New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2911602	46 (0.720)	3 (0.050)	3/258	NT	6.1%	coding (622/10827 nt)	PP_2561	hemolysin‑type calcium‑binding bacteriocin
	?	NC_002947	= 2911641	47 (0.760)					coding (661/10827 nt)	PP_2561	hemolysin‑type calcium‑binding bacteriocin

TTCATCCCGCTGCGCCCGGACGACCCTCTGTTCGTGGCCGGCAGCCCGACCAACTTCATGGTGCTGTCCCGC‑GCCGTGCGCACCGC‑CGGCGCCGATGGCGTGGTGGGTACCGCCGACGATAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACAGTTCACATCCCTCGCACCAGGTGTTCCTGCGCGAATACACGGTCAACGCCGCAGGTGACCCGGTGGCTACCGGGCGCCTGATCACCAACCGTGATCTGGGCGCCGATGGCAAGTTC  >  NC_002947/2911503‑2911787                                                                                                                                             |                                                                                                                                                   ttCATCCCGCTGCGCCCGGACGACCCTCTGTTCGTGGCCGGCAGCCCGACCAACTTCATGGTGCTGTCCCGC‑GCCGTGCGCACCGC‑CGGCGCCGATGGCGTGGTGGGTACCGCCGACGATAGCCAGCCCAACACCACCTCGCCCTtcgt                                                                                                                                          >  8:157932/1‑149 (MQ=255)      cccGCTGCGCCCGGACGACCCTCTGTTCGTGGCCGGCAGCCCGACCAACTTCATGGTGCTGTCCCGC‑GCCGTGCGCACCGC‑CGGCGCCGATGGCGTGGTGGGTACCGCCGACGATAGCCAGCCCAACACCACCTCGCCCTTCGTCGAc                                                                                                                                      >  5:19455/1‑148 (MQ=255)        cGCTGCGCCCGGACGACCCTCTGTTCGTGGCCGGCAGCCCGACCAACTTCATGGTGCTGTCCCGC‑GCCGTGCGCCCCGC‑CGGCGCCGATGGCGTGGTGGGTACCGCCGACGATAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCag                                                                                                                                   >  7:130623/1‑149 (MQ=255)           tGCGCCCGGACGACCCTCTGTTCGTGGCCGGCAGCCCGACCAACTTCATGGTGCTGTCCCGC‑GCCGTGCGCACCGC‑CGGCGCCGATCGCGTGGTGGGTACCCCCGACGATAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCAGAGc                                                                                                                                >  2:326474/1‑149 (MQ=255)             cgcCCGGACGACCCTCTGTTCGTGGCCGGCAGCCCGACCAACTTCATGGTGCTGTCCCGC‑GCCGTGCGCACCGC‑CGGCGCCGATGGCGTGGTGGGTACCGCCGACGATAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCAGAGc                                                                                                                                <  3:134788/147‑1 (MQ=255)                   gacgacCCTCTGTTCGTGGCCGGCAGCCCGACCAACTTCATGGTGCTGTCCCGC‑GCCGTGCGCACCGC‑CGGCGCCGATGGCGTGGTGGGTACCGCCGACGATAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTa                                                                                                                        <  6:19455/149‑1 (MQ=255)                      gacCCTCTGTTCGTGGCCGGCAGCCCGACCAACTTCATGGTGCTGTCCCGC‑GCCGTGCGCACCGC‑CGGCGCCGATGGCGTGGTGGGTACCGCCGACGATAGCCAGCCCAACACCACCTCGCCCTtc                                                                                                                                            <  1:234324/126‑1 (MQ=255)                      gacCCTCTGTTCGTGGCCGGCAGCCCGACCAACTTCATGGTGCTGTCCCGC‑GCCGTGCGCACCGC‑CGGCGCCGATGGCGTGGTGGGTACCGCCGACGATAGCCAGCCCAACACCACCTCGCCCTtc                                                                                                                                            >  2:234324/1‑126 (MQ=255)                        cccTCTGTTCGTGGCCGGCAGCCCGACCAACTTCATGGTGCTGTCCCGC‑GCCGTGCGCACCGC‑CGGCGCCGATGGCGTGGTGGGTACCGCCGACGATAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACAGtt                                                                                                                   <  7:293109/149‑1 (MQ=255)                         ccTCTGTTCGTGGCCGGCAGCCCGACCAACTTCATGGTGCTGTCCCGC‑GCCGTGCGCACCGC‑CGGCGCCGATGGCGTGGTGGGTACCGCCGACGATAGCCGGCCCAACCCCACGACGCCCTTCGTCGAGCCGAGCCCGACCTCGAGtt                                                                                                                   >  6:229249/1‑148 (MQ=255)                         ccTCTGTTCGTGGCCGGCAGCCCGACCAACTTCATGGTGCTGTCCCGC‑GCCGTGCGCACCGC‑CGGCGCCGATGGCGTGGTGGGTACCGCCGACGATAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACAGtt                                                                                                                   >  4:349579/1‑148 (MQ=255)                         ccTCTGTTCGTGGCCGGCAGCCCGACCAACTTCATGGCGCTGTCCCGC‑GCCGTGCGCACCGC‑CGGCGCCGATGGCGTGGTGGGTACCGCCGACGATAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACAGtt                                                                                                                   >  2:125942/1‑148 (MQ=255)                               ttCGTGGCCGGCAGCCCGACCAACTTCATGGTGCTGTCCCGC‑GCCGTGCGCACCGC‑CGGCGCCGATGGCGTGGTGGGTACCGCCGACGATAGCCAGCCCAACACCCCCTCGCCCTTCGTCGACCAGAGCCAGACCTACAGTTCACATcc                                                                                                            >  3:7488/1‑149 (MQ=255)                                  gTGGCCGGCAGCCCGACCAACTTCATGGTGCTGTCCCGC‑GCCGTGCGCACCGC‑CGGCGCCGATGGCGTGGTGGGTACCGCCGACGATAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACAGTTCACATCCCTc                                                                                                         <  3:349579/149‑1 (MQ=255)                                       cGGCAGCCCGACCAACTTCATGGTGCTGTCCCGC‑GCCGTGCGCACCGCGCGGCGCCGATGGCGTGGTGGGTACCGCCGACGATAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACATTTCACATCCCTCGCAc                                                                                                     >  1:91963/1‑149 (MQ=255)                                          cAGCCCGACCAACTTCATGGTGCTGTCCCGC‑GCCGTGCGCACCGC‑CGGCGCCGATGGCGTGGTGGGTACCGCCGACGATAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACAGTTCACATCCCTCGCACCAgg                                                                                                 <  7:157932/149‑1 (MQ=255)                                             cccGACCAACTTCATGGTGCTGTCCCGCGGCCGTGCGCACCGC‑CGGCGCCGATGGCGTGGTGGGTACCGCCGACGATAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACAGTTCACATCCCTCGCACCAGgtg                                                                                               >  1:22590/1‑149 (MQ=255)                                             cccGACCAACTTCATGGTGCTGTCCCGC‑GCCGTGCGCACCGC‑CGGCGCCGATGGCGTGGTGGGTACCGCCGACGATAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACAGTTCACATCCCTCGCACCAGgtgt                                                                                              <  8:3709/149‑1 (MQ=255)                                                   cAACTTCATGGTGCTGTCCCGC‑GCCGTGCGCACCGC‑CGGCGCCGATGGCGTGGTGGGTACCGCCGACGATAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACAGTTCACATCCCTCGCACCAGGTGTTCCTgc                                                                                        <  4:7488/149‑1 (MQ=255)                                                     aCTTCATGGTGCTGTCCCGC‑GCCGTGCGCACCGC‑CGGCGCCGATGGCGTGGTGGGTACCGCCGACGATAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACAGTTCACATCCCTCGCACCAGGTGTTCCTgcgc                                                                                      <  2:121941/149‑1 (MQ=255)                                                       ttCATGGTGCTGTCCCGC‑GCCGTGCGCACCGC‑CGGCGCCGATGGCGTGGTGGGTACCGCCGACGATAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACAGTTCACATCCCTCGCACCAGGTGTTCCTGcgcg                                                                                     >  8:25818/1‑148 (MQ=255)                                                       ttCATGGTGCTGTCCCGC‑GCCGTGCGCACCGC‑CGGCGCCGATGGCGTGGTGGGTACCGCCGACGATAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCGACAGTGAACATCCCTCGCACCAGGTGTTCCTGcgcg                                                                                     >  1:302341/1‑148 (MQ=255)                                                         cATGGCGCTGTCCCGC‑GCCGTGCGCACCGC‑CGGCGCCGATGGCGTGGTGGGTACCGCCGACGATAGCCACCCCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACAGTTCACATCCCTCGCACCAGGTGTTCCTGCGCGa                                                                                    <  1:125942/147‑1 (MQ=255)                                                             gTGCTGTCCCGC‑GCCGTGCGCAGCGC‑CGGCGCCGATGGCGTGGTGGGTAGCGCCGACGATAGCCAGCCCTACACCACCTCGCCCTTCGTCGACGAGAGCCAGACCTACAGTTCACATCCCTCGCACCAGGTGTTCCTGCGCGAATaca                                                                               <  1:326474/148‑1 (MQ=255)                                                             gTGCTGTCCCGC‑GCCGTGCGCACCGC‑CTGCGCCGATGGCGGGGTGGGAACCGCCGACGATAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACAGTTCACATCCCTCGCACCAGGTGTTCCTGCGCGAATaca                                                                               <  4:295445/148‑1 (MQ=255)                                                               gCTGTCCCGC‑GCCGTGCGCACCGC‑CGGCGCCGATGGCGTGGTGGGTACCGCCGACGATAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACAGTTCACATCCCTCGCACCAGGTGTTCCTGCGCGAATACACgg                                                                            >  3:366236/1‑149 (MQ=255)                                                                cTGTCCCGC‑GCCGTGCGCACCGC‑CGGCGCCGATGGCGTGGTGGGTACCGCCGACGATAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACa                                                                                                                      >  7:102901/1‑106 (MQ=255)                                                                cTGTCCCGC‑GCCGTGCGCACCGC‑CGGCGCCGATGGCGTGGTGGGTACCGCCGACGATAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACa                                                                                                                      <  8:102901/106‑1 (MQ=255)                                                                 ccatccGC‑GCCGTGCGCACCGC‑CGGCGCCGATGGCGTGGTGGGTACCGCCGACGATAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACAGTTCACATCCCTCGCACCAGGTGTTCCTGCGCGAATACACGGTc                                                                          <  1:260162/145‑1 (MQ=255)                                                                   tCCCGC‑GCCGTGCGCACCGC‑CGGCGCCGATGGCGTGGTGGGTACCGCCGACGATAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACAGTTCACATCCCTCGCACCAGGTGTTCCTGCGCGAATACACGGTc                                                                          <  2:11111/147‑1 (MQ=255)                                                                           ccGTGCGCAGCGC‑CGGGGCCGATGGCGTGGTGGGTACCGCCGACGATAGCCAGCCGAACAGCTCCTCGCCCTTCGTCGACCAGAGCCAGACCTACAGTTCACATCCCTCGCACCAGGTGTTCCTGCGCGAATACACGGTCAACGCCGCa                                                                 <  6:41816/149‑1 (MQ=38)                                                                            cGTGCGCACCGC‑CGGCGCCGATGGCGTGGTGGGTACCGCCGACGATAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACAGTTCACATCCCTCGCACCAGGTGTTCCTGCGCGAATACACGGTCAACGCCGCAg                                                                <  2:22590/149‑1 (MQ=255)                                                                                   aCCGC‑CGGCGCCGATGGCGTGGTGGGTACCGCCGACGATAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACAGTTCACATCCCTCGCACCAGGTGTTCCTGCGCGAATACACGGTCAACGCCGCAGGTGAccc                                                         >  3:142831/1‑149 (MQ=255)                                                                                      gc‑cgGCGCCGATGGCGTGGTGGGTACCGCCGACGATAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACAGTTCACATCCCTCGCACCAGGTGTTCCTGCGCGAATACACGGTCAACGCCGCAGGTGACCCGGt                                                      <  4:366236/149‑1 (MQ=255)                                                                                       ggcgGAGCCGTTGGCGTGGGGGGTACCGCCGACGATAGCCAGGCCAACACCACCTCGCCCTTCGTCGAGCAGAGCCAGACCTACAGTTCACATGCCTGGCACCAGGTGTTCCTGCGCGAATACACGGTCAACGCCGCAGGTGACCCGGt                                                      <  6:338339/147‑1 (MQ=37)                                                                                               cGATGGCGTGGTGGGTACCGCCGACGATAGCCAGCCCAACACCACCTcgccatcggcgccggcggtgcgcacggcgcgggacagcaccatgaagttggtcgggctgccggccacgaacagagggtcgtccgggcgcagcgggatgaa                                                <  4:353433‑M2/147‑101 (MQ=255)                                                                                               cGATGGCGTGGTGGGTACCGCCGACGATAGCCAGCCCAACACCACCTcgccatcggcgccggcggtgcgcacggcgcgggacagcaccatgaagttggtcgggctgccggccacgaacagagggtcgtccgggcgcagcgggatgaa                                                >  3:353433‑M2/1‑47 (MQ=255)                                                                                                gATGGCGTGGTGGGTACCGCCGACGATAGCCAGCCCAACACCACCTcgccatcggcgccggcggtgcgcacggcgcgggacagcaccatgaagttggtcgggctgccggccacgaacagagggtcgtccgggcgcagcgggatgaacac                                             <  5:57772‑M2/149‑104 (MQ=255)                                                                                                gATGGCGTGGTGGGTACCGCCGACGATAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACAGTTCACATCCCTCGCACCAGGAGTTCCTGCGCGAATACACGGTCAACGCCGCAGGTGACCCGGTGGCTACCgg                                             >  6:360893/1‑149 (MQ=255)                                                                                                        ggtggGTACCGCCGACGATAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACAGTTCACATCCCTCGCACCAGGTGTTCCTGCGCGAATACACGGTCAACGCCGCAGGTGACCCGGTGGCTACCGGGCGCCTg                                      >  3:269852/1‑148 (MQ=255)                                                                                                            ggTACCGCCGACGATAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACAGTTCACATCCCTCGCACCAGGTGTTCCTGCGCGAATACACGGTCAACGCCGCAGGTGACCCGGTGGCTACCGGGCGCCTGATCa                                  <  7:273532/148‑1 (MQ=255)                                                                                                            ggTACCGCCGACGATAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACAGTTCACATCCCTCGCACCAGGTGTTCCTGCGCGAATACACGGTCAACGCCGCAGGTGACCCGGTGGCTACCGGGCGCCTGATCa                                  >  8:273532/1‑148 (MQ=255)                                                                                                                ccgccgACGATAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACAGTTCACATCCCTCGCACCAGGTGTTCCTGCGCGAATACACGGTCAACGCCGCAGGTGACCCGGTGGCTACCGGGCGCCTGATCACCAAc                             <  8:130623/149‑1 (MQ=255)                                                                                                                   ccgACGATAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACAGTTCACATCCCTCGCACCAGGTGTTCCTGCGCGAATACACGGTCAACGCCGCAGGTGACCCGGTGGCTACCGGGCGCCTGATCACCAACCGt                          >  1:385523/1‑149 (MQ=255)                                                                                                                        gaTAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACAGTTCACATCCCTCGCACCAGTTGTTCCTGCGCGAATACACGGTCAACGCCGCAGGTGACCCGGTGGCTACCGGGCGCCTGATCACCAACCGTGATCt                     >  6:15745/1‑149 (MQ=255)                                                                                                                         aTAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACATTTCACATCCCTCGCACCAGGTGTTCCTGCGCGAATACACGGTCAACGCCGCAGGTGACCCGGTGGCTACCGGGCGCCTGATCACCAACCGTGATCTg                    <  2:91963/149‑1 (MQ=255)                                                                                                                          tAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACAGTTCACATCCCTCGCACCAGGTGTTCCTGCGCGAATACACGGTCAACGCCGCAGGTGACCCGGTGGCTACCGGGCGCCTGATCACCAACCGTGATCTgg                   >  3:354271/1‑149 (MQ=255)                                                                                                                              cagccCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACAGTTCACATCCCTCGCACCAGGTGTTCCTGCGCGAATACACGGTCAACGCCGCAGGTGACCCGGTGGCTACCGGGCGCCTGATCACCACCCGTGATCTGGgcgc               >  1:49560/1‑149 (MQ=255)                                                                                                                              cagccCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACAGTTCACATCCCTCGCACCAGGTGTTCCTGCGCGAATACACGGTCAACGCCGCAGGTGACCCGGTGGCTACCGGGCGCCTGATCACCAACCGTGATCTGGgcgc               >  3:60287/1‑149 (MQ=255)                                                                                                                                gccCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACAGTTCACATCCCTCGCACCAGGTGTTCCTGCGCGAATACACGGTCAACGCCGCAGGTGACCCGGTGGCTACCGGGCGCCTGATCACCAACCGTGATCTGGGCGcc              >  6:78424/1‑148 (MQ=255)                                                                                                                                  ccAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACAGTTCACATCCCTCGCACCAGGTGTTCCTGCGCGAATACACGGTCAACGCCGCAGGTGACCCGGTGGCTACCGGGCGCCTGATCACCAACCGTGATCTGGGCGCCGAt           >  1:59840/1‑149 (MQ=255)                                                                                                                                    aaCACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACAGTTCACATCCCTCGCACCAGGTGTTCCTGCGCGAATACACGGTCAACGCCGCAGGTGACCCGGTGGCTACCGGGCGCCTGATCACCAACCGTGATCTGGGCGCCGATgg         <  4:142831/149‑1 (MQ=255)                                                                                                                                           ccTCGCCCTTCGTCGACCAGAGCCAGACCTACAGTTCACATCCCTCGCACCAGGTGTTCCTGCGCGAATACACGGTCAACGCCGCAGGTGACCCGGTGGCTACCGGGCGCCTGATCACCAACCGTGATCTGGGCGCCGATGGCAAGTTc  >  8:272093/1‑149 (MQ=255)                                                                                                                                             |                                                                                                                                                   TTCATCCCGCTGCGCCCGGACGACCCTCTGTTCGTGGCCGGCAGCCCGACCAACTTCATGGTGCTGTCCCGC‑GCCGTGCGCACCGC‑CGGCGCCGATGGCGTGGTGGGTACCGCCGACGATAGCCAGCCCAACACCACCTCGCCCTTCGTCGACCAGAGCCAGACCTACAGTTCACATCCCTCGCACCAGGTGTTCCTGCGCGAATACACGGTCAACGCCGCAGGTGACCCGGTGGCTACCGGGCGCCTGATCACCAACCGTGATCTGGGCGCCGATGGCAAGTTC  >  NC_002947/2911503‑2911787

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.