:360882/1‑149 (MQ=255)                                           aCCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTAGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCgcag                                                                                                           >  5:8882/1‑149 (MQ=255)                                            ccAATGCACTGGCCTGGCTCGGGCCTCGCGCCCCTGGGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTTTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCgcagc                                                                                                          <  5:264834/149‑1 (MQ=38)                                             cAATCCTCAGGACTGGGTGGGGACTCGGGGCCCTGTGGGAGCGGTGGCGCCAGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCGCTTCgcagc                                                                                                          <  8:146129/148‑1 (MQ=25)                                             cAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACAt                                                                                                                          <  7:98764/132‑1 (MQ=255)                                             cAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACAt                                                                                                                          >  8:98764/1‑132 (MQ=255)                                             cAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCgcagca                                                                                                         <  3:24606/149‑1 (MQ=255)                                             cAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCgcagca                                                                                                         >  6:290026/1‑149 (MQ=255)                                              aaTCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCAc                                                                                                        <  3:244713/149‑1 (MQ=255)                                                  cacaGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGtt                                                                                                     <  2:75190/148‑1 (MQ=255)                                                   acaGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTg                                                                                                   >  7:252506/1‑149 (MQ=255)                                                   acaGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTg                                                                                                   >  2:328456/1‑149 (MQ=255)                                                        ccTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTcgc                                                                                              <  1:348624/149‑1 (MQ=255)                                                         cTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTcgcg                                                                                             <  1:270519/149‑1 (MQ=255)                                                            gCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCga                                                                                            <  3:228313/147‑1 (MQ=255)                                                             cTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCgatga                                                                                         >  1:179082/1‑149 (MQ=255)                                                              tCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCgatgat                                                                                        >  7:146697/1‑149 (MQ=255)                                                              tCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTATGGTcgcgccgat                                                                                        >  7:360744/1‑144 (MQ=255)                                                                gggACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATgg                                                                                      <  3:344620/149‑1 (MQ=255)                                                                  gACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTCTCACGCACATAACTGCCCTTCGCAGCACGTTTGGTCGCgatagat                                                                                       >  4:117973/1‑142 (MQ=255)                                                                  gACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGCGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAATGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGc                                                                                     <  1:294047/149‑1 (MQ=255)                                                                    cTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTAt                                                                                  <  8:252506/149‑1 (MQ=255)                                                                             cTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATgcccgctcccacaggggcccgagtcccgagccaggcctgtggattggtatcaacccgggcgaacgacttcgccggt                                                                           <  1:285768‑M2/149‑77 (MQ=255)                                                                             cTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAg                                                                         <  5:290026/149‑1 (MQ=255)                                                                               gtgGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATgcccgctcccacaggggcccgagtcccgagccaggcctgtggattggtatcaacccgggcgaacgacttcgccggttg                                                                         <  2:81131‑M2/149‑79 (MQ=255)                                                                                  ttcgCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGGTTGGTCGCGATGATGGCTATGGTAACGAGGTCtt                                                                    >  7:147741/4‑149 (MQ=255)                                                                                      cGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGAt                                                                <  2:29724/149‑1 (MQ=255)                                                                                        gtcgcgcCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGa                                                              <  3:205228/147‑1 (MQ=255)                                                                                          cgcgcCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAgg                                                            <  2:298655/149‑1 (MQ=255)                                                                                           gcgcCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGc                                                           >  6:276414/1‑149 (MQ=255)                                                                                               ccGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAAc                                                                            <  5:24837/128‑1 (MQ=255)                                                                                               ccGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAAc                                                                            >  6:24837/1‑128 (MQ=255)                                                                                                  cgAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGGCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGAtttt                                                     >  1:107785/1‑149 (MQ=255)                                                                                                   gaagaaTACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCgatga                                                                                         >  8:238154/1‑111 (MQ=255)                                                                                                   gaagaaTACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCgatga                                                                                         <  7:238154/111‑1 (MQ=255)                                                                                                     agaaTACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGaa                                                 <  6:133847/149‑1 (MQ=255)                                                                                                       cccctcactcggtGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATgcccgctcccacaggggcccgagtcccgagccaggcctgtggattggtatcaacccgggcgaacgacttcgccggttgccaggtcgcgaatcacactcggg                                                  >  1:140401‑M2/7‑47 (MQ=255)                                                                                                         tACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGTTGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGa                                             >  4:171127/1‑149 (MQ=255)                                                                                                         tACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGa                                             <  5:276414/149‑1 (MQ=255)                                                                                                              cTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGcc                                        >  5:156956/1‑149 (MQ=255)                                                                                                                 ggTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGccc                                       <  6:8882/147‑1 (MQ=255)                                                                                                                     gcgaacACGGGCGAAGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCGCAAGc                                 >  1:77774/6‑149 (MQ=255)                                                                                                                      cAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCGCAAGcc                                >  5:323144/1‑149 (MQ=255)                                                                                                                      cAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCGCAAGcc                                >  8:173234/1‑149 (MQ=255)                                                                                                                       aGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCGCAAGccc                               <  7:173234/149‑1 (MQ=255)                                                                                                                       aGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCGCAAGcc                                >  8:201648/1‑148 (MQ=255)                                                                                                                       aGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCGCAAGcc                                >  6:221807/1‑148 (MQ=255)                                                                                                                           aCGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGccc                                       >  2:91894/1‑137 (MQ=255)                                                                                                                           aCGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGccc                                       <  1:91894/137‑1 (MQ=255)                                                                                                                            cGGGCTTCGCCCGTGGTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCGCAAGCCCAAGGc                          <  6:88160/149‑1 (MQ=255)                                                                                                                             gggCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAAc                                                                            <  1:328154/98‑1 (MQ=255)                                                                                                                             gggCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAAc                                                                            >  2:328154/1‑98 (MQ=255)                                                                                                                                    gCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCGCAAGCCCAAGGCAGAGctc                   >  4:365374/1‑148 (MQ=255)                                                                                                                                      ccGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGGTGAGGCGATTTTTGAACTGACGGCCCGCAAGCCCAAGGCAGAGCTCTAt                >  5:190228/1‑149 (MQ=255)                                                                                                                                      ccGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGGTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGCACTGAGGGCCCGCCGGCCCAAGGCAGAGCTCTag                >  8:254360/1‑148 (MQ=255)                                                                                                                                        gtgtTCGCGGGCATgcccgctcccacaggggcccgagtcccgagccaggcctgtggattggtatcaacccgggcgaacgacttcgccggttgccaggtcgcgaatcacactcgggttcttccgcccgcccagcgccccgccaagcacca                >  2:285768‑M2/1‑14 (MQ=255)                                                                                                                                                gggCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCGCAAGCCCAAGGCAGAGCTCTATTCCATCATcc      >  1:380003/1‑149 (MQ=255)                                                                                                                                                gggCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCGCAAGCCCAAGGCAGAGCTCTATTCCATCATcc      <  8:147741/149‑1 (MQ=255)                                                                                                                                                    aTGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCGCAAGCCCAAGGCAGAGCTCTATTCCATCATCCCGaa  <  8:146697/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                      TTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC‑GCTCCCGAAA‑GTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATGGTAACGAGGTCTTCGATGAGGCGATTTTTGAACTGACGGCCCGCAAGCCCAAGGCAGAGCTCTATTCCATCATCCCGAA  >  NC_002947/80903‑81198

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.