New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	353068 =	37 (0.580)	11 (0.200)	9/228	NT	29.4%	intergenic (+35/+83)	hisF/cbcV	imidazole glycerol phosphate synthase subunit HisF/choline/betaine/carnitine ABC transporter ATP binding protein
	?	NC_002947	353120 =	21 (0.390)					intergenic (+87/+31)	hisF/cbcV	imidazole glycerol phosphate synthase subunit HisF/choline/betaine/carnitine ABC transporter ATP binding protein

GCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCAGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCTTGTTGCCGGTTTGATAACGAATCTGCAG  >  NC_002947/352972‑353267                                                                                                                                                     |                                                                                                                                                    gCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGccc                                                                                                                                                     <  6:287615/149‑1 (MQ=255)  ggtggtggggatactcggggataccgagctttaccacgcgctgttcggcaagaaccacggttgaagcaattggggccgcttcgcggcccttcgcgggcacgcccgctcccacagagatctcagcaaacctgtgggagcgggcgtgcccg                                                                                                                                                    >  7:123997‑M2/148‑149 (MQ=255)   gtggtggggatactcggggataccgagctttaccacgcgctgctcggcaagaaccacggttgaagcaattggggccgcttcgcggcccttcgcgggcacgcccgctccaacagagatctcagcaaacctgtgggagcgggcgtgcccgc                                                                                                                                                   >  5:294178‑M2/147‑149 (MQ=255)      ggggggatactcggggaccccccgctttaccccgcgctgctcggcaagaaccacggttgacgcaattggggccgcttcgcggcccttcgcgggcacgcccgctcccaccgcgatctcagcaaacctgtgggagcgggcgtgccCGCGaa                                                                                                                                                <  4:278008‑M2/6‑1 (MQ=255)         acaGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAggg                                                                                                                                             >  7:230880/1‑149 (MQ=255)               ccGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCCAAGGGCcgcg                                                                                                                                        >  6:294178/1‑148 (MQ=255)                     gCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGGGGGCGTGCCCGCGAAGGGCCGCGAAGCGGc                                                                                                                                 <  8:230880/149‑1 (MQ=255)                     gCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGc                                                                                                                                 <  2:314351/149‑1 (MQ=255)                                 aTGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCtt                                                                                                                      >  8:123997/1‑148 (MQ=255)                                                    tcgtTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCCCCCCCCCAACCACAGGTTTGGGGAGATAGATGTGGGGGCGGGGGTGGCCGCGCAGGGCCCCGAAGCGGCCCCAAATGGGTGAAACGGGGTTGTTTCCGag                                                                                                  >  6:30084/1‑149 (MQ=255)                                                         cGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGagcagc                                                                                              <  1:255235/148‑1 (MQ=255)                                                             gATCCATTGACCGGGGCTGCTTTGCAGCCCTGCGCGGGCACGCCCGCGCCCACAGGTTTGCGGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTg                                                                                         <  3:306786/149‑1 (MQ=255)                                                              aTCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTgg                                                                                        >  3:118132/1‑149 (MQ=255)                                                                 cATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGGTCTTGCCGAGCAGCGCGTGGTa                                                                                      >  3:265455/1‑148 (MQ=255)                                                                      aCCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTc                                                                                >  5:120276/1‑149 (MQ=255)                                                                       ccGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCg                                                                               <  1:347830/149‑1 (MQ=255)                                                                                 tttGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGGTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATcccc                                                                       >  5:115694/1‑147 (MQ=255)                                                                                   tGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGa                                                                     <  4:118132/147‑1 (MQ=255)                                                                                        cccTTCCCGGGAACCCCCCATCACACAGTTTTGCATACATCTATCGGGGTGGGGGCTGGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCTGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATccc                                                              <  8:263393/149‑1 (MQ=255)                                                                                           ttcgcgGGCACGCCCGCTCCCACAGGTTTGCTGAGATCGCGGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCGTCAACCGTGGTTCTTGCCGAGCAGCGCGGGGTAAAGCGGGGGGTCCCCGAGTatcccccc                                                           <  4:278008‑M1/143‑3 (MQ=255)                                                                                              gcgGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTTGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCcaccac                                                        >  5:294178‑M1/4‑149 (MQ=255)                                                                                               cgGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAACAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCaccacc                                                       >  7:123997‑M1/3‑149 (MQ=255)                                                                                                   cacgcccgctcccacagagatctcagcaaacctgtgggagcgggcgtgccCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCg                                                                               <  3:258344‑M2/71‑1 (MQ=255)                                                                                                   cacgcccgctcccacagagatctcagcaaacctgtgggagcgggcgtgccCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCg                                                                               >  4:258344‑M2/51‑121 (MQ=255)                                                                                                    acgcccgctcccacagagatctcagcaaacctgtgggagcgggcgtgccCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCg                                                                               >  5:392804‑M2/50‑120 (MQ=255)                                                                                                    acgcccgctcccacagagatctcagcaaacctgtgggagcgggcgtgccCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCg                                                                               <  6:392804‑M2/71‑1 (MQ=255)                                                                                                      acccgctcccacagagatctcagcaaacctgtgggagcgggcgtgccCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGt                                                >  4:222143‑M2/48‑149 (MQ=255)                                                                                                      GCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGt                                                <  7:314398‑M1/149‑1 (MQ=255)                                                                                                      GCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGt                                                <  7:326718‑M1/149‑1 (MQ=255)                                                                                                      GCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTAACCCCACCCCCCTGACGt                                                <  3:77974‑M1/149‑1 (MQ=255)                                                                                                        ccgctcccacagagatctcagcaaacctgtgggagcgggcgtgccCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTa                                              >  5:105863‑M2/46‑149 (MQ=255)                                                                                                            tcccacagagatctcagcaaacctgtgggagcgggcgtgccCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCt                                          >  1:370793‑M2/42‑149 (MQ=255)                                                                                                            TCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCt                                          <  7:370029‑M1/149‑1 (MQ=255)                                                                                                              ccacagagatctcagcaaacctgtgggagcgggcgtgccCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGc                                                                                                      >  5:254834‑M2/40‑87 (MQ=255)                                                                                                              ccacagagatctcagcaaacctgtgggagcgggcgtgccCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCt                                          <  3:222143‑M2/108‑1 (MQ=255)                                                                                                              CCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGAGAGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTg                                         <  4:355318‑M1/148‑1 (MQ=255)                                                                                                                    gTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATcccc                                                                       >  2:272145/1‑112 (MQ=255)                                                                                                                    gTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCAc                                   >  5:140379/1‑148 (MQ=255)                                                                                                                     gatctcagcaaacctgtgggagcgggcgtgccCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCa                                 <  2:370793‑M2/117‑1 (MQ=255)                                                                                                                        gCTGAGATCTGTGTGGGAGGGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGc                               <  5:30084/148‑1 (MQ=255)                                                                                                                         cTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCtt                             <  4:265455/149‑1 (MQ=255)                                                                                                                          tGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCg                                                                               <  4:40208/98‑1 (MQ=255)                                                                                                                          tGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCg                                                                               >  3:40208/1‑98 (MQ=255)                                                                                                                                   tgtgggagcgggcgtgccCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCTTGTTGc                        <  8:370029‑M2/126‑1 (MQ=255)                                                                                                                                     tgggagcgggcgtgccCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCTTGTTGCCGGttt                  >  8:95869‑M2/17‑148 (MQ=255)                                                                                                                                     tgggagcgggcgtgccCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCTTGTTGCCGGttt                  <  1:174577‑M2/132‑1 (MQ=255)                                                                                                                                     tgggagcgggcgtgccCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCTTGTTGCCGGttt                  <  4:299383‑M2/132‑1 (MQ=255)                                                                                                                                     tgggagcgggcgggccCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCTTGTTGCCGGttt                  <  6:115694‑M2/132‑1 (MQ=255)                                                                                                                                       ggagcgggcgtgccCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCTTGTTGCCGGTTTGa                >  4:126477‑M2/15‑148 (MQ=255)                                                                                                                                       ggagcgggcgtgccCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCTTGTTGCCGGTTTGa                >  2:349762‑M2/15‑148 (MQ=255)                                                                                                                                         agcgggcgtgccCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCTTGTTGCCGGTTTGATaa             <  6:105863‑M2/137‑1 (MQ=255)                                                                                                                                         agcgggcgtgccAGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCTTGTTGCCGGTTTGATaa             <  4:235190‑M2/137‑1 (MQ=255)                                                                                                                                          gcgggcgtgccCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCTTGTTGCCGGTTTGATAAc            <  6:120276‑M2/138‑1 (MQ=255)                                                                                                                                          gcgggcgtgccCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCTTGTTGCCGGTTTGATAAc            >  4:16435‑M2/12‑149 (MQ=255)                                                                                                                                              gcgtgccCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCTTGTTGCCGGTTTGATAACGAAt        >  3:273735‑M2/8‑149 (MQ=255)                                                                                                                                                gtgccCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGAGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCAGTCGTTATCCTGCAGCACCAGCTTGTTGCCGGTTTGATAACGAATCt      >  8:15182‑M2/6‑149 (MQ=255)                                                                                                                                                    cCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCTTGTTGCCGGTTTGATAACGAATCTGCAg  >  1:178664‑M2/2‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                    GCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCAGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCTTGTTGCCGGTTTGATAACGAATCTGCAG  >  NC_002947/352972‑353267

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.