New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5745143 | 63 (0.990) | 4 (0.070) | 3/252 | NT | 6.7% | coding (722/2451 nt) | glgP | glycogen phosphorylase |
? | NC_002947 | = 5745173 | 52 (0.860) | coding (692/2451 nt) | glgP | glycogen phosphorylase |
CTCGGTACTGTCGGCGGGGTAAAGCACACGCGAAATGCTCTCGGCACGCGCCACTTCAGCCACAGCCCCCAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAACCGCCCGCACCGTCTCGCCCGGCCACCATACCTGGCGCTGGGTACCGCTTGCATCGTGCACCGTTTCGACACTGCCGCCAAAGCTGATCGGGTAGATCACCTC > NC_002947/5745028‑5745318 | cTCGGTACTGTCGGCGGGGTAAAGCACACGCGAAATGCTCTCGGCACGCGCCACTTCAGCCACAGCCCCCAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGAcgc > 8:305554‑M2/1‑146 (MQ=255) cTCGGTACTGACGGCGGGGTAAAGCACACGCGAAATGCTCTCGGCACGCGCCACTTCAGCCACAGCCCCCAAATGGGCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCTCGCCACAGGCGCAGGGTGTTGAcgc > 8:279519‑M2/1‑146 (MQ=255) ggTACTGTCGGCGGGGTAAAGCACACGCGAAATGCTCTCGGCACGCGCCACTTCAGCCACAGCCCCCAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGAcgctg > 2:40447‑M2/1‑143 (MQ=255) gTACTGTCGGCGGGGTAAAGCACACGCGAAATGCTCTCGGCACGCGCCACTTCAGCCACAGCCCCCAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGAcgctgga > 7:54271‑M2/1‑142 (MQ=255) ggcggGGTAAAGCACACGCGAAATGCTCTCGGCACGCGCCACTTCAGCCACAGCCCCCAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGc < 4:196079/148‑1 (MQ=255) gcggGGTAAAGCACACGCGAAATGCTCTCGGCACGCGCCACTTCAGCCACAGCCCCCAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGc > 6:185096/1‑147 (MQ=255) gggTAAAGCACACGCGAAATGCTCTCGGCACGCGCCACTTCAGCCACAGCCCCCAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGcc > 2:376037/1‑149 (MQ=255) aGCACACGCGAAATGCTCTCGGCACGCGCCACTTCAGCCACAGCCCCCAAATGGTCACCGGCGTTGAAGCGCTACAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTAc > 8:229610/1‑149 (MQ=255) cacaCGCGAAATGCTCTCGGCACGCGCCACTTCAGCCACAGCCCCCAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCg < 6:108245/149‑1 (MQ=255) acGCGAAATGCTCTCGGCACGCGCCACTTCAGCCACAGCCCCCAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCg > 5:352378/1‑149 (MQ=255) gAAATGCTCTCGGCACGCGCCACTTCAGCCACAGCCCCCAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTc < 2:193663/149‑1 (MQ=255) gAAATGCTCTCGGCACGCGCCACTTCAGCCACAGCCCCCAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTc > 5:246990/1‑149 (MQ=255) gAAATGCTCTCGGCACGCGCCACTTCAGCCACAGCCCCCAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTc < 7:60287/149‑1 (MQ=255) gAAATGCTCTCGGCACGCGCCACTTCAGCCACAGCCCCCAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTc < 6:264576/149‑1 (MQ=255) tGCTCTCGGCACGCGCCACTTCAGCCACAGCCCCCAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAg > 4:384636/1‑149 (MQ=255) ggCCCGCGCCACTTCAGCCACAGCCCCCAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGGTGACGCTGGATCCACGCCCGCCGACTACCGGCGTGTCGTAGGCACccg > 2:241823/1‑149 (MQ=255) gcgcCACTTCAGCCACAGCCCCCAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAAccgcccg > 5:161980/1‑148 (MQ=255) aCTTCAGCCACAGCCCCCAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGACGACTACCTGCGTGTCGTAGGCAACCGCCCGCACCGt > 4:71667/1‑149 (MQ=255) cAGCCACAGCCCCCAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAACCGCCCGCACCGtctc < 6:143051/148‑1 (MQ=255) cAGCCACAGCCCCCAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAACCGCCCGCACCGtct < 1:376037/147‑1 (MQ=255) acaGCCCCCAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCCTAGGCAACCGCCCGCACCGACACGCCCgg > 7:177450/1‑149 (MQ=255) ccccAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAAc > 6:51671/1‑123 (MQ=255) ccccAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAAc < 5:51671/123‑1 (MQ=255) cccAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAACCGCCCGCACCGtctc < 1:243439/137‑1 (MQ=255) cccAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAACCGCCCGCACCGtctc > 2:243439/1‑137 (MQ=255) gTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGc > 5:367536/1‑100 (MQ=255) gTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGc < 6:367536/100‑1 (MQ=255) gTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAACCGCCCGCACCGTCTCGCCCGGCCACCATACCTgg < 6:246990/148‑1 (MQ=255) tCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAACCGCCCGCACCGTCTCGCCCGGCCACCATACCTGgcg > 4:351675/1‑149 (MQ=255) ccGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTTGATCCACGCCAGACGACTACCGGCGTGTCGTAGGCAACCGCCCGCACCGTCTCGCCCGGCCACGATACCTGGCGCTg < 2:254168/149‑1 (MQ=255) cGGCATTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAACCGCCCGCACCGTCTCGCCCGGCCACCATACCTGGCGCTgg < 3:314568/149‑1 (MQ=255) gCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAACCGCCCGCACCGTCTCGCCCGGCCACCATACCTGGCGCTggg > 3:119559/1‑148 (MQ=255) gCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAACCGCCCGCACCGTCTCGCCCGGCCACCATACCTGGCGCTGGGt < 8:143080/149‑1 (MQ=255) ttGAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAACCGCCCGCACCGTCTCGCCCGGCCACCATACCTGGCGCTGGGTAcc > 1:13399/1‑149 (MQ=255) gAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAACCGCCCGCACCGTCTCGCCCGGCCACCATACCTGGCGCTGGGTACCg < 4:119559/148‑1 (MQ=255) gAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAACCGCCCGCACCGTCTCGCCCGGCCACCATACCTGGCGCTGGGTACCGc > 8:283719/1‑149 (MQ=255) aGCGCTCCAGGTGCAGCTCTTCCATCCCCCGCGCGCGCCACAGGCCCAGCGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTACGCAACCCACCGCACCGACACCCCCCGCCACCATACCAGCCCCTGCGTACCGCtt > 4:129850/1‑149 (MQ=255) gcgcTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAACCGCCCGCACCGTCTCGCCCGGCCACCATACCTGGCGCTGGGTACCGCTTg > 8:123462/1‑149 (MQ=255) gcTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAACCGCCCGCACCGTCTCGCCCGGCCACCATACCTGGCGCTGGGTACCGCTTGCa < 6:352378/149‑1 (MQ=255) tCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAACCGCCCGCACCGTCTCGCCCGGCCACCATACCTGGCGCTGGGTACCGCTTGCATc > 7:21647/1‑149 (MQ=255) cAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAACCGCCCGCACCGtc < 4:182883/106‑1 (MQ=255) cAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAACCGCCCGCACCGtc > 3:182883/1‑106 (MQ=255) cAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAACCGCCCGCACCGTCTCGCCCGGCCACCATACCTGGCGCTGGGTACCGCTTGCATCGt < 3:384636/149‑1 (MQ=255) gTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAACCGCCCGCACCGTCTCGCCCGGCCACCATACCTGGCGCTGGGTACCGCTTGCATCGTGcc > 6:18803/1‑148 (MQ=255) aGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGAcgctggaagagctgcacctggagcgcttcaacgccggtgaccatttgggggctgtggcagaagtggcgcgtgccgagagcatttcgcgtgtgctttaccccgccga < 2:77579‑M2/149‑107 (MQ=255) gCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGACGACTACCTCCGTGTCGTAGCCAAACGCCCGCACCCTCTCGACAGGCAACCATACCTGGCGCTGGGTACCGCTTGCATCTTGCACCGtt > 6:237814/1‑149 (MQ=255) ctctTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAACCGCCCGCACCGTCTCGCCCGGCCACCATACCTGGCGCTGGGTACCGCTTGCATCGTGCACCGttt > 6:11763/1‑149 (MQ=255) ctctTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAACCGCCCGCACCGTCTCGCCCGGCCACCATACCTGGCGCTGGGTACCGCTTGCATCGTGCACCGttt > 2:127649/1‑149 (MQ=255) ttCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGAcgctggaagagctgcacctggagcgcttcaacgccggtgaccatttgggggctgtggctgaagtggcgcgtgccgagagcatttcgcgtgtgctttaccccgccgaca > 6:42723‑M2/1‑38 (MQ=255) ttCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGAcgctggaagagctgcacctggagcgcttcaacgccggtgaccatttgggggctgtggctgaagtggcgcgtgccgagagcatttcgcgtgtgctttaccccgccgaca < 5:42723‑M2/146‑109 (MQ=255) ttCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAACCGCCCGCACCGTCTCGCCCGGCCACCATACCTGGCGCTGGGTACCGCTTGCATCGTGCACCGTTTc < 2:13399/147‑1 (MQ=255) ttCCAGCGCCCGCCCGCGCCACAGCCGCAGGGTGTTGAcgctggaagagctgcacctggagcgcttcaacgccggtgaccatttgggggctgtggctgaagtggcgcctgccgagagcatttcgagtgtgctttaccccgccgacagta < 7:158590‑M2/149‑112 (MQ=255) ccAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAACCGCCCGCACCGTCTCGCCCGGCCACCATACCTGGCGCTGGGTACCGCTTGCATCGTGCACCGTTTCGaca > 7:170698/1‑149 (MQ=255) gcgcgcCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAACCGCCCGCACCGTCTCGCCCGGCCACCATACCTGGCGCTGGGTACCGCTTGCATCGTGCACCGTTTCGACACTGCCGCCaaa < 8:170698/149‑1 (MQ=255) ggCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAACCGCCCGCACCGTCTCGCCCGGCCACCATACCTGGCGCTGGGTACCGCTTGCATCGTGCACCGTTTCGACACTGCCGCCAAAGCTGATCggg < 7:123462/149‑1 (MQ=255) gcgcAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAACCGCCCGCACCGTCTCGCCCGTCCACCATACCTGGCGCTGGGTACCGCTTGCATCGTTCACCGTTTCGACACTGCCGCCAAAGCTGATCGGGt < 3:129850/149‑1 (MQ=255) gcgcAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAACCGCCCGCACCGTCTCGCCCGGCCAGCATACCTGGCGCTGGGTACCGCTTGCATCGTGCACCGTTTCGACACTGCCGCCAAAGCTGATCGGGt < 3:9484/149‑1 (MQ=255) gcgcAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAACCGCCCGCACCGTCTCGCCCGGCCACCATACCTGGCGCTGGGTACCGCTTGCATCGTGCACCGTTTCGACACTGCCGCCAAAGCTGATCGGGt < 6:161980/149‑1 (MQ=255) aGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAACCGCCCGCACCGTCTCGCCCGGCCACCATACCTGGCGCTGGGTACCGCTTGCATCGTGCACCGTTTCGACACTGCCGCCAAAGCTGATCg < 4:293369/142‑1 (MQ=255) aGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAACCGCCCGCACCGTCTCGCCCGGCCACCATACCTGGCGCTGGGTACCGCTTGCATCGTGCACCGTTTCGACACTGCCGCCAAAGCTGATCg > 3:293369/1‑142 (MQ=255) ttGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAACCGCCCGCACCGTCTCGCCCGGCCACCATACCTGGCGCTGGGTACCGCTTGCATCGTGCACCGTTTCGACACTGCCGCCAAAGCTGATCGGGTAGATCACCTc < 7:283719/149‑1 (MQ=255) | CTCGGTACTGTCGGCGGGGTAAAGCACACGCGAAATGCTCTCGGCACGCGCCACTTCAGCCACAGCCCCCAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGCCCGCGCGCGCCACAGGCGCAGGGTGTTGACGCTGGATCCACGCCAGCCGACTACCGGCGTGTCGTAGGCAACCGCCCGCACCGTCTCGCCCGGCCACCATACCTGGCGCTGGGTACCGCTTGCATCGTGCACCGTTTCGACACTGCCGCCAAAGCTGATCGGGTAGATCACCTC > NC_002947/5745028‑5745318 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |