New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3008739 =	41 (0.650)	3 (0.050)	3/254	NT	6.7%	coding (356/1977 nt)	PP_2628	ABC transporter ATP‑binding protein
	?	NC_002947	3008793 =	44 (0.730)					coding (302/1977 nt)	PP_2628	ABC transporter ATP‑binding protein

CACCTGGTGCTGAACCATGGTGCGCAGCGCCACCAGCCCGATGCTGACCACCAGGACGATGCCGATCCCCCACAGCACACGGCTTTCCTCGGGGCCAACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGAGCAGCGCCAGCGCCAGGATGTAGCCACGGGCGCCGCGGGTACAAGCCCACATGAAGCGCAACAGGCCAACGGGCGGCGGTGGTACCTCGTCGGGTGGGAAG  >  NC_002947/3008648‑3008939                                                                                                                                                  |                                                                                                                                                   cttgtacccgcggcgcccgtggctacatcctggcgctggcgctgctcagtgccggggtgtcgatatacgaagcctggctattcgcgttcctGGGCCAACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGa                                                                                                                                                 >  7:170091‑M1/92‑149 (MQ=255)    gtacccgcggcgcccgtggctacatcctggcgctggcgctgctcagtgccggggtgtcgatatacgaagcctggctattcgcgttcctGGGCCAACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAAc                                                                                                                                               >  8:116694‑M1/89‑148 (MQ=255)     tGGTGCTGAACCATGGTGCGCAGCGCCACCAGCCCGATGCTGACCACCAGGACGATGCCGATCCCCCACAGCACACGGCTTTCCTCGGGGCCAACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAAcgc                                                                                                                                             >  5:83791/1‑149 (MQ=255)        tGCTGAACCATGGTGCGCAGCGCCACCAGCCCGATGCTGACCACCAGGACGATGCCGATCCCCCACAGCACACGGCTTTCCTCGGGGCCAACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGaa                                                                                                                                          <  6:113454/149‑1 (MQ=255)        tGCTGAACCATGGTGCGCAGCGCCACCAGCCCGATGCTGACCACCAGGACGATGCCGATCCCCCACAGCACACGGCTTTCCTCGGGGCCAACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGaa                                                                                                                                          >  2:389031/1‑149 (MQ=255)             aaCCATGGTGCGCAGCGCCACCAGCCCGATGCTGACCACCAGGACGATGCCGATCCCCCACAGCACACGGCTTTCCTCGGGGCCAACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAAcg                                                                                                                                              <  8:123699/140‑1 (MQ=255)             aaCCATGGTGCGCAGCGCCACCAGCCCGATGCTGACCACCAGGACGATGCCGATCCCCCACAGCACACGGCTTTCCTCGGGGCCAACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAAcg                                                                                                                                              >  7:123699/1‑140 (MQ=255)               ccATGGTGCGCAGCGCCACCAGCCCGATGCTGACCACCAGGACGATGCCGATCCCCCACAGCACACGGCTTTCCTCGGGGCCAACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAg                                                                                                                                   >  8:199735/1‑149 (MQ=255)                 aTGGTGCGCAGCGCCACCAGCCCGATGCTGACCACCAGGACGATGCCGATCCCCCACAGCACACGGCTTTCCTCGGGGCCAACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAgg                                                                                                                                  >  4:253419/1‑148 (MQ=255)                       cgcAGCGCCACCAGCCCGATGCTGACCACCAGGACGATGCCGATCCCCCACAGCACACGGCTTTCCTCGGGGCCAACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGt                                                                                                                            <  3:253419/148‑1 (MQ=255)                       cgcAGCGCCACCAGCCCGATGCTGACCACCAGGACGATGCCGATCCCCCACAGCACACGGCTTTCCTCGGGGCCAACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGt                                                                                                                            <  1:267233/148‑1 (MQ=255)                        gcAGCGCCACCAGCCCGATGCTGACCACCAGGACGATGCCGATCCCCCACAGCACACGGCTTTCCTCGGGGCCAACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGtat                                                                                                                          <  7:199735/149‑1 (MQ=255)                          aGCGCCACCAGCCCGATGCTGACCACCAGCACGATGCCGATCCCCCACAGCACACGGCTTTCCTCGGGGCCAACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTatat                                                                                                                        <  6:326096/149‑1 (MQ=255)                           gcgcCACCAGCCCGATGCTGACCACCAGGACGATGCCGATCCCCCACAGCACACGGCTTTCCTCGGGGCCAACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATc                                                                                                                       <  6:341561/149‑1 (MQ=255)                             gcCACCAGCCCGATGCTGACCACCAGGACGATGCCGATCCCCCACAGCACACGGCTTTCCTCGGGGCCAACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATCGa                                                                                                                     <  6:92634/149‑1 (MQ=255)                              ccaccaGCCCGATGCTGACCACCAGGACGATGCCGATCCCCCACAGCACACGGCTTTCCTCGGGGCCAACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATCGa                                                                                                                     >  3:387225/1‑148 (MQ=255)                               caccaGCCCGATGCTGACCACCAGGACGATGCCGATCCCCCACAGCACACGGCTTTCCTCGGGGCCAACAGTACAGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATCGaca                                                                                                                   >  3:235920/1‑149 (MQ=255)                                            cTGACCACCAGGACGATGCCGATCCCCCACAGCACACGGCTTTCCTCGGGGCCAACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGag                                                                                                      <  4:148246/149‑1 (MQ=255)                                              gACCACCAGGACGATGCCGATCCCCCACAGCACACGGCTTTCCTCGGGGCCAACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGag                                                                                                      >  1:362182/1‑147 (MQ=255)                                                 caccaGGACGATGCCGATCCCCCACAGCACACGGCTTTCCTCGGGGCCAACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGAGcagcg                                                                                                 <  6:82423/149‑1 (MQ=255)                                                       gACGATGCCGATCCCCCACAGCACACGGCTTTCCTCGGGGCCAACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGAGcagcgccagcg                                                                                           >  4:244151/1‑149 (MQ=255)                                                          gATGCCGATCCCCCACAGCACACGGCTTTCCTCGGGGCCAACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGAGcagcgccagcgc                                                                                          >  8:319373/1‑147 (MQ=255)                                                               cGATCCCCCACAGCACACGGCTTTCCTCGGGGCCAACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGCAACGCGAATAGCCAGGCTTCGTATATCGACACCCAGGCACTGAGAAGCGCCAGCGCCAGGAta                                                                                   >  7:273895/1‑148 (MQ=255)                                                                gATCCCCCACAGCACACGGCTTTCCTCGGGGCCAACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGAGCAGCGCCAGCGCCAGGATg                                                                                   >  6:191818/1‑148 (MQ=255)                                                                  tCCCCCACAGCACACGGCTTTCCTCGGGGCCAACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGAGCAGCGCCAGCGCCAGGATGTAg                                                                                >  8:116462/1‑149 (MQ=255)                                                                     cccACAGCACACGGCTTTCCTCGGGGCCAACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGAGCAGCGCCAGCGCCAGGATGTAGCCa                                                                             >  7:45704/1‑149 (MQ=255)                                                                     cccACAGCACACGGCTTTCCTCGGGGCCAACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGAGCAGCGCCAGCGCCAGGATGTAGCCa                                                                             >  3:260988/1‑149 (MQ=255)                                                                          aGCACACGGCTTTCCTCGGGGCCAACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATAGACACCCCGGCACTGAGCAGCGCCAGCGCCAGGATGTAGCCACGGgc                                                                        >  7:188957/1‑149 (MQ=255)                                                                                   cTTTCCTCGGGGCCAACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGAGCAGCGCCAGCGCCAGGATGTAGCCACGGGCGCCGCGGGt                                                               <  3:244151/149‑1 (MQ=255)                                                                                   cTTTCCTCGGGGCCAACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGAGCAGCGCCAGCGCCAGGATGTAGCCACGGGCGCCGCGGGt                                                               <  7:116462/149‑1 (MQ=255)                                                                                      gttcctgggccaggtggtcgacctgctcgcgtcctggcaggcaggcggtactgttggcccAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGAGCAGCGCCAGCGCCAGGATGTAGCCACGGGCGCCGCGGGTAc                                                             >  8:116694‑M2/61‑148 (MQ=255)                                                                                        tcctgggccaggtggtcgacctgctcgcgtcctggcaggcaggcggtactgttggcccAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGAGCAGCGCCAGCGCCAGGATGTAGCCACGGGCGCCGCGGGTACAAg                                                          >  7:170091‑M2/59‑149 (MQ=255)                                                                                        cTCGGGGCCAACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGAGCAGCGCCAGCGCCAGGATGTAGCCACGGGCGCCGCGGGTACaa                                                           <  1:389031/148‑1 (MQ=255)                                                                                        cTCGGGGCCAACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGAGCAGCGCCAGCGCCAGGATGTAGCCACGGGCGCCGCGGGTACAAg                                                          >  5:145038/1‑149 (MQ=255)                                                                                            GGGCCAACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGAGCAGCGCCAGCGCCAGGATGTAGCCACGGGCGCCGCGGGTACAAGCCca                                                      >  2:362182‑M1/1‑149 (MQ=255)                                                                                              GCCAACAGTACCCCCTGCCTGCCACGACGCGAGCAGGGCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGAGCAGCGCCAGCGCCAGGATGTAGCCACGGGCGCCGCGGGTACAAGCCcaca                                                    >  7:164198‑M1/1‑149 (MQ=255)                                                                                                 AACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGAGCAGCGCCAGCGCCAGGATGTAGCCACGGGCGCCGCGGGTACAAGCCCACATg                                                  <  5:224863‑M1/148‑1 (MQ=255)                                                                                                 AACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGAGCAGCGCCAGCGCCAGGATGTAGCCACGGGCGCCGCGGGTACAAGCCCACATGa                                                 >  5:191818‑M1/1‑149 (MQ=255)                                                                                                  aCAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGAGCAGCGCCAGCGCCAGGATGTAGCCACGGGCGCCGCGGGTACAAGCCCACATGaa                                                <  4:235920/149‑1 (MQ=255)                                                                                                   gtggtcgacctgctcgcgtcctggcaggcaggcggtactgttggcccAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGAGCAGCGCCAGCGCCAGGATGTAGCCACGGGCGCCGCGGGTACAAGCCCACATGAAg                                               <  7:116694‑M2/102‑1 (MQ=255)                                                                                                      tACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGAGCAGCGCCAGCGCCAGGATGTAGCCACGGGCGCCGCGGGTACAAGCCCACATGAAgcgc                                            <  4:387225/149‑1 (MQ=255)                                                                                                      tACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGAGCAGCGCCAGCGCCAGGATGTAGCCACGGGCGCCGCGGGTACAAGCCCACATGAAgcg                                             >  8:102880/1‑148 (MQ=255)                                                                                                         cGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGAGCAGCGCCAGCGCCAGGATGTAGCCACGGGCGCCGCGGGTACAAGCCCACATGAAGCGCaa                                          >  7:240143/1‑148 (MQ=255)                                                                                                         cGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGAGCAGCGCCAGCGCCAGGATGTAGCCACGGGCGCCGCGGGTACAAGCCCACATGAAGCGCaa                                          <  8:240143/148‑1 (MQ=255)                                                                                                                   ccAGGACTCGAGCAGGTCCACCACCTGGCCCAGGAACGCGAATAGCCAGGATTAGTATATCGACACCACGGCACTGAGCAGCGCCCGCTCCAGGATGTAGCCACGGGCGCCGCGGGTACAAGCCCACATGAAGCGCAACAGGCCAAAgg                               >  8:165153/1‑149 (MQ=255)                                                                                                                   ccAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGAGCAGCGCCAGCGCCAGGATGTAGCCACGGGCGCCGCGGGTACAAGCCCACATGAAGCGCAACAGGCCAACgg                               >  7:150129/1‑149 (MQ=255)                                                                                                                    cAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGAGCAGCGCCAGCGCCAGGATGTAGCCACGGGCGCCGCGGGTACAAGCCCACATGAAGCGCAACAGGCCAACggg                              <  6:83791/149‑1 (MQ=255)                                                                                                                    cAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGAGCAGCGCCAGCGCCAGGATGTAGCCACGGGCGCCGCGGGTACAAGCCCACATGAAGCGCAACAGGCCAACggg                              >  7:49023/1‑149 (MQ=255)                                                                                                                                 ggTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGAGCAGCGCCAGCGCCAGGATGTAGCCACGGGCGCCGCGGGTACAAGCCCACATGAAg                                               >  7:368700/1‑119 (MQ=255)                                                                                                                                 ggTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGAGCAGCGCCAGCGCCAGGATGTAGCCACGGGCGCCGCGGGTACAAGCCCACATGAAg                                               <  8:368700/119‑1 (MQ=255)                                                                                                                                  gTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGAGCAGCGCCAGCGCCAGGATGTAGCCACGGGCGCCGCGGGTACAAGCCCACATGAAGCGCAACAGGCCAACGGGCGGCGGTGGTACCt                >  5:351271/1‑149 (MQ=255)                                                                                                                                    cGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGAGCAGCGCCAGCGCCAGGATGTAGCCACGGGCGCCGCGGGTACAAGCCCACATGAAGCGCAACAGGCCAACGGGCGGCGGTGGTACCtcg              >  5:338649/1‑149 (MQ=255)                                                                                                                                    cGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGAGCAGCGCCAGCGCCAGGATGTAGCCACGGGCGCCGCGGGTACAAGCCCACATGAAGCGCAACAGGCCAACGGGCGGCGGTGGTACCtcg              >  4:179870/1‑149 (MQ=255)                                                                                                                                                ccAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGAGCAGCGCCAGCGCCAGGATGTAGCCACGGGCGCCGCGGGTACAAGCCCACATGAAGCGCAACAGGCCAACGGGCGGCGGTGGTACCTCGTCGGGTGGGAAg  <  8:150129‑M2/147‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                   CACCTGGTGCTGAACCATGGTGCGCAGCGCCACCAGCCCGATGCTGACCACCAGGACGATGCCGATCCCCCACAGCACACGGCTTTCCTCGGGGCCAACAGTACCGCCTGCCTGCCAGGACGCGAGCAGGTCGACCACCTGGCCCAGGAACGCGAATAGCCAGGCTTCGTATATCGACACCCCGGCACTGAGCAGCGCCAGCGCCAGGATGTAGCCACGGGCGCCGCGGGTACAAGCCCACATGAAGCGCAACAGGCCAACGGGCGGCGGTGGTACCTCGTCGGGTGGGAAG  >  NC_002947/3008648‑3008939

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.