New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1748689 =	69 (1.090)	4 (0.070)	4/254	NT	6.4%	intergenic (‑22/‑310)	PP_1548/PP_5744	hypothetical protein/hypothetical protein
	?	NC_002947	1748732 =	51 (0.840)					intergenic (‑65/‑267)	PP_1548/PP_5744	hypothetical protein/hypothetical protein

CCTGCATCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCG‑CGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGCC  >  NC_002947/1748586‑1748880                                                                                                                                                     |                                                                                                                                                       ccTGCATCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCG‑CGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGgt                                                                                                                                                      <  1:202335/149‑1 (MQ=255) ccTGCATCAGGTCGCGGGTCTGAACCACCTGCATTGCAGCG‑CGGGCTTCACGACCTTTCTTGCCGAACAGCTTTCCAAGCATGGGGTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGgt                                                                                                                                                      <  7:253550/149‑1 (MQ=255)   ccaggcgccgagttaatccggcgattgagttctggtggacgttacgcaacgtagcaagcttcctcgctcgacatgtcggcccgcaggcttgctgagcaacaccGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGgt                                                                                                                                                      >  1:153901‑M1/104‑149 (MQ=255)    caggcgccgagttaatccggcgattgagttctggtggacgttacgcaacgtagcaagcttcctcgctcgacatgtcggcccgcaggcttgctgagcaacaccGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGgtg                                                                                                                                                     >  8:53579‑M1/103‑149 (MQ=255)     aggcgccgagttaatccggcgattgagttctggtggacgttacgcaacgtagcaagcttcctcgctcgacatgtcggcccgcaggcttgctgagcaacaccGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGgtgt                                                                                                                                                    >  8:177178‑M1/102‑149 (MQ=255)      aTCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCGTCGGGCTTCACGACCTTTATTGCCGAACAGTTTTCCATGCATGGGGTGTT‑GATCCGTGGGGTTGATTTCCCTTCTGGCCATGTTGCCAAGGCCAGCAAGTGAAATCGGTGTTg                                                                                                                                                  >  1:63534/1‑149 (MQ=255)      aTCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCG‑CGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGc                                                                                                                                                 >  3:313077/1‑149 (MQ=255)       tCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCG‑CGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCt                                                                                                                                                >  6:138027/1‑149 (MQ=255)         aGGTCGCGGTTCTGAACCACCTGCATTGCAGCG‑CGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTc                                                                                                                                               <  4:150492/148‑1 (MQ=255)           gTCGCGGTTCTGAACCACCTGCATTGCAGCG‑CGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAg                                                                                                                                             >  1:380189/1‑148 (MQ=255)            tCGCGGTTCTGAACCACCTGCATTGCAGCG‑CGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCa                                                                                                                                           <  7:234306/149‑1 (MQ=255)                  ttCTTAACCACCTGCATTGCAGCG‑CGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTg                                                                                                                                     >  5:31784/1‑149 (MQ=255)                       aaCCACCTGCATTGCAGCG‑CGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCggg                                                                                                                                 <  7:44229/148‑1 (MQ=255)                         ccaccTGCATTGCAGCG‑CGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCg                                                                                                                              <  4:332133/149‑1 (MQ=255)                                 aTTGCAGCG‑CGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTc                                                                                                                       >  2:107930/1‑148 (MQ=255)                                    gCAGCG‑CGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTcgag                                                                                                                    <  1:310916/148‑1 (MQ=255)                                     cAGCG‑CGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTcgagc                                                                                                                   <  8:206320/148‑1 (MQ=255)                                      aGCG‑CGTGCTTCAGGAACTTTCTTGCCGAACCGTTTTCCAAGCATGGGGTGTT‑GCTCCTTGGGGTTGATTTCCCGTCTGTCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTcgagcga                                                                                                                 <  5:207009/149‑1 (MQ=21)                                      aGCG‑CGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGGGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTcgagcga                                                                                                                 <  4:68223/149‑1 (MQ=255)                                           cgGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGaa                                                                                                             <  5:138027/149‑1 (MQ=255)                                               cTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCtt                                                                                                         <  5:1232/149‑1 (MQ=255)                                                ttCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCtt                                                                                                         >  4:259344/1‑148 (MQ=255)                                                  cACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGgt                                                                                                                                                      <  2:334773/101‑1 (MQ=255)                                                  cACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGgt                                                                                                                                                      >  1:334773/1‑101 (MQ=255)                                                   aCGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTa                                                                                                     >  7:190233/1‑149 (MQ=255)                                                   aCGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTa                                                                                                     >  3:298559/1‑149 (MQ=255)                                                     gACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGAGTA‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCACGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACg                                                                                                   >  6:222654/1‑149 (MQ=255)                                                       ccTTTCTTGCCGAACCGTCTTCCAAGCATGGGGGGGT‑GCTCCGTGGGGTGGCTTTCCCGGCTGGCCCTGCTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGtt                                                                                                 <  6:373223/149‑1 (MQ=18)                                                        cTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTg                                                                                                <  2:176348/149‑1 (MQ=255)                                                         tttCTTGCCGAACAGTTTTCCAAGCATGGGGTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGGGCAATCGGGGTTGCTCCGCACGCCTGCgg                                                                                                                                  >  6:111407/1‑114 (MQ=25)                                                                 cGAACAGTTTTCCAAGCATGGGGTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTc                                                                                       >  4:120566/1‑149 (MQ=255)                                                                  gAACAGTTTTCCAAGCATGGGGTGTTGGCTCCGTGGGGTTCATTACCCGACTGGCCCTTTTGCCATGGCCACCCAGTGAAATCGGTGTTGCTCAGCAACCCTGCGGCCCTCAATGACCAGCGCGGAACATTGATACGTTGCGTAACGTc                                                                                       >  1:210547/1‑149 (MQ=255)                                                                    aCAGTTTTCCAAGCATGGGGTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTcca‑‑c                                                                                  <  5:307318/149‑1 (MQ=255)                                                                    aCAGTTTTCCAAGCATGGGGTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTcca‑‑c                                                                                  <  2:43678/149‑1 (MQ=255)                                                                       gTTTTCCAAGCATGGGGTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAg                                                                               <  8:190233/149‑1 (MQ=255)                                                                          ttCCAAGCATGGGGTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGaa                                                                             <  1:60771/148‑1 (MQ=255)                                                                          ttCCAAGCATGGGGTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGaa                                                                             <  3:259344/148‑1 (MQ=255)                                                                           tCCAAGCATGGGGTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTGAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGAAc                                                                            <  2:210547/148‑1 (MQ=255)                                                                              aaGCATGGGGTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGGACTCaa                                                                        >  1:24988/1‑149 (MQ=255)                                                                                gCATGGGGTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGAACTCAATc                                                                      >  1:124035/1‑149 (MQ=255)                                                                                  aTGGGGTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGgtgt                                                                                                                                                    >  3:193980/1‑71 (MQ=255)                                                                                  aTGGGGTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGgtgt                                                                                                                                                    <  4:193980/71‑1 (MQ=255)                                                                                    ggggTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGAACTCAATCGCCg                                                                  >  1:190021/1‑149 (MQ=255)                                                                                       gtgtT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCTAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGAACTCAATCGCCGGAt                                                               >  7:89801/1‑149 (MQ=255)                                                                                       gtgtT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGAACTCAATCGCCGGAt                                                               <  2:63534/149‑1 (MQ=255)                                                                                       gtgtT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGAACTCAATCGCCGGAt                                                               <  4:313077/149‑1 (MQ=255)                                                                                             gCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGAACTCAATCGCCGGATTAAc                                                           <  4:76611/148‑1 (MQ=255)                                                                                                     acaccgatttcactggctggccttggcaacagggccagacgggaaatcGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGAACTCAATCGCCGGATTAACTCGGCGCCt                                                  >  8:177178‑M2/49‑149 (MQ=255)                                                                                                      caccgatttcactggctggccttggcaacagggccagacgggaaatcGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGAACTCAATCGCCGGATTAACTCGGCGCCtg                                                 >  8:53579‑M2/48‑149 (MQ=255)                                                                                                       gTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGAACTCAATCGCCGGATTACCTCGGCGCCtgg                                                >  8:254534/1‑149 (MQ=255)                                                                                                       gTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGAACTCAATCGCCGGATTAACTCGGCGCCtgg                                                >  5:135278/1‑149 (MQ=255)                                                                                                       accgatttcactggctggccttggcaacagggccagacgggaaatcGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGAACTCAATCGCCGGATTAACTCGGCGCCtgg                                                >  1:153901‑M2/47‑149 (MQ=255)                                                                                                        ttGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGAACTCAATCGCCGGATTAACTCGGCGCCtggt                                               >  5:132779/1‑149 (MQ=255)                                                                                                        ttGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGAACTCAATCGCCGGATTAACTCGGCGCCtggt                                               <  2:380189/149‑1 (MQ=255)                                                                                                           ATTTCCCGTCTGGCCCTGTTGCCAAGGACAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGAACTCAATCGCCGGATTAACTCGGCGCCtggtgg                                             >  3:279687‑M1/1‑148 (MQ=255)                                                                                                             TTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGAACTCAATCGCCGGATTAACTCGgcgc                                                    >  3:221747‑M1/1‑139 (MQ=255)                                                                                                             TTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGAACTCAATCGCCGGATTAACTCGgcgc                                                    >  3:216802‑M1/1‑139 (MQ=255)                                                                                                             TTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGAACTCAATCGCCGGATTAACTCGgcgc                                                    <  4:216802‑M1/139‑1 (MQ=255)                                                                                                             TTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGAACTCAATCGCCGGATTAACTCGgcgc                                                    <  4:221747‑M1/139‑1 (MQ=255)                                                                                                              TCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAACTCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGaa                                                                             >  6:385486‑M1/1‑113 (MQ=255)                                                                                                               CCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCAt                                        <  2:203184‑M1/149‑1 (MQ=255)                                                                                                                ccGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCAt                                        <  6:132779/148‑1 (MQ=255)                                                                                                                 cGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTcca‑‑c                                                                                  >  8:299481/1‑105 (MQ=255)                                                                                                                 cGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTcca‑‑c                                                                                  <  7:299481/105‑1 (MQ=255)                                                                                                                  gTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACa                                                                                                                           >  5:57088/1‑65 (MQ=255)                                                                                                                  gTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACa                                                                                                                           <  6:57088/65‑1 (MQ=255)                                                                                                                          cTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGtttt                             <  8:302565/149‑1 (MQ=255)                                                                                                                            gTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGttttt                            >  3:191217/1‑148 (MQ=255)                                                                                                                              gcaacagggccagacgggaaatcGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTaaa                         <  2:153901‑M2/126‑1 (MQ=255)                                                                                                                                ccAAGGCCATGCATTTTAATCGGTGGTGCTCCTCAAGCCTGCGGGCCGTCATGTCGATCGATGTATCCTGCTTAGTTTCGTAACGTCCACCCCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTaa                          <  1:107930/148‑1 (MQ=12)                                                                                                                                    ggCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCgg                   >  6:90076/1‑149 (MQ=255)                                                                                                                                            agTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTgg                                 >  5:178963/1‑127 (MQ=255)                                                                                                                                            agTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTgg                                 <  6:178963/127‑1 (MQ=255)                                                                                                                                             gTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCg          >  6:148168/1‑149 (MQ=255)                                                                                                                                                 aatcGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAATGTCCA‑‑CCAGAACTCAATCGCCGGATTAACTCGGCGCCGGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGc      >  4:305434‑M2/5‑149 (MQ=255)                                                                                                                                                    cGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGc   >  6:101031‑M2/2‑149 (MQ=255)                                                                                                                                                     ggTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGGACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGcc  <  2:24988/149‑1 (MQ=255)                                                                                                                                                     ggTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGc   <  2:190021/148‑1 (MQ=255)                                                                                                                                                     ggTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGc   <  3:218270/148‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                       CCTGCATCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCG‑CGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTT‑GCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCA‑‑CCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGCC  >  NC_002947/1748586‑1748880

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.